{"id":"https://openalex.org/W4303478269","doi":"https://doi.org/10.1177/10943420221121804","title":"Language models for the prediction of SARS-CoV-2 inhibitors","display_name":"Language models for the prediction of SARS-CoV-2 inhibitors","publication_year":2022,"publication_date":"2022-10-07","ids":{"openalex":"https://openalex.org/W4303478269","doi":"https://doi.org/10.1177/10943420221121804","pmid":"https://pubmed.ncbi.nlm.nih.gov/38603308"},"language":"en","primary_location":{"id":"doi:10.1177/10943420221121804","is_oa":false,"landing_page_url":"https://doi.org/10.1177/10943420221121804","pdf_url":null,"source":{"id":"https://openalex.org/S60606485","display_name":"The International Journal of High Performance Computing Applications","issn_l":"1094-3420","issn":["1094-3420","1741-2846"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The International Journal of High Performance Computing Applications","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.osti.gov/servlets/purl/1892426","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019868556","display_name":"Andrew E. Blanchard","orcid":"https://orcid.org/0000-0001-7330-9656"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Andrew E Blanchard","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018744978","display_name":"John Gounley","orcid":null},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Gounley","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032222900","display_name":"Debsindhu Bhowmik","orcid":"https://orcid.org/0000-0001-7770-9091"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Debsindhu Bhowmik","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087960600","display_name":"Mayanka Chandrashekar","orcid":"https://orcid.org/0000-0002-3697-5972"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mayanka Chandra Shekar","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004692421","display_name":"Isaac Lyngaas","orcid":"https://orcid.org/0000-0002-1682-4309"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Isaac Lyngaas","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047655591","display_name":"Shang Gao","orcid":"https://orcid.org/0000-0003-1803-1457"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shang Gao","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051882926","display_name":"Junqi Yin","orcid":"https://orcid.org/0000-0003-3843-5520"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Junqi Yin","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006493183","display_name":"Aristeidis Tsaris","orcid":"https://orcid.org/0000-0002-7734-3349"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aristeidis Tsaris","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101916963","display_name":"Feiyi Wang","orcid":"https://orcid.org/0000-0002-0099-1559"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Feiyi Wang","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023856625","display_name":"Jens Gl\u00e4ser","orcid":"https://orcid.org/0000-0003-1852-3849"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jens Glaser","raw_affiliation_strings":["Oak Ridge National Laboratory, Oak Ridge, TN, USA"],"affiliations":[{"raw_affiliation_string":"Oak Ridge National Laboratory, Oak Ridge, TN, USA","institution_ids":["https://openalex.org/I1289243028"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5019868556"],"corresponding_institution_ids":["https://openalex.org/I1289243028"],"apc_list":null,"apc_paid":null,"fwci":3.6211,"has_fulltext":true,"cited_by_count":27,"citation_normalized_percentile":{"value":0.93883636,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"36","issue":"5-6","first_page":"587","last_page":"602"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9883999824523926,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.8628555536270142},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7269601225852966},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5767917633056641},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5517091155052185},{"id":"https://openalex.org/keywords/language-model","display_name":"Language model","score":0.5278551578521729},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5156694650650024},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.5022590160369873},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4708794057369232},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4580186605453491},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3848496079444885},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10364046692848206},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.10273396968841553},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.09735763072967529},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08618396520614624}],"concepts":[{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.8628555536270142},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7269601225852966},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5767917633056641},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5517091155052185},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.5278551578521729},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5156694650650024},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.5022590160369873},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4708794057369232},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4580186605453491},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3848496079444885},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10364046692848206},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.10273396968841553},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.09735763072967529},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08618396520614624},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1177/10943420221121804","is_oa":false,"landing_page_url":"https://doi.org/10.1177/10943420221121804","pdf_url":null,"source":{"id":"https://openalex.org/S60606485","display_name":"The International Journal of High Performance Computing Applications","issn_l":"1094-3420","issn":["1094-3420","1741-2846"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The International Journal of High Performance Computing Applications","raw_type":"journal-article"},{"id":"pmid:38603308","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38603308","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The international journal of high performance computing applications","raw_type":null},{"id":"pmh:oai:osti.gov:1892426","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1892426","pdf_url":"https://www.osti.gov/servlets/purl/1892426","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:osti.gov:1891374","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1891374","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9548488","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9548488","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Int J High Perform Comput Appl","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:osti.gov:1892426","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1892426","pdf_url":"https://www.osti.gov/servlets/purl/1892426","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.7699999809265137,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1489425746","display_name":null,"funder_award_id":"DE-AC05-00OR22725","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G1645119126","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G1719536385","display_name":null,"funder_award_id":"DE-AC05-00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G2296932962","display_name":null,"funder_award_id":"DE-AC05-00OR227","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G2366088775","display_name":null,"funder_award_id":"17-SC-20-SC","funder_id":"https://openalex.org/F4320338287","funder_display_name":"Oak Ridge National Laboratory"},{"id":"https://openalex.org/G3232922872","display_name":null,"funder_award_id":"17-SC-20-SC","funder_id":"https://openalex.org/F4320332369","funder_display_name":"National Nuclear Security Administration"},{"id":"https://openalex.org/G3299391273","display_name":null,"funder_award_id":"E-AC05-00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G4327825534","display_name":null,"funder_award_id":"DE-AC05-00OR22725","funder_id":"https://openalex.org/F4320332369","funder_display_name":"National Nuclear Security Administration"},{"id":"https://openalex.org/G4370606643","display_name":null,"funder_award_id":"DE-AC05-00OR22725","funder_id":"https://openalex.org/F4320337506","funder_display_name":"Advanced Scientific Computing Research"},{"id":"https://openalex.org/G4423657506","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320338287","funder_display_name":"Oak Ridge National Laboratory"},{"id":"https://openalex.org/G4694431782","display_name":null,"funder_award_id":"DE-AC05-00OR2272","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G5001603810","display_name":null,"funder_award_id":"17-SC-20-S","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6488227018","display_name":null,"funder_award_id":"DE-AC05-00OR227","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G6859237865","display_name":null,"funder_award_id":"17-SC-20-SC","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G691578896","display_name":null,"funder_award_id":"DE-AC05-00OR2272","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7114708214","display_name":null,"funder_award_id":"DE-AC05-00OR2272","funder_id":"https://openalex.org/F4320338287","funder_display_name":"Oak Ridge National Laboratory"},{"id":"https://openalex.org/G7995982022","display_name":null,"funder_award_id":"DE-AC05","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8052219770","display_name":null,"funder_award_id":"17-SC-20-SC","funder_id":"https://openalex.org/F4320337506","funder_display_name":"Advanced Scientific Computing Research"},{"id":"https://openalex.org/G8253304997","display_name":null,"funder_award_id":"17-SC-20-SC","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G8269158468","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G8414908677","display_name":null,"funder_award_id":"DE-AC0","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8799952057","display_name":null,"funder_award_id":"DE-AC05-00OR22","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8906985441","display_name":null,"funder_award_id":"00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G99418206","display_name":null,"funder_award_id":"39KJ95010","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320332369","display_name":"National Nuclear Security Administration","ror":"https://ror.org/03sk1we31"},{"id":"https://openalex.org/F4320337506","display_name":"Advanced Scientific Computing Research","ror":"https://ror.org/0012c7r22"},{"id":"https://openalex.org/F4320338287","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4303478269.pdf","grobid_xml":"https://content.openalex.org/works/W4303478269.grobid-xml"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W132288226","https://openalex.org/W1500036797","https://openalex.org/W1975147762","https://openalex.org/W1992156271","https://openalex.org/W2018661561","https://openalex.org/W2034549041","https://openalex.org/W2066273100","https://openalex.org/W2086286404","https://openalex.org/W2096864392","https://openalex.org/W2107160601","https://openalex.org/W2110791536","https://openalex.org/W2114162221","https://openalex.org/W2121879602","https://openalex.org/W2146465875","https://openalex.org/W2151967815","https://openalex.org/W2160592148","https://openalex.org/W2168696093","https://openalex.org/W2406943157","https://openalex.org/W2461470610","https://openalex.org/W2479609865","https://openalex.org/W2578240541","https://openalex.org/W2666522191","https://openalex.org/W2769423117","https://openalex.org/W2774185825","https://openalex.org/W2785947426","https://openalex.org/W2796306022","https://openalex.org/W2883583109","https://openalex.org/W2900694120","https://openalex.org/W2902041647","https://openalex.org/W2914542247","https://openalex.org/W2952046647","https://openalex.org/W2953128081","https://openalex.org/W2963341956","https://openalex.org/W2973114758","https://openalex.org/W2979826702","https://openalex.org/W2989615256","https://openalex.org/W2999242200","https://openalex.org/W3006889321","https://openalex.org/W3008443627","https://openalex.org/W3014476516","https://openalex.org/W3027975282","https://openalex.org/W3043461363","https://openalex.org/W3081168214","https://openalex.org/W3100839802","https://openalex.org/W3101449015","https://openalex.org/W3113182646","https://openalex.org/W3114291043","https://openalex.org/W3132640865","https://openalex.org/W3133325765","https://openalex.org/W3158755582","https://openalex.org/W3169948074","https://openalex.org/W3177500196","https://openalex.org/W3177828909","https://openalex.org/W3204998121","https://openalex.org/W4221074165","https://openalex.org/W4299959846","https://openalex.org/W6600157417","https://openalex.org/W6600424091","https://openalex.org/W6600928480","https://openalex.org/W6601211009","https://openalex.org/W6601323341","https://openalex.org/W6601375265","https://openalex.org/W6637031373","https://openalex.org/W6706152750","https://openalex.org/W6725181839"],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W2787993192","https://openalex.org/W2731899572","https://openalex.org/W4230611425","https://openalex.org/W4294635752","https://openalex.org/W4304166257","https://openalex.org/W4383066092","https://openalex.org/W2898732673","https://openalex.org/W2158269427"],"abstract_inverted_index":{"The":[0],"COVID-19":[1],"pandemic":[2],"highlights":[3],"the":[4,78,91,130,136,143],"need":[5],"for":[6,15,109,125,147],"computational":[7],"tools":[8],"to":[9,25,66,69],"automate":[10],"and":[11,27,49,107,117,132],"accelerate":[12,142],"drug":[13,29],"design":[14],"novel":[16],"protein":[17,34,101,113],"targets.":[18,150],"We":[19,37,119],"leverage":[20],"deep":[21,40],"learning":[22,41],"language":[23,42,92,137],"models":[24,141],"generate":[26],"score":[28],"candidates":[30,128],"based":[31],"on":[32,45],"predicted":[33],"binding":[35,104],"affinity.":[36],"pre-trained":[38],"a":[39,121],"model":[43,93],"(BERT)":[44],"\u223c9.6":[46],"billion":[47],"molecules":[48],"achieved":[50],"peak":[51],"performance":[52],"of":[53,85,98,100,111,135,145],"603":[54],"petaflops":[55],"in":[56],"mixed":[57],"precision.":[58],"Our":[59,139],"work":[60],"reduces":[61],"pre-training":[62],"time":[63],"from":[64],"days":[65],"hours,":[67],"compared":[68],"previous":[70],"efforts":[71],"with":[72,103],"this":[73],"architecture,":[74],"while":[75],"also":[76],"increasing":[77],"dataset":[79],"size":[80],"by":[81],"nearly":[82],"an":[83,95],"order":[84],"magnitude.":[86],"For":[87],"scoring,":[88],"we":[89],"fine-tuned":[90],"using":[94,129],"assembled":[96],"set":[97],"thousands":[99],"targets":[102],"affinity":[105],"data":[106],"searched":[108],"inhibitors":[110,146],"specific":[112],"targets,":[114],"SARS-CoV-2":[115],"Mpro":[116],"PLpro.":[118],"utilized":[120],"genetic":[122],"algorithm":[123],"approach":[124],"finding":[126],"optimal":[127],"generation":[131],"scoring":[133],"capabilities":[134],"model.":[138],"generalizable":[140],"identification":[144],"emerging":[148],"therapeutic":[149]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-15T08:11:43.952461","created_date":"2025-10-10T00:00:00"}
