{"id":"https://openalex.org/W2156790306","doi":"https://doi.org/10.1186/1471-2105-10-269","title":"Global haplotype partitioning for maximal associated SNP pairs","display_name":"Global haplotype partitioning for maximal associated SNP pairs","publication_year":2009,"publication_date":"2009-08-27","ids":{"openalex":"https://openalex.org/W2156790306","doi":"https://doi.org/10.1186/1471-2105-10-269","mag":"2156790306","pmid":"https://pubmed.ncbi.nlm.nih.gov/19712447"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-269","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-269","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-269","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-269","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087837194","display_name":"Ali Katanforoush","orcid":"https://orcid.org/0000-0001-5172-2167"},"institutions":[{"id":"https://openalex.org/I4210103004","display_name":"Institute of Biochemistry","ror":"https://ror.org/022dvs210","country_code":"HU","type":"facility","lineage":["https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I23946033","display_name":"University of Tehran","ror":"https://ror.org/05vf56z40","country_code":"IR","type":"education","lineage":["https://openalex.org/I23946033"]}],"countries":["HU","IR"],"is_corresponding":true,"raw_author_name":"Ali Katanforoush","raw_affiliation_strings":["Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran. katanfor@ibb.ut.ac.ir","Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran. katanfor@ibb.ut.ac.ir","institution_ids":["https://openalex.org/I4210103004"]},{"raw_affiliation_string":"Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran","institution_ids":["https://openalex.org/I23946033"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101481326","display_name":"Mehdi Sadeghi","orcid":"https://orcid.org/0000-0001-5900-8697"},"institutions":[{"id":"https://openalex.org/I4210146419","display_name":"Institute for Research in Fundamental Sciences","ror":"https://ror.org/04xreqs31","country_code":"IR","type":"facility","lineage":["https://openalex.org/I4210146419"]},{"id":"https://openalex.org/I3145578848","display_name":"Institute for Cognitive Science Studies","ror":"https://ror.org/0378cd528","country_code":"IR","type":"facility","lineage":["https://openalex.org/I3145578848"]},{"id":"https://openalex.org/I4210137727","display_name":"National Institute of Genetic Engineering and Biotechnology","ror":"https://ror.org/03ckh6215","country_code":"IR","type":"facility","lineage":["https://openalex.org/I4210137727"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Mehdi Sadeghi","raw_affiliation_strings":["National Institute of Genetics Engineering and Biotechnology, Tehran, Iran","School of Computer Science, Institute for Studies in Theoretical Physics and Mathematics, Tehran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Genetics Engineering and Biotechnology, Tehran, Iran","institution_ids":["https://openalex.org/I4210137727"]},{"raw_affiliation_string":"School of Computer Science, Institute for Studies in Theoretical Physics and Mathematics, Tehran, Iran","institution_ids":["https://openalex.org/I3145578848","https://openalex.org/I4210146419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030773673","display_name":"Hamid Pezeshk","orcid":"https://orcid.org/0000-0003-0399-1690"},"institutions":[{"id":"https://openalex.org/I23946033","display_name":"University of Tehran","ror":"https://ror.org/05vf56z40","country_code":"IR","type":"education","lineage":["https://openalex.org/I23946033"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Hamid Pezeshk","raw_affiliation_strings":["School of Mathematics, Statistics and Computer Science, and Center of Excellence in Biomathematics, College of Science, University of Tehran, Tehran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics, Statistics and Computer Science, and Center of Excellence in Biomathematics, College of Science, University of Tehran, Tehran, Iran","institution_ids":["https://openalex.org/I23946033"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006967737","display_name":"Elahe Elahi","orcid":"https://orcid.org/0000-0002-6897-2223"},"institutions":[{"id":"https://openalex.org/I23946033","display_name":"University of Tehran","ror":"https://ror.org/05vf56z40","country_code":"IR","type":"education","lineage":["https://openalex.org/I23946033"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Elahe Elahi","raw_affiliation_strings":["Department of Biology, College of Science, University of Tehran, Tehran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, College of Science, University of Tehran, Tehran, Iran","institution_ids":["https://openalex.org/I23946033"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5087837194"],"corresponding_institution_ids":["https://openalex.org/I23946033","https://openalex.org/I4210103004"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.3484,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.83533888,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"10","issue":"1","first_page":"269","last_page":"269"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.0007999999797903001,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/haplotype","display_name":"Haplotype","score":0.6390730738639832},{"id":"https://openalex.org/keywords/international-hapmap-project","display_name":"International HapMap Project","score":0.6383510231971741},{"id":"https://openalex.org/keywords/snp","display_name":"SNP","score":0.5445731282234192},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.5327085852622986},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.5319305658340454},{"id":"https://openalex.org/keywords/resampling","display_name":"Resampling","score":0.5271023511886597},{"id":"https://openalex.org/keywords/multiple-comparisons-problem","display_name":"Multiple comparisons problem","score":0.5115686058998108},{"id":"https://openalex.org/keywords/tag-snp","display_name":"Tag SNP","score":0.5079336762428284},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5014948844909668},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.47039732336997986},{"id":"https://openalex.org/keywords/genetic-association","display_name":"Genetic association","score":0.4172617495059967},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3921729326248169},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.35413527488708496},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33926793932914734},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.33222347497940063},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.32689857482910156},{"id":"https://openalex.org/keywords/allele","display_name":"Allele","score":0.25672224164009094},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11878129839897156},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.11788123846054077}],"concepts":[{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.6390730738639832},{"id":"https://openalex.org/C177580304","wikidata":"https://www.wikidata.org/wiki/Q1147298","display_name":"International HapMap Project","level":5,"score":0.6383510231971741},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.5445731282234192},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.5327085852622986},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.5319305658340454},{"id":"https://openalex.org/C150921843","wikidata":"https://www.wikidata.org/wiki/Q1170431","display_name":"Resampling","level":2,"score":0.5271023511886597},{"id":"https://openalex.org/C183905921","wikidata":"https://www.wikidata.org/wiki/Q1038757","display_name":"Multiple comparisons problem","level":2,"score":0.5115686058998108},{"id":"https://openalex.org/C55060382","wikidata":"https://www.wikidata.org/wiki/Q7675093","display_name":"Tag SNP","level":5,"score":0.5079336762428284},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5014948844909668},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47039732336997986},{"id":"https://openalex.org/C186413461","wikidata":"https://www.wikidata.org/wiki/Q744727","display_name":"Genetic association","level":5,"score":0.4172617495059967},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3921729326248169},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.35413527488708496},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33926793932914734},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.33222347497940063},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.32689857482910156},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.25672224164009094},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11878129839897156},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.11788123846054077}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-10-269","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-269","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-269","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19712447","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19712447","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:c4ff2a87238243bfae28dc4dee011698","is_oa":false,"landing_page_url":"https://doaj.org/article/c4ff2a87238243bfae28dc4dee011698","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 10, Iss 1, p 269 (2009)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2749056","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2749056","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-269","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-269","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-269","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322667","display_name":"University of Tehran","ror":"https://ror.org/05vf56z40"},{"id":"https://openalex.org/F4320322670","display_name":"Tehran University of Medical Sciences and Health Services","ror":"https://ror.org/01c4pz451"},{"id":"https://openalex.org/F4320327553","display_name":"International Max Planck Research School for Advanced Methods in Process and Systems Engineering","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2156790306.pdf","grobid_xml":"https://content.openalex.org/works/W2156790306.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1490038901","https://openalex.org/W1508985588","https://openalex.org/W1585006589","https://openalex.org/W1600084468","https://openalex.org/W1697411021","https://openalex.org/W1971943467","https://openalex.org/W1973769499","https://openalex.org/W1977522965","https://openalex.org/W1979748567","https://openalex.org/W1979963342","https://openalex.org/W1987882116","https://openalex.org/W2004897641","https://openalex.org/W2015408724","https://openalex.org/W2036502469","https://openalex.org/W2037454239","https://openalex.org/W2042413629","https://openalex.org/W2042636498","https://openalex.org/W2060547665","https://openalex.org/W2068155148","https://openalex.org/W2097896797","https://openalex.org/W2114191055","https://openalex.org/W2119279196","https://openalex.org/W2121692762","https://openalex.org/W2129928899","https://openalex.org/W2130539871","https://openalex.org/W2134599124","https://openalex.org/W2135732313","https://openalex.org/W2143645153","https://openalex.org/W2145371252","https://openalex.org/W2145756422","https://openalex.org/W2148527326","https://openalex.org/W2152664025","https://openalex.org/W2156087909","https://openalex.org/W2157288342","https://openalex.org/W2157669324","https://openalex.org/W2159372288","https://openalex.org/W2162224007","https://openalex.org/W2162530578","https://openalex.org/W2164785275","https://openalex.org/W2165915317","https://openalex.org/W2165937662","https://openalex.org/W2184017847","https://openalex.org/W2247766769","https://openalex.org/W2637207874","https://openalex.org/W2799805796","https://openalex.org/W4231922091","https://openalex.org/W4252501908","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2013739566","https://openalex.org/W2387863712","https://openalex.org/W1978000554","https://openalex.org/W1996768741","https://openalex.org/W2017507057","https://openalex.org/W2152596080","https://openalex.org/W2064792645","https://openalex.org/W2068155148","https://openalex.org/W2136862647","https://openalex.org/W2182405237"],"abstract_inverted_index":{"BACKGROUND:":[0],"Global":[1],"partitioning":[2,78,156],"based":[3,26,180],"on":[4,27,63,181,202],"pairwise":[5,243],"associations":[6,219],"of":[7,43,68,82,98,118,135,144,195,204,220,246,252],"SNPs":[8,247],"has":[9],"not":[10],"previously":[11,165],"been":[12],"used":[13],"to":[14,38,91,193],"define":[15,22],"haplotype":[16,124,196],"blocks":[17,73,117,128],"within":[18,71,126,216],"genomes.":[19],"Here,":[20],"we":[21,199],"an":[23],"association":[24,171,236,245],"index":[25],"LD":[28,45],"between":[29],"SNP":[30,51,84,221],"pairs.":[31,85],"We":[32,60],"use":[33],"the":[34,40,44,64,77,96,123,127,154,214,242],"Fisher's":[35],"exact":[36],"test":[37],"assess":[39],"statistical":[41,190],"significance":[42],"estimator.":[46],"By":[47],"this":[48,87],"test,":[49],"each":[50],"pair":[52],"is":[53,89,100,129,150],"characterized":[54],"as":[55],"associated,":[56],"independent,":[57],"or":[58],"not-statistically-significant.":[59],"set":[61],"limits":[62],"maximum":[65],"acceptable":[66],"proportion":[67,81],"independent":[69],"pairs":[70,222],"all":[72],"and":[74],"search":[75],"for":[76,157,231],"with":[79,111],"maximal":[80],"associated":[83],"Essentially,":[86],"model":[88,143],"reduced":[90],"a":[92,104,132,141,169,176,188,228],"constrained":[93],"optimization":[94],"problem,":[95],"solution":[97],"which":[99,217],"obtained":[101],"by":[102,131,187],"iterating":[103],"dynamic":[105],"programming":[106],"algorithm.":[107],"RESULTS:":[108],"In":[109],"comparison":[110],"other":[112],"methods,":[113],"our":[114,148],"algorithm":[115,149,161],"reports":[116],"larger":[119],"average":[120],"size.":[121],"Nevertheless,":[122],"diversity":[125],"captured":[130],"small":[133],"number":[134],"tagSNPs.":[136],"Resampling":[137],"HapMap":[138],"haplotypes":[139],"under":[140],"block-based":[142,189],"recombination":[145,205,257],"showed":[146],"that":[147,184,241],"robust":[151],"in":[152,168,234,255],"reproducing":[153],"same":[155],"recombinant":[158],"samples.":[159],"Our":[160,208,238],"performed":[162,200],"better":[163],"than":[164],"reported":[166],"models":[167],"case-control":[170],"study":[172],"aimed":[173],"at":[174],"mapping":[175],"single":[177],"locus":[178],"trait,":[179],"simulation":[182],"results":[183,239],"were":[185],"evaluated":[186],"test.":[191],"Compared":[192],"methods":[194],"block":[197],"partitioning,":[198],"best":[201],"detection":[203],"hotspots.":[206,258],"CONCLUSION:":[207],"proposed":[209],"method":[210],"divides":[211],"chromosomes":[212],"into":[213],"regions":[215],"allelic":[218,244],"are":[223],"maximized.":[224],"This":[225],"approach":[226],"presents":[227],"native":[229],"design":[230],"dimension":[232],"reduction":[233],"genome-wide":[235],"studies.":[237],"show":[240],"can":[248],"describe":[249],"various":[250],"features":[251],"genomic":[253],"variation,":[254],"particular":[256]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
