{"id":"https://openalex.org/W2095430176","doi":"https://doi.org/10.1186/1471-2105-10-127","title":"Automated FingerPrint Background removal: FPB","display_name":"Automated FingerPrint Background removal: FPB","publication_year":2009,"publication_date":"2009-04-30","ids":{"openalex":"https://openalex.org/W2095430176","doi":"https://doi.org/10.1186/1471-2105-10-127","mag":"2095430176","pmid":"https://pubmed.ncbi.nlm.nih.gov/19405935"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-10-127","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-127","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-127","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-127","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025719945","display_name":"Simone Scalabrin","orcid":"https://orcid.org/0000-0001-8686-8385"},"institutions":[{"id":"https://openalex.org/I129043915","display_name":"University of Udine","ror":"https://ror.org/05ht0mh31","country_code":"IT","type":"education","lineage":["https://openalex.org/I129043915"]},{"id":"https://openalex.org/I4210155277","display_name":"Istituto di Genomica Applicata","ror":"https://ror.org/057w9fs93","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155277"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Simone Scalabrin","raw_affiliation_strings":["Istituto di Genomica Applicata (IGA), via J, Linussio 51, I-33100 Udine, Italy. scalabrin@appliedgenomics.org","Istituto di Genomica Applicata (IGA), Udine, Italy","Department of Mathematics and Computer Science, University of Udine, Udine, Italy"],"affiliations":[{"raw_affiliation_string":"Istituto di Genomica Applicata (IGA), via J, Linussio 51, I-33100 Udine, Italy. scalabrin@appliedgenomics.org","institution_ids":["https://openalex.org/I4210155277"]},{"raw_affiliation_string":"Istituto di Genomica Applicata (IGA), Udine, Italy","institution_ids":["https://openalex.org/I4210155277"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Udine, Udine, Italy","institution_ids":["https://openalex.org/I129043915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054301400","display_name":"Michele Morgante","orcid":"https://orcid.org/0000-0003-2591-2156"},"institutions":[{"id":"https://openalex.org/I4210155277","display_name":"Istituto di Genomica Applicata","ror":"https://ror.org/057w9fs93","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155277"]},{"id":"https://openalex.org/I129043915","display_name":"University of Udine","ror":"https://ror.org/05ht0mh31","country_code":"IT","type":"education","lineage":["https://openalex.org/I129043915"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Michele Morgante","raw_affiliation_strings":["Department of Agriculture and Environmental Sciences, University of Udine, via delle Scienze 208, I-33100, Udine, Italy","Istituto di Genomica Applicata (IGA), via J. Linussio 51, I-33100, Udine, Italy","Department of Agriculture and Environmental Sciences, University of Udine, Udine, Italy","Istituto di Genomica Applicata (IGA), Udine, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Agriculture and Environmental Sciences, University of Udine, via delle Scienze 208, I-33100, Udine, Italy","institution_ids":["https://openalex.org/I129043915"]},{"raw_affiliation_string":"Istituto di Genomica Applicata (IGA), via J. Linussio 51, I-33100, Udine, Italy","institution_ids":["https://openalex.org/I4210155277"]},{"raw_affiliation_string":"Department of Agriculture and Environmental Sciences, University of Udine, Udine, Italy","institution_ids":["https://openalex.org/I129043915"]},{"raw_affiliation_string":"Istituto di Genomica Applicata (IGA), Udine, Italy","institution_ids":["https://openalex.org/I4210155277"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042115100","display_name":"Alberto Policriti","orcid":"https://orcid.org/0000-0001-8502-5896"},"institutions":[{"id":"https://openalex.org/I129043915","display_name":"University of Udine","ror":"https://ror.org/05ht0mh31","country_code":"IT","type":"education","lineage":["https://openalex.org/I129043915"]},{"id":"https://openalex.org/I4210155277","display_name":"Istituto di Genomica Applicata","ror":"https://ror.org/057w9fs93","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155277"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alberto Policriti","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Udine, via delle Scienze 206, I-33100, Udine, Italy","Istituto di Genomica Applicata (IGA), via J. Linussio 51, I-33100, Udine, Italy","Istituto di Genomica Applicata (IGA), Udine, Italy","Department of Mathematics and Computer Science, University of Udine, Udine, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Udine, via delle Scienze 206, I-33100, Udine, Italy","institution_ids":["https://openalex.org/I129043915"]},{"raw_affiliation_string":"Istituto di Genomica Applicata (IGA), via J. Linussio 51, I-33100, Udine, Italy","institution_ids":["https://openalex.org/I4210155277"]},{"raw_affiliation_string":"Istituto di Genomica Applicata (IGA), Udine, Italy","institution_ids":["https://openalex.org/I4210155277"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Udine, Udine, Italy","institution_ids":["https://openalex.org/I129043915"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5025719945"],"corresponding_institution_ids":["https://openalex.org/I129043915","https://openalex.org/I4210155277"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.5371,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.66810752,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"10","issue":"1","first_page":"127","last_page":"127"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9857000112533569,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/fingerprint","display_name":"Fingerprint (computing)","score":0.6971210241317749},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5408717393875122},{"id":"https://openalex.org/keywords/shotgun-sequencing","display_name":"Shotgun sequencing","score":0.5123034715652466},{"id":"https://openalex.org/keywords/sequence-assembly","display_name":"Sequence assembly","score":0.48836466670036316},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4538780450820923},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3685876727104187},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3661440908908844},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2943726181983948},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18013843894004822},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08187174797058105}],"concepts":[{"id":"https://openalex.org/C2777826928","wikidata":"https://www.wikidata.org/wiki/Q3745713","display_name":"Fingerprint (computing)","level":2,"score":0.6971210241317749},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5408717393875122},{"id":"https://openalex.org/C101985253","wikidata":"https://www.wikidata.org/wiki/Q1073526","display_name":"Shotgun sequencing","level":4,"score":0.5123034715652466},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.48836466670036316},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4538780450820923},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3685876727104187},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3661440908908844},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2943726181983948},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18013843894004822},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08187174797058105},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016045","descriptor_name":"Human Genome Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016045","descriptor_name":"Human Genome Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016045","descriptor_name":"Human Genome Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020161","descriptor_name":"Physical Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020161","descriptor_name":"Physical Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020161","descriptor_name":"Physical Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D022202","descriptor_name":"Chromosomes, Artificial, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022202","descriptor_name":"Chromosomes, Artificial, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022202","descriptor_name":"Chromosomes, Artificial, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-10-127","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-127","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-127","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19405935","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19405935","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:air.uniud.it:11390/728245","is_oa":true,"landing_page_url":"http://hdl.handle.net/11390/728245","pdf_url":null,"source":{"id":"https://openalex.org/S4306401163","display_name":"Institutional Research Information System (University of Udine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I129043915","host_organization_name":"University of Udine","host_organization_lineage":["https://openalex.org/I129043915"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:50641ee4073e4602925bcd9e161dcb59","is_oa":true,"landing_page_url":"https://doaj.org/article/50641ee4073e4602925bcd9e161dcb59","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 10, Iss 1, p 127 (2009)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2689866","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2689866","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-10-127","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-10-127","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-10-127","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2095430176.pdf","grobid_xml":"https://content.openalex.org/works/W2095430176.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1971646616","https://openalex.org/W1994145712","https://openalex.org/W2001642097","https://openalex.org/W2037188908","https://openalex.org/W2067788764","https://openalex.org/W2085196410","https://openalex.org/W2107223447","https://openalex.org/W2110024389","https://openalex.org/W2110348340","https://openalex.org/W2117030637","https://openalex.org/W2118082871","https://openalex.org/W2129928118","https://openalex.org/W2150355185","https://openalex.org/W2152680529","https://openalex.org/W2158521668","https://openalex.org/W2166697723","https://openalex.org/W2167443016","https://openalex.org/W2168909179","https://openalex.org/W2171453402","https://openalex.org/W2171536529"],"related_works":["https://openalex.org/W2166654698","https://openalex.org/W2213265806","https://openalex.org/W2179715293","https://openalex.org/W1841715584","https://openalex.org/W2164536081","https://openalex.org/W1947292692","https://openalex.org/W2200318732","https://openalex.org/W180085294","https://openalex.org/W3047585652","https://openalex.org/W4224273931"],"abstract_inverted_index":{"FPB":[0,6],"is":[1],"freely":[2],"available":[3],"at":[4],"http://www.appliedgenomics.org/tools.php.":[5],"was":[7,53],"used":[8],"to":[9],"remove":[10],"the":[11,30,39],"background":[12],"from":[13],"all":[14,48],"fingerprints":[15],"of":[16,26,34,43],"three":[17],"grapevine":[18],"physical":[19],"map":[20],"projects.":[21],"The":[22],"first":[23],"project":[24],"consists":[25,33,42],"about":[27,35,44],"50,000":[28],"fingerprints,":[29,37],"second":[31],"one":[32,41],"70,000":[36],"and":[38],"third":[40],"45,000":[45],"fingerprints.":[46],"In":[47],"cases":[49],"a":[50],"successful":[51],"assembly":[52],"built.":[54]},"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2013,"cited_by_count":2}],"updated_date":"2026-03-17T17:19:04.345684","created_date":"2025-10-10T00:00:00"}