{"id":"https://openalex.org/W2091723965","doi":"https://doi.org/10.1186/1471-2105-11-229","title":"GOAL: A software tool for assessing biological significance of genes groups","display_name":"GOAL: A software tool for assessing biological significance of genes groups","publication_year":2010,"publication_date":"2010-05-06","ids":{"openalex":"https://openalex.org/W2091723965","doi":"https://doi.org/10.1186/1471-2105-11-229","mag":"2091723965","pmid":"https://pubmed.ncbi.nlm.nih.gov/20459620"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-229","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-229","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-229","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-229","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066354389","display_name":"Alain Tchagang","orcid":"https://orcid.org/0000-0001-8619-9441"},"institutions":[{"id":"https://openalex.org/I197604219","display_name":"National Academies of Sciences, Engineering, and Medicine","ror":"https://ror.org/02eq2w707","country_code":"US","type":"government","lineage":["https://openalex.org/I197604219"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Alain B Tchagang","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON K1A 0R6 Canada. alain.tchagang@nrc-cnrc.gc.ca","Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON K1A 0R6 Canada. alain.tchagang@nrc-cnrc.gc.ca","institution_ids":["https://openalex.org/I197604219"]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084563414","display_name":"Alexander Gawronski","orcid":"https://orcid.org/0000-0002-8068-6422"},"institutions":[{"id":"https://openalex.org/I197604219","display_name":"National Academies of Sciences, Engineering, and Medicine","ror":"https://ror.org/02eq2w707","country_code":"US","type":"government","lineage":["https://openalex.org/I197604219"]},{"id":"https://openalex.org/I4210159778","display_name":"National Research Council Canada","ror":"https://ror.org/04mte1k06","country_code":"CA","type":"government","lineage":["https://openalex.org/I4210159778"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Alexander Gawronski","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","institution_ids":["https://openalex.org/I197604219","https://openalex.org/I4210159778"]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014506447","display_name":"Hugo B\u00e9rub\u00e9","orcid":null},"institutions":[{"id":"https://openalex.org/I197604219","display_name":"National Academies of Sciences, Engineering, and Medicine","ror":"https://ror.org/02eq2w707","country_code":"US","type":"government","lineage":["https://openalex.org/I197604219"]},{"id":"https://openalex.org/I4210159778","display_name":"National Research Council Canada","ror":"https://ror.org/04mte1k06","country_code":"CA","type":"government","lineage":["https://openalex.org/I4210159778"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Hugo B\u00e9rub\u00e9","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","institution_ids":["https://openalex.org/I197604219","https://openalex.org/I4210159778"]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113496151","display_name":"Sieu Phan","orcid":null},"institutions":[{"id":"https://openalex.org/I197604219","display_name":"National Academies of Sciences, Engineering, and Medicine","ror":"https://ror.org/02eq2w707","country_code":"US","type":"government","lineage":["https://openalex.org/I197604219"]},{"id":"https://openalex.org/I4210159778","display_name":"National Research Council Canada","ror":"https://ror.org/04mte1k06","country_code":"CA","type":"government","lineage":["https://openalex.org/I4210159778"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Sieu Phan","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","institution_ids":["https://openalex.org/I197604219","https://openalex.org/I4210159778"]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014709314","display_name":"Fazel Famili","orcid":null},"institutions":[{"id":"https://openalex.org/I197604219","display_name":"National Academies of Sciences, Engineering, and Medicine","ror":"https://ror.org/02eq2w707","country_code":"US","type":"government","lineage":["https://openalex.org/I197604219"]},{"id":"https://openalex.org/I4210159778","display_name":"National Research Council Canada","ror":"https://ror.org/04mte1k06","country_code":"CA","type":"government","lineage":["https://openalex.org/I4210159778"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Fazel Famili","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","institution_ids":["https://openalex.org/I197604219","https://openalex.org/I4210159778"]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019868633","display_name":"Youlian Pan","orcid":"https://orcid.org/0000-0002-0158-0081"},"institutions":[{"id":"https://openalex.org/I197604219","display_name":"National Academies of Sciences, Engineering, and Medicine","ror":"https://ror.org/02eq2w707","country_code":"US","type":"government","lineage":["https://openalex.org/I197604219"]},{"id":"https://openalex.org/I4210159778","display_name":"National Research Council Canada","ror":"https://ror.org/04mte1k06","country_code":"CA","type":"government","lineage":["https://openalex.org/I4210159778"]}],"countries":["CA","US"],"is_corresponding":true,"raw_author_name":"Youlian Pan","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Canada, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada","institution_ids":["https://openalex.org/I197604219","https://openalex.org/I4210159778"]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, National Research Council, Ottawa, Canada","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5019868633","https://openalex.org/A5066354389"],"corresponding_institution_ids":["https://openalex.org/I197604219","https://openalex.org/I4210159778"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.6109,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.82726184,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"11","issue":"1","first_page":"229","last_page":"229"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.0032999999821186066,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.003100000089034438,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6718115210533142},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6024113297462463},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.47562745213508606},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4736705422401428},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.42549729347229004},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4151148796081543},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.39655691385269165},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.37206193804740906},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.22197675704956055},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13093560934066772}],"concepts":[{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6718115210533142},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6024113297462463},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.47562745213508606},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4736705422401428},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.42549729347229004},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4151148796081543},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.39655691385269165},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.37206193804740906},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.22197675704956055},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13093560934066772}],"mesh":[{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-11-229","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-229","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-229","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20459620","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20459620","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:cisti-icist.nrc-cnrc.ca:cistinparc:16352308","is_oa":true,"landing_page_url":"https://nrc-publications.canada.ca/eng/view/object/?id=66c69318-4d50-4931-b7cb-0c53dd27e521","pdf_url":"https://nrc-publications.canada.ca/eng/view/accepted/?id=66c69318-4d50-4931-b7cb-0c53dd27e521","source":{"id":"https://openalex.org/S7407055245","display_name":"NPARC","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:34fbdc4e420d4913b796702fa1b301a0","is_oa":false,"landing_page_url":"https://doaj.org/article/34fbdc4e420d4913b796702fa1b301a0","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 229 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2873542","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2873542","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-229","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-229","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-229","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334601","display_name":"National Research Council Canada","ror":"https://ror.org/04mte1k06"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2091723965.pdf","grobid_xml":"https://content.openalex.org/works/W2091723965.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1955382403","https://openalex.org/W1967145437","https://openalex.org/W1980130378","https://openalex.org/W1988393300","https://openalex.org/W2001781083","https://openalex.org/W2019234246","https://openalex.org/W2026882865","https://openalex.org/W2047364642","https://openalex.org/W2080498142","https://openalex.org/W2084620487","https://openalex.org/W2085675271","https://openalex.org/W2096704019","https://openalex.org/W2102992354","https://openalex.org/W2103017472","https://openalex.org/W2105883975","https://openalex.org/W2118640842","https://openalex.org/W2122683221","https://openalex.org/W2126602684","https://openalex.org/W2133036743","https://openalex.org/W2133271603","https://openalex.org/W2135230352","https://openalex.org/W2135435176","https://openalex.org/W2137683543","https://openalex.org/W2140863273","https://openalex.org/W2141545183","https://openalex.org/W2142460132","https://openalex.org/W2144544802","https://openalex.org/W2147528194","https://openalex.org/W2151337118","https://openalex.org/W2151763757","https://openalex.org/W2153677263","https://openalex.org/W2156095649","https://openalex.org/W2158217645","https://openalex.org/W2159675211","https://openalex.org/W2161594264","https://openalex.org/W2167865654","https://openalex.org/W2171030481","https://openalex.org/W2334543174","https://openalex.org/W4231056502","https://openalex.org/W4242476626","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2415545834","https://openalex.org/W2069695727","https://openalex.org/W1802639773","https://openalex.org/W2118505788","https://openalex.org/W4254166511","https://openalex.org/W2150084125","https://openalex.org/W1542823905","https://openalex.org/W1490878237","https://openalex.org/W2990314835","https://openalex.org/W2131319730"],"abstract_inverted_index":{"BACKGROUND:":[0],"Modern":[1],"high":[2],"throughput":[3],"experimental":[4],"techniques":[5],"such":[6,20,65,241],"as":[7,21,66,152,169,234,242],"DNA":[8],"microarrays":[9],"often":[10],"result":[11],"in":[12,34,38,51,62,153,163,212,221],"large":[13],"lists":[14],"of":[15,101,114,139,198],"genes.":[16],"Computational":[17],"biology":[18,178,239],"tools":[19,240],"clustering":[22,243],"are":[23,41],"then":[24],"used":[25,168,227],"to":[26,133,175,194,228],"group":[27,40,53],"together":[28],"genes":[29,50],"based":[30],"on":[31],"their":[32],"similarity":[33],"expression":[35],"profiles.":[36],"Genes":[37],"each":[39,52],"probably":[42],"functionally":[43],"related.":[44],"The":[45],"functional":[46,99,112,137,189,196],"relevance":[47],"among":[48],"the":[49,98,235],"is":[54],"usually":[55],"characterized":[56],"by":[57],"utilizing":[58],"available":[59,121],"biological":[60],"knowledge":[61],"public":[63],"databases":[64],"Gene":[67,89],"Ontology":[68,90],"(GO),":[69],"KEGG":[70,129],"pathways,":[71],"association":[72,124,127],"between":[73],"a":[74,92,140,170,173,181,188,199],"transcription":[75],"factor":[76],"(TF)":[77],"and":[78,106,109,126,208,216,218,230],"its":[79,118,210,219],"target":[80],"genes,":[81],"and/or":[82],"gene":[83,102,115,141,200,232],"networks.":[84],"RESULTS:":[85],"We":[86,186],"developed":[87,187],"GOAL:":[88],"AnaLyzer,":[91],"software":[93,191],"tool":[94],"specifically":[95],"designed":[96],"for":[97],"evaluation":[100,190],"groups.":[103],"GOAL":[104,160,202,224],"implements":[105],"supports":[107],"efficient":[108],"statistically":[110],"rigorous":[111],"interpretations":[113],"groups":[116,233],"through":[117],"integration":[119],"with":[120,128],"GO,":[122],"TF-gene":[123],"data,":[125],"pathways.":[130],"In":[131],"order":[132],"facilitate":[134],"more":[135],"specific":[136],"characterization":[138,197],"group,":[142],"we":[143],"implement":[144],"three":[145,204],"GO-tree":[146,205],"search":[147,206],"strategies":[148,207],"rather":[149],"than":[150],"one":[151],"most":[154],"existing":[155],"GO":[156],"analysis":[157],"tools.":[158],"Furthermore,":[159,223],"offers":[161,203],"flexibility":[162,220],"deployment.":[164,222],"It":[165],"can":[166,225],"be":[167,226],"standalone":[171],"tool,":[172,192],"plug-in":[174],"other":[176],"computational":[177,238],"tools,":[179],"or":[180],"web":[182],"server":[183],"application.":[184],"CONCLUSION:":[185],"GOAL,":[193],"perform":[195],"group.":[201],"combines":[209],"strength":[211],"function":[213],"integration,":[214],"portability":[215],"visualization,":[217],"evaluate":[229],"compare":[231],"output":[236],"from":[237],"algorithms.":[244]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
