{"id":"https://openalex.org/W2163132655","doi":"https://doi.org/10.1186/1471-2105-11-121","title":"Mayday - integrative analytics for expression data","display_name":"Mayday - integrative analytics for expression data","publication_year":2010,"publication_date":"2010-03-09","ids":{"openalex":"https://openalex.org/W2163132655","doi":"https://doi.org/10.1186/1471-2105-11-121","mag":"2163132655","pmid":"https://pubmed.ncbi.nlm.nih.gov/20214778"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-121","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-121","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-121","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-121","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040534345","display_name":"Florian Battke","orcid":"https://orcid.org/0000-0001-6021-5837"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Florian Battke","raw_affiliation_strings":["Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076 T\u00fcbingen, Germany","Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076 T\u00fcbingen, Germany","institution_ids":[]},{"raw_affiliation_string":"Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065252410","display_name":"Stephan Symons","orcid":null},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stephan Symons","raw_affiliation_strings":["Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061586847","display_name":"Kay Nieselt","orcid":"https://orcid.org/0000-0002-1283-7065"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Kay Nieselt","raw_affiliation_strings":["Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics T\u00fcbingen, University of T\u00fcbingen, Sand 14, 72076, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5040534345"],"corresponding_institution_ids":["https://openalex.org/I8087733"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":7.029,"has_fulltext":true,"cited_by_count":109,"citation_normalized_percentile":{"value":0.97866869,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"11","issue":"1","first_page":"121","last_page":"121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7888201475143433},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.6582379341125488},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6562339067459106},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.606985867023468},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.5518645644187927},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5233087539672852},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.4661235809326172},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44977518916130066},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.4429551064968109},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.43597984313964844},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.43247273564338684},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.42295682430267334},{"id":"https://openalex.org/keywords/plot","display_name":"Plot (graphics)","score":0.41559818387031555},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.41198182106018066},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.21815329790115356},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2119811773300171},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1229570209980011}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7888201475143433},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.6582379341125488},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6562339067459106},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.606985867023468},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.5518645644187927},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5233087539672852},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.4661235809326172},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44977518916130066},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.4429551064968109},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.43597984313964844},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.43247273564338684},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.42295682430267334},{"id":"https://openalex.org/C167651023","wikidata":"https://www.wikidata.org/wiki/Q1474611","display_name":"Plot (graphics)","level":2,"score":0.41559818387031555},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.41198182106018066},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.21815329790115356},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2119811773300171},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1229570209980011},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-121","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-121","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-121","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20214778","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20214778","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:1423aaec296a493b938b2918fd1de033","is_oa":true,"landing_page_url":"https://doaj.org/article/1423aaec296a493b938b2918fd1de033","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 121 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2848234","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2848234","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-121","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-121","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-121","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2163132655.pdf","grobid_xml":"https://content.openalex.org/works/W2163132655.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W1516095885","https://openalex.org/W1570448133","https://openalex.org/W1673310716","https://openalex.org/W1679913846","https://openalex.org/W1976208596","https://openalex.org/W1980160222","https://openalex.org/W1981509058","https://openalex.org/W2002084527","https://openalex.org/W2012960603","https://openalex.org/W2017840637","https://openalex.org/W2021129827","https://openalex.org/W2035421116","https://openalex.org/W2041877620","https://openalex.org/W2051123219","https://openalex.org/W2054880642","https://openalex.org/W2097865522","https://openalex.org/W2103017472","https://openalex.org/W2116343015","https://openalex.org/W2116634113","https://openalex.org/W2120865735","https://openalex.org/W2123060905","https://openalex.org/W2128601422","https://openalex.org/W2129816388","https://openalex.org/W2131198961","https://openalex.org/W2150593711","https://openalex.org/W2154097321","https://openalex.org/W2154267801","https://openalex.org/W2157795344","https://openalex.org/W2160697532","https://openalex.org/W2167568509","https://openalex.org/W2582743722","https://openalex.org/W4230392683","https://openalex.org/W4237222446","https://openalex.org/W4242743062","https://openalex.org/W4294107304"],"related_works":["https://openalex.org/W4287378204","https://openalex.org/W2981957539","https://openalex.org/W47352601","https://openalex.org/W2545422590","https://openalex.org/W4240705470","https://openalex.org/W2945311252","https://openalex.org/W2392768766","https://openalex.org/W2058118494","https://openalex.org/W2095118173","https://openalex.org/W2382021449"],"abstract_inverted_index":{"We":[0],"present":[1],"a":[2,7],"major":[3],"extension":[4,39],"of":[5,32,52],"Mayday,":[6],"very":[8,56],"versatile":[9],"open-source":[10],"framework":[11],"for":[12,19,48],"efficient":[13],"micro":[14],"array":[15],"data":[16,58],"analysis":[17],"designed":[18],"biologists":[20],"and":[21,44],"bioinformaticians.":[22],"Most":[23],"everyday":[24],"tasks":[25],"are":[26],"already":[27],"covered.":[28],"The":[29],"large":[30],"number":[31],"available":[33,62],"plugins":[34,43],"as":[35,37],"well":[36],"the":[38,49],"possibilities":[40],"using":[41],"compiled":[42],"ad-hoc":[45],"scripting":[46],"allow":[47],"rapid":[50],"adaption":[51],"Mayday":[53,60],"also":[54],"to":[55],"specialized":[57],"exploration.":[59],"is":[61],"at":[63],"http://microarray-analysis.org.":[64]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":15},{"year":2014,"cited_by_count":13},{"year":2013,"cited_by_count":18},{"year":2012,"cited_by_count":16}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}