{"id":"https://openalex.org/W1986316513","doi":"https://doi.org/10.1186/1471-2105-10-7","title":"ContDist: a tool for the analysis of quantitative gene and promoter properties","display_name":"ContDist: a tool for the analysis of quantitative gene and promoter properties","publication_year":2009,"publication_date":"2009-01-07","ids":{"openalex":"https://openalex.org/W1986316513","doi":"https://doi.org/10.1186/1471-2105-10-7","mag":"1986316513","pmid":"https://pubmed.ncbi.nlm.nih.gov/19128472"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084745527","display_name":"Michael Hackenberg","orcid":"https://orcid.org/0000-0003-2248-3114"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Michael Hackenberg","raw_affiliation_strings":["Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Spain. mlhack@gmail.com","Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain","Functional Genomics Unit, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Spain. mlhack@gmail.com","institution_ids":["https://openalex.org/I4210112728"]},{"raw_affiliation_string":"Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain","institution_ids":["https://openalex.org/I4210112728","https://openalex.org/I4210115082"]},{"raw_affiliation_string":"Functional Genomics Unit, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain","institution_ids":["https://openalex.org/I4210112728","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024803439","display_name":"Gorka Lasso","orcid":"https://orcid.org/0000-0001-5355-323X"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Gorka Lasso","raw_affiliation_strings":["Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, 48160, Derio, Bizkaia, Spain","Structural Biology Unit, CIC bioGUNE, Technology Park of Bizkaia, 48160, Derio, Bizkaia, Spain","Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain","Structural Biology Unit, CIC bioGUNE, Technology Park of Bizkaia, Derio, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, 48160, Derio, Bizkaia, Spain","institution_ids":["https://openalex.org/I4210112728"]},{"raw_affiliation_string":"Structural Biology Unit, CIC bioGUNE, Technology Park of Bizkaia, 48160, Derio, Bizkaia, Spain","institution_ids":["https://openalex.org/I4210112728"]},{"raw_affiliation_string":"Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain","institution_ids":["https://openalex.org/I4210112728","https://openalex.org/I4210115082"]},{"raw_affiliation_string":"Structural Biology Unit, CIC bioGUNE, Technology Park of Bizkaia, Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059654999","display_name":"Rune Matthiesen","orcid":"https://orcid.org/0000-0002-6353-2616"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES","PT"],"is_corresponding":false,"raw_author_name":"Rune Matthiesen","raw_affiliation_strings":["Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, 48160, Derio, Bizkaia, Spain","IPATIMUP, Rua Dr. Roberto Frias s/n, 4200-465, PORTO, Portugal","Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain","IPATIMUP, Rua Dr. Roberto Frias s/n, PORTO, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, 48160, Derio, Bizkaia, Spain","institution_ids":["https://openalex.org/I4210112728"]},{"raw_affiliation_string":"IPATIMUP, Rua Dr. Roberto Frias s/n, 4200-465, PORTO, Portugal","institution_ids":["https://openalex.org/I182534213"]},{"raw_affiliation_string":"Bioinformatics Group, CIC bioGUNE, CIBER-HEPAD, Technology Park of Bizkaia, Derio, Spain","institution_ids":["https://openalex.org/I4210112728","https://openalex.org/I4210115082"]},{"raw_affiliation_string":"IPATIMUP, Rua Dr. Roberto Frias s/n, PORTO, Portugal","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5084745527"],"corresponding_institution_ids":["https://openalex.org/I4210112728","https://openalex.org/I4210115082"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":0.7558,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.68818843,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"10","issue":"1","first_page":"7","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4235999882221222,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4235999882221222,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.38019999861717224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.06019999831914902,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6251402497291565},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6235078573226929},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4949578642845154},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.48470258712768555},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4745151400566101},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.4533859193325043},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.24313965439796448}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6251402497291565},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6235078573226929},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4949578642845154},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.48470258712768555},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4745151400566101},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.4533859193325043},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.24313965439796448}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-10-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19128472","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19128472","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2631519","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2631519","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:bbbeae52344e44adabb19fd52b527552","is_oa":false,"landing_page_url":"https://doaj.org/article/bbbeae52344e44adabb19fd52b527552","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 10, Iss 1, p 7 (2009)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320315493","display_name":"Department of Industry, Tourism and Trade","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1986316513.pdf","grobid_xml":"https://content.openalex.org/works/W1986316513.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W1967841068","https://openalex.org/W1995945562","https://openalex.org/W1998902445","https://openalex.org/W2004146038","https://openalex.org/W2011549524","https://openalex.org/W2043586699","https://openalex.org/W2050249780","https://openalex.org/W2058549086","https://openalex.org/W2065436482","https://openalex.org/W2069511429","https://openalex.org/W2076446466","https://openalex.org/W2090969569","https://openalex.org/W2101553331","https://openalex.org/W2103017472","https://openalex.org/W2107903949","https://openalex.org/W2114970231","https://openalex.org/W2117476893","https://openalex.org/W2118930999","https://openalex.org/W2122683221","https://openalex.org/W2123174009","https://openalex.org/W2126804125","https://openalex.org/W2130410032","https://openalex.org/W2130790725","https://openalex.org/W2135230352","https://openalex.org/W2136707328","https://openalex.org/W2140628921","https://openalex.org/W2145191876","https://openalex.org/W2146135000","https://openalex.org/W2152274187","https://openalex.org/W2153007310","https://openalex.org/W2161399316","https://openalex.org/W2164683872","https://openalex.org/W2171220883","https://openalex.org/W2402793346","https://openalex.org/W3106889297"],"related_works":["https://openalex.org/W1969771092","https://openalex.org/W2795723184","https://openalex.org/W2025529750","https://openalex.org/W2891858816","https://openalex.org/W184057646","https://openalex.org/W2042874675","https://openalex.org/W129398428","https://openalex.org/W3212414177","https://openalex.org/W1975811142","https://openalex.org/W2034625591"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,116,196],"understanding":[2],"of":[3,24,43,55,65,67,75,98,123,166,204,252],"how":[4],"promoter":[5,63,100,114,126,157,164,233,257],"regions":[6,64,127,258],"regulate":[7],"gene":[8,81,112,124,155],"expression":[9],"is":[10,19,217,236,268],"complicated":[11],"and":[12,33,58,113,125,156,183,192,244,255],"far":[13,71],"from":[14,270],"being":[15],"fully":[16],"understood.":[17],"It":[18],"known":[20],"that":[21,89],"histones'":[22],"regulation":[23,42],"DNA":[25,27],"compactness,":[26],"methylation,":[28],"transcription":[29],"factor":[30],"binding":[31],"sites":[32],"CpG":[34],"islands":[35],"play":[36],"a":[37,44,95,106,218,228],"role":[38],"in":[39,61,148,173,263],"the":[40,53,62,72,79,87,99,146,149,159,163,177,184,187,202,232,253],"transcriptional":[41],"gene.":[45],"Many":[46],"high-throughput":[47],"techniques":[48],"exist":[49],"nowadays":[50],"which":[51,139,235,259],"permit":[52],"detection":[54],"epigenetic":[56],"marks":[57],"regulatory":[59],"elements":[60],"thousands":[66],"genes.":[68,195],"However,":[69],"so":[70],"subsequent":[73],"analysis":[74,97,138],"such":[76],"experiments":[77],"(e.g.":[78],"resulting":[80],"lists)":[82],"have":[83],"been":[84],"hampered":[85],"by":[86,239],"fact":[88],"currently":[90],"no":[91],"tool":[92,107,220],"exists":[93],"for":[94,128],"detailed":[96],"regions.":[101],"RESULTS:":[102],"We":[103],"present":[104],"ContDist,":[105],"to":[108,135],"statistically":[109],"analyze":[110],"quantitative":[111,121,154,248],"properties.":[115],"software":[117],"includes":[118],"approximately":[119],"200":[120],"features":[122,147,251],"7":[129],"commonly":[130],"studied":[131],"species.":[132],"In":[133],"contrast":[134],"\"traditionally\"":[136],"ontological":[137],"only":[140],"works":[141],"on":[142,162,179,186,231],"qualitative":[143],"data,":[144],"all":[145,241],"underlying":[150],"annotation":[151],"database":[152],"are":[153,260],"properties.Utilizing":[158],"strong":[160,229],"focus":[161,230],"region":[165,234],"this":[167],"tool,":[168],"we":[169],"show":[170],"its":[171,256],"usefulness":[172],"two":[174,197,222],"case":[175,198],"studies;":[176],"first":[178],"differentially":[180],"methylated":[181],"promoters":[182],"second":[185],"fundamental":[188],"differences":[189],"between":[190],"housekeeping":[191],"tissue":[193],"specific":[194],"studies":[199],"allow":[200],"both":[201],"confirmation":[203],"recent":[205],"findings":[206],"as":[207,209],"well":[208],"revealing":[210],"previously":[211],"unreported":[212],"biological":[213],"relations.":[214],"CONCLUSION:":[215],"ContDist":[216,267],"new":[219],"with":[221],"important":[223],"properties:":[224],"1)":[225],"it":[226,246],"has":[227],"usually":[237],"disregarded":[238],"virtually":[240],"ontology":[242],"tools":[243],"2)":[245],"uses":[247],"(continuously":[249],"distributed)":[250],"genes":[254],"not":[261],"available":[262,269],"any":[264],"other":[265],"tool.":[266],"http://web.bioinformatics.cicbiogune.es/CD/ContDistribution.php.":[271]},"counts_by_year":[{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
