{"id":"https://openalex.org/W2128339470","doi":"https://doi.org/10.1186/1471-2105-10-265","title":"dictyExpress: a Dictyostelium discoideum gene expression database with an explorative data analysis web-based interface","display_name":"dictyExpress: a Dictyostelium discoideum gene expression database with an explorative data analysis web-based interface","publication_year":2009,"publication_date":"2009-08-25","ids":{"openalex":"https://openalex.org/W2128339470","doi":"https://doi.org/10.1186/1471-2105-10-265","mag":"2128339470","pmid":"https://pubmed.ncbi.nlm.nih.gov/19706156"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-265","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-265","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-265","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-265","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044846726","display_name":"Gregor Rot","orcid":"https://orcid.org/0009-0001-7888-6687"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Gregor Rot","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana, SI-1000 Ljubljana, Slovenia. gregor.rot@fri.uni-lj.si","Faculty of Computer and Information Science, University of Ljubljana, SI-1000 Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, SI-1000 Ljubljana, Slovenia. gregor.rot@fri.uni-lj.si","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, SI-1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049866282","display_name":"Anup Parikh","orcid":"https://orcid.org/0000-0003-3120-1721"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anup Parikh","raw_affiliation_strings":["Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","Graduate Program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, TX, 77030, USA","Graduate program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Graduate Program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Graduate program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070653907","display_name":"Toma\u017e Curk","orcid":"https://orcid.org/0000-0003-4888-7256"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Tomaz Curk","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana, SI-1000, Ljubljana, Slovenia","Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, SI-1000, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029971514","display_name":"Adam Kuspa","orcid":"https://orcid.org/0000-0002-9156-149X"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adam Kuspa","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA","Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055034051","display_name":"Gad Shaulsky","orcid":"https://orcid.org/0000-0002-0532-0551"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gad Shaulsky","raw_affiliation_strings":["Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","Graduate Program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, TX, 77030, USA","Graduate program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Graduate Program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Graduate program in Structural Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073792028","display_name":"Bla\u017e Zupan","orcid":"https://orcid.org/0000-0002-5864-7056"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["SI","US"],"is_corresponding":true,"raw_author_name":"Blaz Zupan","raw_affiliation_strings":["Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","Faculty of Computer and Information Science, University of Ljubljana, SI-1000, Ljubljana, Slovenia","Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA","Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, SI-1000, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5073792028"],"corresponding_institution_ids":["https://openalex.org/I153976015","https://openalex.org/I181547552"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.267,"has_fulltext":true,"cited_by_count":71,"citation_normalized_percentile":{"value":0.88226028,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"10","issue":"1","first_page":"265","last_page":"265"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.24240000545978546,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.24240000545978546,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.1370999962091446,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.10360000282526016,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dictyostelium-discoideum","display_name":"Dictyostelium discoideum","score":0.8728424310684204},{"id":"https://openalex.org/keywords/dictyostelium","display_name":"Dictyostelium","score":0.6472786664962769},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6301594376564026},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.6101719737052917},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5308507680892944},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4752067029476166},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.47105833888053894},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4685657322406769},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3711339831352234},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3173295855522156},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.30409860610961914}],"concepts":[{"id":"https://openalex.org/C2775969001","wikidata":"https://www.wikidata.org/wiki/Q134351","display_name":"Dictyostelium discoideum","level":3,"score":0.8728424310684204},{"id":"https://openalex.org/C2775889303","wikidata":"https://www.wikidata.org/wiki/Q17146891","display_name":"Dictyostelium","level":3,"score":0.6472786664962769},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6301594376564026},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.6101719737052917},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5308507680892944},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4752067029476166},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.47105833888053894},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4685657322406769},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3711339831352234},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3173295855522156},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.30409860610961914},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C55352822","wikidata":"https://www.wikidata.org/wiki/Q5558978","display_name":"Gibbs isotherm","level":3,"score":0.0},{"id":"https://openalex.org/C58226133","wikidata":"https://www.wikidata.org/wiki/Q1324199","display_name":"Pulmonary surfactant","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004023","descriptor_name":"Dictyostelium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004023","descriptor_name":"Dictyostelium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004023","descriptor_name":"Dictyostelium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-10-265","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-265","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-265","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19706156","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19706156","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:4b577316710d4533a920a9523e4fde52","is_oa":false,"landing_page_url":"https://doaj.org/article/4b577316710d4533a920a9523e4fde52","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 10, Iss 1, p 265 (2009)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2738683","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2738683","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-265","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-265","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-265","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1162140856","display_name":null,"funder_award_id":"P01 HD39691","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"},{"id":"https://openalex.org/G2079851762","display_name":null,"funder_award_id":"R90DA023418","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G4302912834","display_name":null,"funder_award_id":"1 R90 DA023418","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G4503829840","display_name":null,"funder_award_id":"T90 DA 022885","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G5197067802","display_name":"Tehnologije znanj za odkrivanje novih zdravilnih u\u010dinkovin: analiza in na\u010drtovnje eksperimentov v visokozmogljivostni genetiki (Slovene)","funder_award_id":"L2-1112","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"},{"id":"https://openalex.org/G566512943","display_name":null,"funder_award_id":"P01 HD039691","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"},{"id":"https://openalex.org/G5769677123","display_name":"Artificial Intelligence and Intelligent Systems","funder_award_id":"P2-0209","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"},{"id":"https://openalex.org/G600213000","display_name":"PROJECT I - Analysis of Gene Function by Parallel Phenotyping","funder_award_id":"4p01hd039691-15","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7180662844","display_name":null,"funder_award_id":"1 T90 DA022885","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"}],"funders":[{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337347","display_name":"National Institute on Drug Abuse","ror":"https://ror.org/00fq5cm18"},{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2128339470.pdf","grobid_xml":"https://content.openalex.org/works/W2128339470.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W172019652","https://openalex.org/W1492410488","https://openalex.org/W1533335653","https://openalex.org/W1546952499","https://openalex.org/W1565377632","https://openalex.org/W2014764685","https://openalex.org/W2103017472","https://openalex.org/W2105537147","https://openalex.org/W2105739196","https://openalex.org/W2112787803","https://openalex.org/W2116837061","https://openalex.org/W2122579943","https://openalex.org/W2143326696","https://openalex.org/W2143476736","https://openalex.org/W2156690217","https://openalex.org/W2160697532","https://openalex.org/W2161297153","https://openalex.org/W2166378755","https://openalex.org/W2412256481","https://openalex.org/W2482589566"],"related_works":["https://openalex.org/W2034720620","https://openalex.org/W3015698348","https://openalex.org/W2519058576","https://openalex.org/W3209588668","https://openalex.org/W2015897732","https://openalex.org/W247369369","https://openalex.org/W2399065385","https://openalex.org/W2394887779","https://openalex.org/W2066066606","https://openalex.org/W1825029112"],"abstract_inverted_index":{"BACKGROUND:":[0],"Bioinformatics":[1],"often":[2],"leverages":[3],"on":[4],"recent":[5],"advancements":[6,31],"in":[7,13,32,132],"computer":[8],"science":[9],"to":[10,27,38,80,152,204,207],"support":[11],"biologists":[12],"their":[14,56],"scientific":[15],"discovery":[16],"process.":[17],"Such":[18],"efforts":[19],"include":[20],"the":[21,40,96,156,189,196,213,220],"development":[22,221],"of":[23,85,118,175,188,222],"easy-to-use":[24],"web":[25,34,47,70,142],"interfaces":[26,184],"biomedical":[28],"databases.":[29],"Recent":[30],"interactive":[33,53,77,183],"technologies":[35],"require":[36],"us":[37],"rethink":[39],"standard":[41],"submit-and-wait":[42],"paradigm,":[43],"and":[44,52,62,101,123,149],"craft":[45],"bioinformatics":[46,177],"applications":[48,143,178,224],"that":[49,72,83,185,187,212],"share":[50],"analytical":[51],"power":[54],"with":[55,179],"desktop":[57],"relatives,":[58],"while":[59],"retaining":[60],"simplicity":[61],"availability.":[63],"RESULTS:":[64],"We":[65,210],"have":[66],"developed":[67],"dictyExpress,":[68,95],"a":[69,74,129,160,169,172],"application":[71],"features":[73],"graphical,":[75],"highly":[76],"explorative":[78,162],"interface":[79],"our":[81],"database":[82],"consists":[84],"more":[86],"than":[87],"1000":[88],"Dictyostelium":[89,197],"discoideum":[90],"gene":[91,104,107,113,131],"expression":[92,108,126],"experiments.":[93,134],"In":[94],"user":[97],"can":[98],"select":[99],"experiments":[100],"genes,":[102],"perform":[103,116],"clustering,":[105],"view":[106,112],"profiles":[109,127],"across":[110],"time,":[111],"co-expression":[114],"networks,":[115],"analyses":[117],"Gene":[119],"Ontology":[120],"term":[121],"enrichment,":[122],"simultaneously":[124],"display":[125],"for":[128,171,225],"selected":[130],"various":[133],"Most":[135],"importantly,":[136],"these":[137],"tasks":[138],"are":[139,146],"achieved":[140],"through":[141],"whose":[144],"components":[145],"seamlessly":[147],"interlinked":[148],"immediately":[150],"respond":[151],"events":[153],"triggered":[154],"by":[155],"user,":[157],"thus":[158],"providing":[159],"powerful":[161,182],"data":[163],"analysis":[164],"environment.":[165],"CONCLUSION:":[166],"dictyExpress":[167,193,217],"is":[168,201],"precursor":[170],"new":[173],"generation":[174],"web-based":[176],"simple":[180],"but":[181],"resemble":[186],"modern":[190],"desktop.":[191],"While":[192],"serves":[194],"mainly":[195],"research":[198],"community,":[199],"it":[200,206],"relatively":[202],"easy":[203],"adapt":[205],"other":[208,226],"datasets.":[209],"propose":[211],"design":[214],"ideas":[215],"behind":[216],"will":[218],"influence":[219],"similar":[223],"model":[227],"organisms.":[228]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":8}],"updated_date":"2026-08-06T08:24:18.245995","created_date":"2025-10-10T00:00:00"}
