{"id":"https://openalex.org/W2078478843","doi":"https://doi.org/10.1186/1471-2105-10-s5-s1","title":"Issues in learning an ontology from text","display_name":"Issues in learning an ontology from text","publication_year":2009,"publication_date":"2009-05-01","ids":{"openalex":"https://openalex.org/W2078478843","doi":"https://doi.org/10.1186/1471-2105-10-s5-s1","mag":"2078478843","pmid":"https://pubmed.ncbi.nlm.nih.gov/19426458"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-s5-s1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-s5-s1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-S5-S1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-S5-S1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079176157","display_name":"Christopher Brewster","orcid":"https://orcid.org/0000-0001-6594-9178"},"institutions":[{"id":"https://openalex.org/I169199633","display_name":"Aston University","ror":"https://ror.org/05j0ve876","country_code":"GB","type":"education","lineage":["https://openalex.org/I169199633"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Christopher Brewster","raw_affiliation_strings":["Aston Business School, Aston University, Aston Triangle, Birmingham, B4 7ET, UK. C.A.Brewster@aston.ac.uk","Aston Business School Aston University Aston Triangle Birmingham UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aston Business School, Aston University, Aston Triangle, Birmingham, B4 7ET, UK. C.A.Brewster@aston.ac.uk","institution_ids":["https://openalex.org/I169199633"]},{"raw_affiliation_string":"Aston Business School Aston University Aston Triangle Birmingham UK","institution_ids":["https://openalex.org/I169199633"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024899492","display_name":"Simon Jupp","orcid":"https://orcid.org/0000-0002-0643-3144"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Simon Jupp","raw_affiliation_strings":["School of Computer Science, Manchester University, Manchester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Manchester University, Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109267718","display_name":"Joanne Luciano","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Joanne Luciano","raw_affiliation_strings":["Harvard Medical School, Boston, USA","Harvard Medical School Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School, Boston, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Harvard Medical School Boston, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026721568","display_name":"David M. Shotton","orcid":"https://orcid.org/0000-0001-5506-523X"},"institutions":[{"id":"https://openalex.org/I2802123492","display_name":"Oxford Research Group","ror":"https://ror.org/00z4w4f29","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802123492"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"David Shotton","raw_affiliation_strings":["Department of Zoology, Image Bioinformatics Research Group, Oxford, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Zoology, Image Bioinformatics Research Group, Oxford, UK","institution_ids":["https://openalex.org/I2802123492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049799218","display_name":"Robert Stevens","orcid":"https://orcid.org/0000-0002-6038-9025"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Robert D Stevens","raw_affiliation_strings":["School of Computer Science, Manchester University, Manchester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Manchester University, Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100404392","display_name":"Ziqi Zhang","orcid":"https://orcid.org/0000-0002-8587-8618"},"institutions":[{"id":"https://openalex.org/I91136226","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044","country_code":"GB","type":"education","lineage":["https://openalex.org/I91136226"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Ziqi Zhang","raw_affiliation_strings":["Department of Computer Science, University of Sheffield, Sheffield, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Sheffield, Sheffield, UK","institution_ids":["https://openalex.org/I91136226"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5024899492","https://openalex.org/A5026721568","https://openalex.org/A5049799218","https://openalex.org/A5079176157","https://openalex.org/A5100404392","https://openalex.org/A5109267718"],"corresponding_institution_ids":["https://openalex.org/I111088046","https://openalex.org/I136199984","https://openalex.org/I169199633","https://openalex.org/I2802123492","https://openalex.org/I28407311","https://openalex.org/I91136226"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.3694,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.80213766,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"10","issue":"S5","first_page":"S1","last_page":"S1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9625999927520752,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9625999927520752,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.026900000870227814,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.0013000000035390258,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6020739078521729},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5721838474273682},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.46765321493148804},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.45785319805145264},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4341820180416107},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.4106835722923279},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3864007294178009},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3697110116481781},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.32947999238967896},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23266103863716125},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.12267175316810608},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11222091317176819},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.08250898122787476}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6020739078521729},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5721838474273682},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.46765321493148804},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.45785319805145264},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4341820180416107},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.4106835722923279},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3864007294178009},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3697110116481781},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.32947999238967896},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23266103863716125},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.12267175316810608},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11222091317176819},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.08250898122787476},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1186/1471-2105-10-s5-s1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-s5-s1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-S5-S1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19426458","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19426458","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pure.atira.dk:publications/8a65980a-5abf-4147-8500-de12976d2011","is_oa":false,"landing_page_url":"https://research.manchester.ac.uk/en/publications/8a65980a-5abf-4147-8500-de12976d2011","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Brewster, C, Jupp, S, Luciano, J, Shotton, D, Stevens, R D & Zhang, Z 2009, 'Issues in learning an ontology from text', BMC Bioinformatics, vol. 10, no. 5, S1. https://doi.org/10.1186/1471-2105-10-S5-S1","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:publications.aston.ac.uk:22357","is_oa":false,"landing_page_url":"https://publications.aston.ac.uk/view/author/d3fb73b2661d9e2c4c379c3b02c6cca4.html>,","pdf_url":null,"source":{"id":"https://openalex.org/S4306400483","display_name":"Aston Publications Explorer (Aston University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169199633","host_organization_name":"Aston University","host_organization_lineage":["https://openalex.org/I169199633"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"NonPeerReviewed"},{"id":"pmh:oai:eprints.whiterose.ac.uk:9620","is_oa":true,"landing_page_url":"http://eprints.whiterose.ac.uk/9620/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:1852048","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC2679401","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:irep.ntu.ac.uk:28482","is_oa":false,"landing_page_url":"http://irep.ntu.ac.uk/id/eprint/28482/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400559","display_name":"Nottingham Trent University's Institutional Repository (Nottingham Trent Repository)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I52590639","host_organization_name":"Nottingham Trent University","host_organization_lineage":["https://openalex.org/I52590639"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2679401","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2679401","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-s5-s1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-s5-s1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-S5-S1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7099999785423279,"display_name":"Decent work and economic growth","id":"https://metadata.un.org/sdg/8"}],"awards":[{"id":"https://openalex.org/G193094427","display_name":null,"funder_award_id":"EP/E021352/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G5714431875","display_name":"THE ONTOGENESIS NETWORK - A network of excellence to foster the creation, ontogeny and evolution of biological, bioinformatics and medical ontologies","funder_award_id":"EP/E021352/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G6039427118","display_name":null,"funder_award_id":"EP/E027075/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334609","display_name":"Arts and Humanities Research Council","ror":"https://ror.org/0505m1554"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2078478843.pdf","grobid_xml":"https://content.openalex.org/works/W2078478843.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W43572258","https://openalex.org/W90870867","https://openalex.org/W157311081","https://openalex.org/W656960796","https://openalex.org/W1525521077","https://openalex.org/W1529346362","https://openalex.org/W1546842539","https://openalex.org/W1556107849","https://openalex.org/W1570601904","https://openalex.org/W1578697867","https://openalex.org/W1598223721","https://openalex.org/W1965148536","https://openalex.org/W1968332217","https://openalex.org/W1990890881","https://openalex.org/W2018874418","https://openalex.org/W2039612385","https://openalex.org/W2044070623","https://openalex.org/W2052116093","https://openalex.org/W2066066594","https://openalex.org/W2068737686","https://openalex.org/W2099724779","https://openalex.org/W2102143885","https://openalex.org/W2103017472","https://openalex.org/W2105922907","https://openalex.org/W2107434887","https://openalex.org/W2110025254","https://openalex.org/W2112652344","https://openalex.org/W2113142309","https://openalex.org/W2153369195","https://openalex.org/W2160690027","https://openalex.org/W2234028104","https://openalex.org/W2623273758","https://openalex.org/W3135132088","https://openalex.org/W4245799227","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2003333417","https://openalex.org/W2378862226","https://openalex.org/W118236634","https://openalex.org/W2355326633","https://openalex.org/W2804669904","https://openalex.org/W2149777447","https://openalex.org/W2347456287","https://openalex.org/W2121651557","https://openalex.org/W2782969047","https://openalex.org/W1983454176"],"abstract_inverted_index":{"BACKGROUND:":[0],"Ontology":[1],"construction":[2,42,229],"for":[3,45,189,220,230,254,299],"any":[4],"domain":[5,260],"is":[6,251,290],"a":[7,28,61,68,75,95,105,123,127,153,217,241,258,263,276],"labour":[8],"intensive":[9],"and":[10,20,63,82,99,203,238,247,261],"complex":[11],"process.":[12],"Any":[13],"methodology":[14],"that":[15,116,172,233,283],"can":[16,239],"reduce":[17],"the":[18,24,32,46,85,91,113,119,166,174,180,184,193,200,221,255,285,288,296],"cost":[19],"increase":[21],"efficiency":[22],"has":[23],"potential":[25],"to":[26,53,89,93,100,138,161,187,196,199,244,279,292],"make":[27,240],"major":[29],"impact":[30],"in":[31,40,60,104,301],"life":[33],"sciences.":[34],"This":[35],"paper":[36],"describes":[37],"an":[38,140],"experiment":[39],"ontology":[41,120,168,225,245,289,302],"from":[43,165,275],"text":[44,79],"animal":[47,149],"behaviour":[48,150],"domain.":[49],"Our":[50],"objective":[51],"was":[52],"see":[54],"how":[55],"much":[56],"could":[57],"be":[58,293],"done":[59],"simple":[62],"relatively":[64],"rapid":[65],"manner":[66],"using":[67,169],"corpus":[69,278],"of":[70,77,97,107,112,117,126,148,155,176,224,257,272,287,295],"journal":[71],"papers.":[72],"We":[73,109,158,182,215],"used":[74,183],"sequence":[76],"pre-existing":[78],"processing":[80],"steps,":[81],"here":[83],"describe":[84,110],"different":[86],"choices":[87],"made":[88],"clean":[90,162],"input,":[92],"derive":[94],"set":[96],"terms":[98,103,164,195,274],"structure":[101,144,198,205],"those":[102,282],"number":[106],"hierarchies.":[108],"some":[111],"challenges,":[114],"especially":[115],"focusing":[118],"appropriately":[121],"given":[122],"starting":[124],"point":[125],"heterogeneous":[128,277],"corpus.":[129],"RESULTS:":[130],"Using":[131],"mainly":[132],"automated":[133],"techniques,":[134],"we":[135,206],"were":[136,159],"able":[137,160],"construct":[139],"18055":[141],"term":[142,177],"ontology-like":[143],"with":[145],"73%":[146],"recall":[147],"terms,":[151],"but":[152],"precision":[154],"only":[156],"26%.":[157],"unwanted":[163],"nascent":[167],"lexico-syntactic":[170],"patterns":[171],"tested":[173],"validity":[175],"inclusion":[178],"within":[179],"ontology.":[181],"same":[185],"technique":[186],"test":[188],"subsumption":[190],"relationships":[191],"between":[192],"remaining":[194],"add":[197],"initially":[201],"broad":[202],"shallow":[204],"generated.":[207],"All":[208],"outputs":[209],"are":[210,284],"available":[211],"at":[212],"http://thirlmere.aston.ac.uk/~kiffer/animalbehaviour/.":[213],"CONCLUSION:":[214],"present":[216],"systematic":[218],"method":[219,250],"initial":[222],"steps":[223],"or":[226],"structured":[227],"vocabulary":[228],"scientific":[231,259],"domains":[232],"requires":[234],"limited":[235],"human":[236],"effort":[237],"contribution":[242],"both":[243,253],"learning":[246],"maintenance.":[248],"The":[249,270],"useful":[252],"exploration":[256],"as":[262],"stepping":[264],"stone":[265],"towards":[266],"formally":[267],"rigourous":[268],"ontologies.":[269],"filtering":[271],"recognised":[273],"focus":[280],"upon":[281],"topic":[286],"identified":[291],"one":[294],"main":[297],"challenges":[298],"research":[300],"learning.":[303]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":5}],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2025-10-10T00:00:00"}
