{"id":"https://openalex.org/W4360930371","doi":"https://doi.org/10.1177/14604582221146709","title":"Prescreening in oncology trials using medical records. Natural language processing applied on lung cancer multidisciplinary team meeting reports","display_name":"Prescreening in oncology trials using medical records. Natural language processing applied on lung cancer multidisciplinary team meeting reports","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4360930371","doi":"https://doi.org/10.1177/14604582221146709","pmid":"https://pubmed.ncbi.nlm.nih.gov/36964666"},"language":"en","primary_location":{"id":"doi:10.1177/14604582221146709","is_oa":true,"landing_page_url":"https://doi.org/10.1177/14604582221146709","pdf_url":null,"source":{"id":"https://openalex.org/S201800618","display_name":"Health Informatics Journal","issn_l":"1355-4743","issn":["1355-4743","1460-4582","1741-2811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Informatics Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1177/14604582221146709","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034439279","display_name":"Marie Ansoborlo","orcid":null},"institutions":[{"id":"https://openalex.org/I110017253","display_name":"Universit\u00e9 de Tours","ror":"https://ror.org/02wwzvj46","country_code":"FR","type":"education","lineage":["https://openalex.org/I110017253"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marie Ansoborlo","raw_affiliation_strings":["Medicine, Universit\u00e9 de Tours Facult\u00e9 de M\u00e9decine, Tours, France"],"raw_orcid":"https://orcid.org/0000-0002-6543-2301","affiliations":[{"raw_affiliation_string":"Medicine, Universit\u00e9 de Tours Facult\u00e9 de M\u00e9decine, Tours, France","institution_ids":["https://openalex.org/I110017253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036611931","display_name":"Christophe Gaborit","orcid":null},"institutions":[{"id":"https://openalex.org/I110017253","display_name":"Universit\u00e9 de Tours","ror":"https://ror.org/02wwzvj46","country_code":"FR","type":"education","lineage":["https://openalex.org/I110017253"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Christophe Gaborit","raw_affiliation_strings":["Medicine, Universit\u00e9 de Tours Facult\u00e9 de M\u00e9decine, Tours, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medicine, Universit\u00e9 de Tours Facult\u00e9 de M\u00e9decine, Tours, France","institution_ids":["https://openalex.org/I110017253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040540593","display_name":"Leslie Grammatico\u2010Guillon","orcid":"https://orcid.org/0000-0001-7934-8912"},"institutions":[{"id":"https://openalex.org/I110017253","display_name":"Universit\u00e9 de Tours","ror":"https://ror.org/02wwzvj46","country_code":"FR","type":"education","lineage":["https://openalex.org/I110017253"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Leslie Grammatico-Guillon","raw_affiliation_strings":["Medicine, Universit\u00e9 de Tours Facult\u00e9 de M\u00e9decine, Tours, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medicine, Universit\u00e9 de Tours Facult\u00e9 de M\u00e9decine, Tours, France","institution_ids":["https://openalex.org/I110017253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048180788","display_name":"Marc Cuggia","orcid":"https://orcid.org/0000-0001-6943-3937"},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marc Cuggia","raw_affiliation_strings":["Medecine, Universit\u00e9 de Rennes, Rennes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medecine, Universit\u00e9 de Rennes, Rennes, France","institution_ids":["https://openalex.org/I56067802"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047176448","display_name":"Guillaume Bouzill\u00e9","orcid":"https://orcid.org/0000-0002-3637-6558"},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Guillaume Bouzille","raw_affiliation_strings":["Medecine, Universit\u00e9 de Rennes, Rennes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medecine, Universit\u00e9 de Rennes, Rennes, France","institution_ids":["https://openalex.org/I56067802"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1500,"currency":"USD","value_usd":1500},"apc_paid":{"value":1500,"currency":"USD","value_usd":1500},"fwci":0.5583,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.60477913,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"29","issue":"1","first_page":"14604582221146709","last_page":"14604582221146709"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9883999824523926,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9549999833106995,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/lung-cancer","display_name":"Lung cancer","score":0.7065184116363525},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.5429685711860657},{"id":"https://openalex.org/keywords/multidisciplinary-approach","display_name":"Multidisciplinary approach","score":0.5209197402000427},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4823714792728424},{"id":"https://openalex.org/keywords/clinical-trial","display_name":"Clinical trial","score":0.46281731128692627},{"id":"https://openalex.org/keywords/multidisciplinary-team","display_name":"Multidisciplinary team","score":0.46184179186820984},{"id":"https://openalex.org/keywords/medical-physics","display_name":"Medical physics","score":0.4507203698158264},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.4182835817337036},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.4060877561569214},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.37164559960365295},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36995041370391846},{"id":"https://openalex.org/keywords/nursing","display_name":"Nursing","score":0.1206415593624115}],"concepts":[{"id":"https://openalex.org/C2776256026","wikidata":"https://www.wikidata.org/wiki/Q47912","display_name":"Lung cancer","level":2,"score":0.7065184116363525},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5429685711860657},{"id":"https://openalex.org/C22467394","wikidata":"https://www.wikidata.org/wiki/Q849359","display_name":"Multidisciplinary approach","level":2,"score":0.5209197402000427},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4823714792728424},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.46281731128692627},{"id":"https://openalex.org/C3020501284","wikidata":"https://www.wikidata.org/wiki/Q849359","display_name":"Multidisciplinary team","level":2,"score":0.46184179186820984},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.4507203698158264},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.4182835817337036},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.4060877561569214},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.37164559960365295},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36995041370391846},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.1206415593624115},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010348","descriptor_name":"Patient Care Team","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010348","descriptor_name":"Patient Care Team","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010348","descriptor_name":"Patient Care Team","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1177/14604582221146709","is_oa":true,"landing_page_url":"https://doi.org/10.1177/14604582221146709","pdf_url":null,"source":{"id":"https://openalex.org/S201800618","display_name":"Health Informatics Journal","issn_l":"1355-4743","issn":["1355-4743","1460-4582","1741-2811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Informatics Journal","raw_type":"journal-article"},{"id":"pmid:36964666","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36964666","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health informatics journal","raw_type":null},{"id":"pmh:oai:HAL:hal-04075944v1","is_oa":true,"landing_page_url":"https://hal.science/hal-04075944","pdf_url":"https://hal.science/hal-04075944v1/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Health Informatics Journal, 2023, 29 (1), pp.14604582221146709. &#x27E8;10.1177/14604582221146709&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:e06a88b84d38480aa210e949e1be97fb","is_oa":true,"landing_page_url":"https://doaj.org/article/e06a88b84d38480aa210e949e1be97fb","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Health Informatics Journal, Vol 29 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1177/14604582221146709","is_oa":true,"landing_page_url":"https://doi.org/10.1177/14604582221146709","pdf_url":null,"source":{"id":"https://openalex.org/S201800618","display_name":"Health Informatics Journal","issn_l":"1355-4743","issn":["1355-4743","1460-4582","1741-2811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Informatics Journal","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7799999713897705,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1827826689","display_name":"Lab for interoperability, integration and health big data processing","funder_award_id":"ANR-17-LCV1-0004","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320326091","display_name":"Canc\u00e9rop\u00f4le Grand Ouest","ror":null},{"id":"https://openalex.org/F4320327215","display_name":"R\u00e9gion Bretagne","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1015675232","https://openalex.org/W1554829397","https://openalex.org/W1939796399","https://openalex.org/W1978394996","https://openalex.org/W2022784448","https://openalex.org/W2067431747","https://openalex.org/W2142044899","https://openalex.org/W2145522203","https://openalex.org/W2163738899","https://openalex.org/W2197312909","https://openalex.org/W2283041611","https://openalex.org/W2337688041","https://openalex.org/W2342969114","https://openalex.org/W2916659159","https://openalex.org/W3025047276","https://openalex.org/W3187216840","https://openalex.org/W4240338964"],"related_works":["https://openalex.org/W3129183207","https://openalex.org/W3013553468","https://openalex.org/W1539375776","https://openalex.org/W4388242205","https://openalex.org/W2995282567","https://openalex.org/W3161074460","https://openalex.org/W2794642375","https://openalex.org/W3015290863","https://openalex.org/W2966506622","https://openalex.org/W204343668"],"abstract_inverted_index":{"Defining":[0],"profiles":[1],"of":[2,16,81,100,109,114,164],"patients":[3],"that":[4],"could":[5],"benefit":[6],"from":[7,64],"relevant":[8],"anti-cancer":[9,26],"treatments":[10],"is":[11],"essential.":[12],"An":[13],"increasing":[14],"number":[15],"specific":[17,25],"criteria":[18],"are":[19],"necessary":[20],"to":[21,24,31,37,43,87,131,148],"be":[22],"eligible":[23],"therapies.":[27],"This":[28],"study":[29,159],"aimed":[30],"develop":[32],"an":[33],"automated":[34],"algorithm":[35],"able":[36],"detect":[38],"patient":[39,123],"and":[40,73,111,124,135,144,167],"tumor":[41,125],"characteristics":[42,143],"reduce":[44],"the":[45,79,140,146,157,161],"time-consuming":[46],"prescreening":[47,153],"for":[48],"trial":[49],"inclusions":[50],"without":[51],"delay.":[52],"Hence,":[53],"640":[54],"anonymized":[55],"multidisciplinary":[56],"team":[57],"meetings":[58],"(MTM)":[59],"reports":[60],"concerning":[61],"lung":[62,174],"cancers":[63],"one":[65],"French":[66],"teaching":[67],"hospital":[68],"data":[69],"warehouse":[70],"between":[71],"2018":[72],"2020":[74],"were":[75,92,139],"annotated.":[76],"To":[77,151],"automate":[78],"extraction":[80],"eight":[82],"major":[83],"eligibility":[84],"criteria,":[85],"corresponding":[86],"52":[88],"classes,":[89],"regular":[90],"expressions":[91],"implemented.":[93],"The":[94],"RegEx's":[95],"evaluation":[96],"gave":[97],"a":[98,104],"F1-score":[99],"93%":[101],"in":[102,117,154],"average,":[103],"positive":[105],"predictive":[106],"value":[107,163],"(precision)":[108],"98%":[110],"sensitivity":[112],"(recall)":[113],"92%.":[115],"However,":[116],"MTM,":[118],"fill":[119],"rates":[120],"variabilities":[121],"among":[122],"information":[126],"remained":[127],"important":[128],"(from":[129],"31%":[130],"100%).":[132],"Genetic":[133],"mutations":[134],"rearrangement":[136],"test":[137],"results":[138],"least":[141],"reported":[142],"also":[145],"hardest":[147],"automatically":[149],"extract.":[150],"ease":[152],"clinical":[155],"trials,":[156],"PreScIOUs":[158],"demonstrated":[160],"additional":[162],"rule":[165],"based":[166,170],"machine":[168],"learning":[169],"methods":[171],"applied":[172],"on":[173],"cancer":[175],"MTM":[176],"reports.":[177]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
