{"id":"https://openalex.org/W2099656145","doi":"https://doi.org/10.1186/1471-2105-10-73","title":"Disease candidate gene identification and prioritization using protein interaction networks","display_name":"Disease candidate gene identification and prioritization using protein interaction networks","publication_year":2009,"publication_date":"2009-02-27","ids":{"openalex":"https://openalex.org/W2099656145","doi":"https://doi.org/10.1186/1471-2105-10-73","mag":"2099656145","pmid":"https://pubmed.ncbi.nlm.nih.gov/19245720"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-73","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-73","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-73","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-73","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100714128","display_name":"Jing Chen","orcid":"https://orcid.org/0000-0002-6227-7393"},"institutions":[{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]},{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jing Chen","raw_affiliation_strings":["Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA. Jing.Chen@cchmc.org","Department of Biomedical Engineering, University of Cincinnati, Cincinnati, USA","Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA. Jing.Chen@cchmc.org","institution_ids":["https://openalex.org/I1285204247"]},{"raw_affiliation_string":"Department of Biomedical Engineering, University of Cincinnati, Cincinnati, USA","institution_ids":["https://openalex.org/I63135867"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, USA","institution_ids":["https://openalex.org/I1285204247"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064856328","display_name":"Bruce J. Aronow","orcid":"https://orcid.org/0000-0001-5109-6514"},"institutions":[{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]},{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]},{"id":"https://openalex.org/I92156820","display_name":"University of Cincinnati Medical Center","ror":"https://ror.org/02p72h367","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I92156820"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bruce J Aronow","raw_affiliation_strings":["Department of Biomedical Engineering, University of Cincinnati, Cincinnati, OH, USA","Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA","Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, USA","Department of Biomedical Engineering, University of Cincinnati, Cincinnati, USA","Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, University of Cincinnati, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I63135867"]},{"raw_affiliation_string":"Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I92156820"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I1285204247"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, USA","institution_ids":["https://openalex.org/I1285204247"]},{"raw_affiliation_string":"Department of Biomedical Engineering, University of Cincinnati, Cincinnati, USA","institution_ids":["https://openalex.org/I63135867"]},{"raw_affiliation_string":"Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, USA","institution_ids":["https://openalex.org/I92156820"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061689835","display_name":"Anil G. Jegga","orcid":"https://orcid.org/0000-0002-4881-7752"},"institutions":[{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]},{"id":"https://openalex.org/I92156820","display_name":"University of Cincinnati Medical Center","ror":"https://ror.org/02p72h367","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I92156820"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anil G Jegga","raw_affiliation_strings":["Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA","Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, USA","Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I92156820"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I1285204247"]},{"raw_affiliation_string":"Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, USA","institution_ids":["https://openalex.org/I92156820"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, USA","institution_ids":["https://openalex.org/I1285204247"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":13.8308,"has_fulltext":true,"cited_by_count":372,"citation_normalized_percentile":{"value":0.9933198,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"10","issue":"1","first_page":"73","last_page":"73"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.002099999925121665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/prioritization","display_name":"Prioritization","score":0.7856475114822388},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7240415811538696},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6752060055732727},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5906856060028076},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5673989653587341},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4509640336036682},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43623054027557373},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.390936017036438},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.37420564889907837},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.346434623003006},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1930062174797058},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.187514990568161},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08683225512504578}],"concepts":[{"id":"https://openalex.org/C2777615720","wikidata":"https://www.wikidata.org/wiki/Q11888847","display_name":"Prioritization","level":2,"score":0.7856475114822388},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7240415811538696},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6752060055732727},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5906856060028076},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5673989653587341},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4509640336036682},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43623054027557373},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.390936017036438},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.37420564889907837},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.346434623003006},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1930062174797058},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.187514990568161},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08683225512504578},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-10-73","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-73","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-73","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19245720","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19245720","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:98a500be43584e9a92204162466b8cf3","is_oa":true,"landing_page_url":"https://doaj.org/article/98a500be43584e9a92204162466b8cf3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 10, Iss 1, p 73 (2009)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2657789","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2657789","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-73","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-73","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-73","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5659890370","display_name":null,"funder_award_id":"P30 DK078392","funder_id":"https://openalex.org/F4320310256","funder_display_name":"University of Cincinnati"}],"funders":[{"id":"https://openalex.org/F4320310256","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2099656145.pdf","grobid_xml":"https://content.openalex.org/works/W2099656145.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1525985997","https://openalex.org/W1590222977","https://openalex.org/W1605637875","https://openalex.org/W1854214752","https://openalex.org/W1967570846","https://openalex.org/W1971937094","https://openalex.org/W1978558026","https://openalex.org/W1983202741","https://openalex.org/W1983530651","https://openalex.org/W1984249061","https://openalex.org/W1994803330","https://openalex.org/W2008620264","https://openalex.org/W2014022465","https://openalex.org/W2020301095","https://openalex.org/W2034759240","https://openalex.org/W2035595951","https://openalex.org/W2036299862","https://openalex.org/W2048296798","https://openalex.org/W2050674912","https://openalex.org/W2052033556","https://openalex.org/W2056944867","https://openalex.org/W2061716729","https://openalex.org/W2075155461","https://openalex.org/W2081306806","https://openalex.org/W2086753644","https://openalex.org/W2097498614","https://openalex.org/W2100251770","https://openalex.org/W2101181377","https://openalex.org/W2102427034","https://openalex.org/W2103717646","https://openalex.org/W2104399220","https://openalex.org/W2106193559","https://openalex.org/W2108181223","https://openalex.org/W2109555487","https://openalex.org/W2119220491","https://openalex.org/W2119412782","https://openalex.org/W2123280311","https://openalex.org/W2128245545","https://openalex.org/W2128428892","https://openalex.org/W2128923603","https://openalex.org/W2130638985","https://openalex.org/W2131323902","https://openalex.org/W2132056568","https://openalex.org/W2135021437","https://openalex.org/W2136479434","https://openalex.org/W2137518425","https://openalex.org/W2138621811","https://openalex.org/W2144656637","https://openalex.org/W2149310258","https://openalex.org/W2153280946","https://openalex.org/W2155699197","https://openalex.org/W2156070536","https://openalex.org/W2159675211","https://openalex.org/W2171403830","https://openalex.org/W2917431650","https://openalex.org/W4255855797"],"related_works":["https://openalex.org/W2506292322","https://openalex.org/W4283209547","https://openalex.org/W4367627632","https://openalex.org/W2184980933","https://openalex.org/W653452717","https://openalex.org/W2554445088","https://openalex.org/W2335661150","https://openalex.org/W1595456161","https://openalex.org/W2621003306","https://openalex.org/W4210478379"],"abstract_inverted_index":{"BACKGROUND:":[0],"Although":[1],"most":[2],"of":[3,19,56,81,97,122,134],"the":[4,17,20,29,51,57,63,95,98,112,120,153],"current":[5,30],"disease":[6,71,181,220],"candidate":[7,35,72,113,182,190,221],"gene":[8,21,36,183,191,198,222],"identification":[9],"and":[10,59,62,94,115,118,140,144,212],"prioritization":[11,37,192],"methods":[12,155,169,179,206],"depend":[13],"on":[14,43],"functional":[15,22,177],"annotations,":[16],"coverage":[18],"annotations":[23],"is":[24,40],"a":[25,34,75,79,90,102,131,157,162,186],"limiting":[26],"factor.":[27],"In":[28],"study,":[31],"we":[32,105,203],"describe":[33],"method":[38,66,151],"that":[39,205],"entirely":[41],"based":[42],"protein-protein":[44],"interaction":[45],"network":[46],"(PPIN)":[47],"analyses.":[48],"RESULTS:":[49],"For":[50],"first":[52],"time,":[53],"extended":[54],"versions":[55],"PageRank":[58,137],"HITS":[60,141],"algorithms,":[61],"K-Step":[64,149],"Markov":[65,150],"are":[67,170],"applied":[68],"to":[69,110],"prioritize":[70],"genes":[73,84,100,114],"in":[74,185],"training-test":[76],"schema.":[77],"Using":[78],"list":[80],"known":[82,99],"disease-related":[83],"from":[85],"our":[86,123],"earlier":[87],"study":[88],"as":[89,101,173,175],"training":[91],"set":[92],"(\"seeds\"),":[93],"rest":[96],"test":[103],"list,":[104],"perform":[106],"large-scale":[107],"cross":[108],"validation":[109],"rank":[111],"also":[116],"evaluate":[117],"compare":[119],"performance":[121],"approach.":[124],"Under":[125],"appropriate":[126],"settings":[127],"-":[128,152],"for":[129,136,148,180,208,219],"example,":[130],"back":[132],"probability":[133],"0.3":[135],"with":[138,142],"Priors":[139],"Priors,":[143],"step":[145],"size":[146],"6":[147],"three":[154],"achieved":[156],"comparable":[158],"AUC":[159],"value,":[160],"suggesting":[161],"similar":[163],"performance.":[164],"CONCLUSION:":[165],"Even":[166],"though":[167],"network-based":[168],"generally":[171],"not":[172],"effective":[174],"integrated":[176],"annotation-based":[178],"prioritization,":[184],"one-to-one":[187],"comparison,":[188],"PPIN-based":[189],"performs":[193],"better":[194],"than":[195],"all":[196],"other":[197],"features":[199],"or":[200],"annotations.":[201],"Additionally,":[202],"demonstrate":[204],"used":[207,218],"studying":[209],"both":[210],"social":[211],"Web":[213],"networks":[214],"can":[215],"be":[216],"successfully":[217],"prioritization.":[223]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":14},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":20},{"year":2022,"cited_by_count":12},{"year":2021,"cited_by_count":22},{"year":2020,"cited_by_count":29},{"year":2019,"cited_by_count":19},{"year":2018,"cited_by_count":16},{"year":2017,"cited_by_count":19},{"year":2016,"cited_by_count":22},{"year":2015,"cited_by_count":22},{"year":2014,"cited_by_count":37},{"year":2013,"cited_by_count":27},{"year":2012,"cited_by_count":33}],"updated_date":"2026-06-18T10:00:31.954636","created_date":"2025-10-10T00:00:00"}
