{"id":"https://openalex.org/W2095455445","doi":"https://doi.org/10.1186/1471-2105-10-387","title":"Modeling lymphocyte homing and encounters in lymph nodes","display_name":"Modeling lymphocyte homing and encounters in lymph nodes","publication_year":2009,"publication_date":"2009-11-25","ids":{"openalex":"https://openalex.org/W2095455445","doi":"https://doi.org/10.1186/1471-2105-10-387","mag":"2095455445","pmid":"https://pubmed.ncbi.nlm.nih.gov/19939270"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-387","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-387","pdf_url":"https://link.springer.com/content/pdf/10.1186/1471-2105-10-387.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/1471-2105-10-387.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045230960","display_name":"Valentina Baldazzi","orcid":"https://orcid.org/0000-0001-9734-9759"},"institutions":[{"id":"https://openalex.org/I4210106125","display_name":"Istituto per le Applicazioni del Calcolo Mauro Picone","ror":"https://ror.org/00ygy3d85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210106125","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Valentina Baldazzi","raw_affiliation_strings":["Istituto per le Applicazioni del Calcolo M, Picone, Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V,le Manzoni 30, 00185 - Rome, Italy. valentina.baldazzi@inria.fr","IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)","IBIS - Modeling, simulation, measurement, and control of bacterial regulatory networks (655 avenue de l'Europe, Montbonnot, 38334 Saint Ismier CEDEX, France - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto per le Applicazioni del Calcolo M, Picone, Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V,le Manzoni 30, 00185 - Rome, Italy. valentina.baldazzi@inria.fr","institution_ids":["https://openalex.org/I4210106125"]},{"raw_affiliation_string":"IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)","institution_ids":["https://openalex.org/I4210106125"]},{"raw_affiliation_string":"IBIS - Modeling, simulation, measurement, and control of bacterial regulatory networks (655 avenue de l'Europe, Montbonnot, 38334 Saint Ismier CEDEX, France - France)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043250067","display_name":"Paola Paci","orcid":"https://orcid.org/0000-0002-9393-2047"},"institutions":[{"id":"https://openalex.org/I4210106125","display_name":"Istituto per le Applicazioni del Calcolo Mauro Picone","ror":"https://ror.org/00ygy3d85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210106125","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210162062","display_name":"Istituto di Analisi dei Sistemi ed Informatica Antonio Ruberti","ror":"https://ror.org/054ye0e45","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155236","https://openalex.org/I4210162062"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paola Paci","raw_affiliation_strings":["Istituto per le Applicazioni del Calcolo \"M. Picone\", Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V.le Manzoni 30, 00185, Rome, Italy","IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto per le Applicazioni del Calcolo \"M. Picone\", Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V.le Manzoni 30, 00185, Rome, Italy","institution_ids":["https://openalex.org/I4210106125","https://openalex.org/I4210162062"]},{"raw_affiliation_string":"IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)","institution_ids":["https://openalex.org/I4210106125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006496977","display_name":"Massimo Bernaschi","orcid":"https://orcid.org/0000-0003-3661-9836"},"institutions":[{"id":"https://openalex.org/I4210106125","display_name":"Istituto per le Applicazioni del Calcolo Mauro Picone","ror":"https://ror.org/00ygy3d85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210106125","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210162062","display_name":"Istituto di Analisi dei Sistemi ed Informatica Antonio Ruberti","ror":"https://ror.org/054ye0e45","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155236","https://openalex.org/I4210162062"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Massimo Bernaschi","raw_affiliation_strings":["Istituto per le Applicazioni del Calcolo \"M. Picone\", Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V.le Manzoni 30, 00185, Rome, Italy","IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto per le Applicazioni del Calcolo \"M. Picone\", Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V.le Manzoni 30, 00185, Rome, Italy","institution_ids":["https://openalex.org/I4210106125","https://openalex.org/I4210162062"]},{"raw_affiliation_string":"IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)","institution_ids":["https://openalex.org/I4210106125"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010454141","display_name":"Filippo Castiglione","orcid":"https://orcid.org/0000-0002-1442-3552"},"institutions":[{"id":"https://openalex.org/I4210106125","display_name":"Istituto per le Applicazioni del Calcolo Mauro Picone","ror":"https://ror.org/00ygy3d85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210106125","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210162062","display_name":"Istituto di Analisi dei Sistemi ed Informatica Antonio Ruberti","ror":"https://ror.org/054ye0e45","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155236","https://openalex.org/I4210162062"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Filippo Castiglione","raw_affiliation_strings":["Istituto per le Applicazioni del Calcolo \"M. Picone\", Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V.le Manzoni 30, 00185, Rome, Italy","IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto per le Applicazioni del Calcolo \"M. Picone\", Consiglio Nazionale delle Ricerche (CNR), c/o IASI-CNR, V.le Manzoni 30, 00185, Rome, Italy","institution_ids":["https://openalex.org/I4210106125","https://openalex.org/I4210162062"]},{"raw_affiliation_string":"IAC - Istituto per le Applicazioni del Calcolo 'Mauro Picone' (Viale de Policlinico 137, I-00161 Roma, Italy - Italy)","institution_ids":["https://openalex.org/I4210106125"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5045230960"],"corresponding_institution_ids":["https://openalex.org/I4210106125"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.7209,"has_fulltext":true,"cited_by_count":50,"citation_normalized_percentile":{"value":0.84657002,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"10","issue":"1","first_page":"387","last_page":"387"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10031","display_name":"T-cell and B-cell Immunology","score":0.42879998683929443,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10031","display_name":"T-cell and B-cell Immunology","score":0.42879998683929443,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.19280000030994415,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.11879999935626984,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/lymph-node","display_name":"Lymph node","score":0.7270757555961609},{"id":"https://openalex.org/keywords/lymph","display_name":"Lymph","score":0.7167222499847412},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.6822434663772583},{"id":"https://openalex.org/keywords/lymphatic-system","display_name":"Lymphatic system","score":0.6102048754692078},{"id":"https://openalex.org/keywords/homing","display_name":"Homing (biology)","score":0.6003130674362183},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.5607577562332153},{"id":"https://openalex.org/keywords/lymphocyte","display_name":"Lymphocyte","score":0.5157445073127747},{"id":"https://openalex.org/keywords/antigen-presentation","display_name":"Antigen presentation","score":0.5055265426635742},{"id":"https://openalex.org/keywords/lymphocyte-homing-receptor","display_name":"Lymphocyte homing receptor","score":0.46764442324638367},{"id":"https://openalex.org/keywords/antigen-presenting-cell","display_name":"Antigen-presenting cell","score":0.43022871017456055},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.42445462942123413},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.3805444538593292},{"id":"https://openalex.org/keywords/t-cell","display_name":"T cell","score":0.3457077741622925},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3304547369480133},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.2699233889579773},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.15314576029777527},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.07418841123580933}],"concepts":[{"id":"https://openalex.org/C2780849966","wikidata":"https://www.wikidata.org/wiki/Q170758","display_name":"Lymph node","level":2,"score":0.7270757555961609},{"id":"https://openalex.org/C2779720271","wikidata":"https://www.wikidata.org/wiki/Q179422","display_name":"Lymph","level":2,"score":0.7167222499847412},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.6822434663772583},{"id":"https://openalex.org/C181152851","wikidata":"https://www.wikidata.org/wiki/Q712604","display_name":"Lymphatic system","level":2,"score":0.6102048754692078},{"id":"https://openalex.org/C151872237","wikidata":"https://www.wikidata.org/wiki/Q1410759","display_name":"Homing (biology)","level":2,"score":0.6003130674362183},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.5607577562332153},{"id":"https://openalex.org/C2777761686","wikidata":"https://www.wikidata.org/wiki/Q715347","display_name":"Lymphocyte","level":2,"score":0.5157445073127747},{"id":"https://openalex.org/C83464605","wikidata":"https://www.wikidata.org/wiki/Q575296","display_name":"Antigen presentation","level":4,"score":0.5055265426635742},{"id":"https://openalex.org/C167454224","wikidata":"https://www.wikidata.org/wiki/Q2651746","display_name":"Lymphocyte homing receptor","level":4,"score":0.46764442324638367},{"id":"https://openalex.org/C67662055","wikidata":"https://www.wikidata.org/wiki/Q1047791","display_name":"Antigen-presenting cell","level":4,"score":0.43022871017456055},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.42445462942123413},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3805444538593292},{"id":"https://openalex.org/C2776090121","wikidata":"https://www.wikidata.org/wiki/Q193529","display_name":"T cell","level":3,"score":0.3457077741622925},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3304547369480133},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.2699233889579773},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.15314576029777527},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07418841123580933},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C85789140","wikidata":"https://www.wikidata.org/wiki/Q187640","display_name":"Cell adhesion","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001402","descriptor_name":"B-Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001402","descriptor_name":"B-Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001402","descriptor_name":"B-Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D002465","descriptor_name":"Cell Movement","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D002465","descriptor_name":"Cell Movement","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D002465","descriptor_name":"Cell Movement","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D003713","descriptor_name":"Dendritic Cells","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D003713","descriptor_name":"Dendritic Cells","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D003713","descriptor_name":"Dendritic Cells","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008198","descriptor_name":"Lymph Nodes","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008198","descriptor_name":"Lymph Nodes","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008198","descriptor_name":"Lymph Nodes","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008214","descriptor_name":"Lymphocytes","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008214","descriptor_name":"Lymphocytes","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008214","descriptor_name":"Lymphocytes","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-10-387","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-387","pdf_url":"https://link.springer.com/content/pdf/10.1186/1471-2105-10-387.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19939270","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19939270","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-00784447v1","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-00784447","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 2009, 10 (1), pp.387. &#x27E8;10.1186/1471-2105-10-387&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:5498f629672f4179b3e053212d0c1013","is_oa":false,"landing_page_url":"https://doaj.org/article/5498f629672f4179b3e053212d0c1013","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 10, Iss 1, p 387 (2009)","raw_type":"article"},{"id":"pmh:oai:iris.uniroma1.it:11573/1369873","is_oa":false,"landing_page_url":"http://hdl.handle.net/11573/1369873","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2790470","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2790470","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-387","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-387","pdf_url":"https://link.springer.com/content/pdf/10.1186/1471-2105-10-387.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2095455445.pdf","grobid_xml":"https://content.openalex.org/works/W2095455445.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W1521549152","https://openalex.org/W1586392520","https://openalex.org/W1964851502","https://openalex.org/W1970318694","https://openalex.org/W1976750616","https://openalex.org/W1988338839","https://openalex.org/W1992949591","https://openalex.org/W2001039642","https://openalex.org/W2006985918","https://openalex.org/W2014280917","https://openalex.org/W2015776459","https://openalex.org/W2016055373","https://openalex.org/W2016821270","https://openalex.org/W2021158172","https://openalex.org/W2056703680","https://openalex.org/W2062478481","https://openalex.org/W2065114044","https://openalex.org/W2074107830","https://openalex.org/W2086335524","https://openalex.org/W2086370911","https://openalex.org/W2091199034","https://openalex.org/W2094312280","https://openalex.org/W2106731348","https://openalex.org/W2109829361","https://openalex.org/W2130392812","https://openalex.org/W2132579946","https://openalex.org/W2136695636","https://openalex.org/W2141890333","https://openalex.org/W2148737502","https://openalex.org/W2149928606","https://openalex.org/W2157796499","https://openalex.org/W2162151514","https://openalex.org/W2170831273","https://openalex.org/W4250716583"],"related_works":["https://openalex.org/W1603468753","https://openalex.org/W3029450627","https://openalex.org/W2064267013","https://openalex.org/W2061140050","https://openalex.org/W71219971","https://openalex.org/W1661591147","https://openalex.org/W1504058752","https://openalex.org/W3029054740","https://openalex.org/W2021610127","https://openalex.org/W2415281218"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1],"efficiency":[2],"of":[3,16,25,37,50,68,75,93,104,110,123,126,137,143,157],"lymph":[4,26,52,70,147],"nodes":[5],"depends":[6],"on":[7,140],"tissue":[8],"structure":[9],"and":[10,33,60,72,79,108,134],"organization,":[11],"which":[12],"allow":[13],"the":[14,51,65,69,73,83,90,98,121,124,135,141,152,155,163,178],"coordination":[15],"lymphocyte":[17,144],"traffic.":[18],"Despite":[19],"their":[20],"essential":[21],"role,":[22],"our":[23],"understanding":[24],"node":[27,71],"specific":[28],"mechanisms":[29],"is":[30,165,173],"still":[31],"incomplete":[32],"currently":[34],"a":[35,46],"topic":[36],"intense":[38],"research.":[39],"RESULTS:":[40],"In":[41,149],"this":[42],"paper,":[43],"we":[44,119],"present":[45],"hybrid":[47],"discrete/continuous":[48],"model":[49,88,153],"node,":[53],"accounting":[54],"for":[55],"differences":[56],"in":[57,113,168],"cell":[58,171],"velocity":[59],"chemotactic":[61],"response,":[62,96,161],"influenced":[63],"by":[64],"spatial":[66],"compartmentalization":[67],"regulation":[74,142],"cells":[76,107,112,128],"migration,":[77],"encounter,":[78],"antigen":[80,116],"presentation":[81],"during":[82,132],"inflammation":[84],"process.":[85],"CONCLUSION:":[86],"Our":[87],"reproduces":[89],"correct":[91],"timing":[92],"an":[94,158],"immune":[95,160],"including":[97],"observed":[99],"time":[100,180],"delay":[101,177],"between":[102],"duplication":[103,109],"T":[105],"helper":[106],"B":[111],"response":[114,164,179],"to":[115,176,183],"exposure.":[117],"Furthermore,":[118],"investigate":[120],"consequences":[122],"absence":[125],"dendritic":[127],"at":[129],"different":[130],"times":[131],"infection,":[133],"dependence":[136],"system":[138],"dynamics":[139],"exit":[145],"from":[146],"nodes.":[148],"both":[150],"cases,":[151],"predicts":[154],"emergence":[156],"impaired":[159],"i.e.,":[162],"significantly":[166],"reduced":[167],"magnitude.":[169],"Dendritic":[170],"removal":[172],"also":[174],"shown":[175],"with":[181],"respect":[182],"normal":[184],"conditions.":[185]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":5}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
