{"id":"https://openalex.org/W2088884158","doi":"https://doi.org/10.1186/1471-2105-10-450","title":"A service-oriented architecture for integrating the modeling and formal verification of genetic regulatory networks","display_name":"A service-oriented architecture for integrating the modeling and formal verification of genetic regulatory networks","publication_year":2009,"publication_date":"2009-12-01","ids":{"openalex":"https://openalex.org/W2088884158","doi":"https://doi.org/10.1186/1471-2105-10-450","mag":"2088884158","pmid":"https://pubmed.ncbi.nlm.nih.gov/20042075"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-450","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-450","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-450","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-450","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025560387","display_name":"Pedro T. Monteiro","orcid":"https://orcid.org/0000-0002-7934-5495"},"institutions":[{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]}],"countries":["FR","PT"],"is_corresponding":true,"raw_author_name":"Pedro T Monteiro","raw_affiliation_strings":["INRIA Grenoble-Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334 St Ismier Cedex, France. Pedro.Monteiro@inria.fr","INRIA Grenoble - Rh\u00f4ne-Alpes, St Ismier Cedex, France","INESC-ID/IST, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"INRIA Grenoble-Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334 St Ismier Cedex, France. Pedro.Monteiro@inria.fr","institution_ids":["https://openalex.org/I4210101348"]},{"raw_affiliation_string":"INRIA Grenoble - Rh\u00f4ne-Alpes, St Ismier Cedex, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"INESC-ID/IST, Lisbon, Portugal","institution_ids":["https://openalex.org/I121345201"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021791925","display_name":"Estelle Dumas","orcid":null},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Estelle Dumas","raw_affiliation_strings":["INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#"],"affiliations":[{"raw_affiliation_string":"INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348"]},{"raw_affiliation_string":"INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#","institution_ids":["https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013910021","display_name":"Bruno Besson","orcid":null},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bruno Besson","raw_affiliation_strings":["INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#"],"affiliations":[{"raw_affiliation_string":"INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348"]},{"raw_affiliation_string":"INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#","institution_ids":["https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109230703","display_name":"Radu Mateescu","orcid":null},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Radu Mateescu","raw_affiliation_strings":["INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#"],"affiliations":[{"raw_affiliation_string":"INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348"]},{"raw_affiliation_string":"INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#","institution_ids":["https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091649231","display_name":"Michel Le Page","orcid":"https://orcid.org/0000-0002-0671-2418"},"institutions":[{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I118618916","display_name":"Universit\u00e9 Pierre Mend\u00e8s France","ror":"https://ror.org/02f7wz369","country_code":"FR","type":"education","lineage":["https://openalex.org/I118618916","https://openalex.org/I899635006"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Michel Page","raw_affiliation_strings":["INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","Institut d'Administration des Entreprises, Universit\u00e9 Pierre Mend\u00e8s France, Grenoble, France","INRIA Grenoble - Rh\u00f4ne-Alpes, St Ismier Cedex, France"],"affiliations":[{"raw_affiliation_string":"INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348"]},{"raw_affiliation_string":"Institut d'Administration des Entreprises, Universit\u00e9 Pierre Mend\u00e8s France, Grenoble, France","institution_ids":["https://openalex.org/I118618916"]},{"raw_affiliation_string":"INRIA Grenoble - Rh\u00f4ne-Alpes, St Ismier Cedex, France","institution_ids":["https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083766796","display_name":"Ana T. Freitas","orcid":"https://orcid.org/0000-0002-2997-5990"},"institutions":[{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Ana T Freitas","raw_affiliation_strings":["INESC-ID/IST, Rua Alves Redol 9, 1000-029, Lisbon, Portugal","INESC\u2010ID/IST Lisbon Portugal"],"affiliations":[{"raw_affiliation_string":"INESC-ID/IST, Rua Alves Redol 9, 1000-029, Lisbon, Portugal","institution_ids":["https://openalex.org/I121345201"]},{"raw_affiliation_string":"INESC\u2010ID/IST Lisbon Portugal","institution_ids":["https://openalex.org/I121345201"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054406248","display_name":"Hidde de Jong","orcid":"https://orcid.org/0000-0002-2226-650X"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Hidde de Jong","raw_affiliation_strings":["INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#"],"affiliations":[{"raw_affiliation_string":"INRIA Grenoble - Rh\u00f4ne-Alpes, 655 Avenue de l'Europe, Montbonnot, 38334, St Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348"]},{"raw_affiliation_string":"INRIA Grenoble Rh\u00f4ne-Alpes, St. Ismier Cedex, France#TAB#","institution_ids":["https://openalex.org/I1326498283"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5025560387"],"corresponding_institution_ids":["https://openalex.org/I121345201","https://openalex.org/I1326498283","https://openalex.org/I4210101348"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.6176,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.82861557,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"10","issue":"1","first_page":"450","last_page":"450"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11195","display_name":"Simulation Techniques and Applications","score":0.9812999963760376,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8270877599716187},{"id":"https://openalex.org/keywords/model-checking","display_name":"Model checking","score":0.7066609859466553},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.6436988115310669},{"id":"https://openalex.org/keywords/formal-verification","display_name":"Formal verification","score":0.6081200838088989},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.49383577704429626},{"id":"https://openalex.org/keywords/functional-verification","display_name":"Functional verification","score":0.4734109342098236},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.45311203598976135},{"id":"https://openalex.org/keywords/formal-specification","display_name":"Formal specification","score":0.4495578408241272},{"id":"https://openalex.org/keywords/runtime-verification","display_name":"Runtime verification","score":0.4399740993976593},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.42913591861724854},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.42813044786453247},{"id":"https://openalex.org/keywords/formal-methods","display_name":"Formal methods","score":0.42758485674858093},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.41673800349235535},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.41288357973098755},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.11172798275947571}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8270877599716187},{"id":"https://openalex.org/C110251889","wikidata":"https://www.wikidata.org/wiki/Q1569697","display_name":"Model checking","level":2,"score":0.7066609859466553},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.6436988115310669},{"id":"https://openalex.org/C111498074","wikidata":"https://www.wikidata.org/wiki/Q173326","display_name":"Formal verification","level":2,"score":0.6081200838088989},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.49383577704429626},{"id":"https://openalex.org/C62460635","wikidata":"https://www.wikidata.org/wiki/Q5508853","display_name":"Functional verification","level":3,"score":0.4734109342098236},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.45311203598976135},{"id":"https://openalex.org/C116253237","wikidata":"https://www.wikidata.org/wiki/Q1437424","display_name":"Formal specification","level":2,"score":0.4495578408241272},{"id":"https://openalex.org/C202973057","wikidata":"https://www.wikidata.org/wiki/Q7380130","display_name":"Runtime verification","level":3,"score":0.4399740993976593},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.42913591861724854},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.42813044786453247},{"id":"https://openalex.org/C75606506","wikidata":"https://www.wikidata.org/wiki/Q1049183","display_name":"Formal methods","level":2,"score":0.42758485674858093},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.41673800349235535},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.41288357973098755},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.11172798275947571},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-10-450","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-450","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-450","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20042075","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20042075","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-00784446v1","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-00784446","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 2009, 10 (1), pp.450. &#x27E8;10.1186/1471-2105-10-450&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:23a516b856b542bf883309460536e0ba","is_oa":true,"landing_page_url":"https://doaj.org/article/23a516b856b542bf883309460536e0ba","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 10, Iss 1, p 450 (2009)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2813247","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2813247","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-450","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-450","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-450","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6299983296","display_name":null,"funder_award_id":"PTDC/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G724804869","display_name":null,"funder_award_id":"SFRH/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2088884158.pdf","grobid_xml":"https://content.openalex.org/works/W2088884158.grobid-xml"},"referenced_works_count":51,"referenced_works":["https://openalex.org/W1489391022","https://openalex.org/W1491574517","https://openalex.org/W1502464218","https://openalex.org/W1506588809","https://openalex.org/W1506904277","https://openalex.org/W1507281497","https://openalex.org/W1512810258","https://openalex.org/W1565489190","https://openalex.org/W1566900355","https://openalex.org/W1594089636","https://openalex.org/W1859458367","https://openalex.org/W1968331537","https://openalex.org/W1975312467","https://openalex.org/W1975351609","https://openalex.org/W1996832037","https://openalex.org/W2003512951","https://openalex.org/W2005486846","https://openalex.org/W2014596857","https://openalex.org/W2025214663","https://openalex.org/W2028930711","https://openalex.org/W2031369606","https://openalex.org/W2034717053","https://openalex.org/W2037689113","https://openalex.org/W2047279254","https://openalex.org/W2049491928","https://openalex.org/W2053961182","https://openalex.org/W2058221907","https://openalex.org/W2066322491","https://openalex.org/W2092488734","https://openalex.org/W2092755129","https://openalex.org/W2093916942","https://openalex.org/W2096595244","https://openalex.org/W2100262444","https://openalex.org/W2102263388","https://openalex.org/W2112215450","https://openalex.org/W2116200832","https://openalex.org/W2117949454","https://openalex.org/W2119510512","https://openalex.org/W2121149194","https://openalex.org/W2122792487","https://openalex.org/W2129388048","https://openalex.org/W2131463591","https://openalex.org/W2137510998","https://openalex.org/W2150583791","https://openalex.org/W2150750144","https://openalex.org/W2160533336","https://openalex.org/W2161636210","https://openalex.org/W2405638142","https://openalex.org/W2913459036","https://openalex.org/W3084643966","https://openalex.org/W4401807813"],"related_works":["https://openalex.org/W3036403349","https://openalex.org/W2106507440","https://openalex.org/W2809618173","https://openalex.org/W2118572231","https://openalex.org/W2406499533","https://openalex.org/W2145025660","https://openalex.org/W2950360254","https://openalex.org/W3120172095","https://openalex.org/W2108860137","https://openalex.org/W1522369122"],"abstract_inverted_index":{"The":[0,30],"practical":[1],"use":[2],"of":[3,12,18,22,47,53,70],"the":[4,16,23,37,42,48],"proposed":[5],"web":[6],"service":[7],"is":[8],"illustrated":[9],"by":[10,51],"means":[11,52],"a":[13,19,54,61],"scenario":[14],"involving":[15],"analysis":[17],"qualitative":[20],"model":[21,38],"carbon":[24],"starvation":[25],"response":[26],"in":[27],"E.":[28],"coli.":[29],"service-oriented":[31],"architecture":[32],"allows":[33],"modelers":[34,69],"to":[35,64],"define":[36],"and":[39,44],"proceed":[40],"with":[41],"specification":[43],"formal":[45,65],"verification":[46,66],"biological":[49],"properties":[50],"unified":[55],"graphical":[56],"user":[57],"interface.":[58],"This":[59],"guarantees":[60],"transparent":[62],"access":[63],"technology":[67],"for":[68],"genetic":[71],"regulatory":[72],"networks.":[73]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
