{"id":"https://openalex.org/W4412118141","doi":"https://doi.org/10.1177/1088467x241290621","title":"Decision variables to be discovered in modelling high-dimensional omics data for cancer studies","display_name":"Decision variables to be discovered in modelling high-dimensional omics data for cancer studies","publication_year":2024,"publication_date":"2024-11-10","ids":{"openalex":"https://openalex.org/W4412118141","doi":"https://doi.org/10.1177/1088467x241290621"},"language":"en","primary_location":{"id":"doi:10.1177/1088467x241290621","is_oa":false,"landing_page_url":"https://doi.org/10.1177/1088467x241290621","pdf_url":null,"source":{"id":"https://openalex.org/S2498839158","display_name":"Intelligent Data Analysis","issn_l":"1088-467X","issn":["1088-467X","1571-4128"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Intelligent Data Analysis: An International Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101726282","display_name":"Feng Xie","orcid":"https://orcid.org/0000-0002-8220-778X"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Xie","raw_affiliation_strings":["School of Rail Transportation, Soochow University, Suzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Rail Transportation, Soochow University, Suzhou, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100354240","display_name":"Cheng Li","orcid":"https://orcid.org/0000-0002-1766-1409"},"institutions":[{"id":"https://openalex.org/I4210108723","display_name":"Changzhou Institute of Technology","ror":"https://ror.org/020mrfq61","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210108723"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cheng Li","raw_affiliation_strings":["School of Automotive Engineering, Changzhou Institute of Technology, Changzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Automotive Engineering, Changzhou Institute of Technology, Changzhou, China","institution_ids":["https://openalex.org/I4210108723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070894253","display_name":"Weike Lu","orcid":"https://orcid.org/0000-0003-0809-3590"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weike Lu","raw_affiliation_strings":["School of Rail Transportation, Soochow University, Suzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Rail Transportation, Soochow University, Suzhou, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100459956","display_name":"Zhen Yang","orcid":"https://orcid.org/0000-0002-5647-9976"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]},{"id":"https://openalex.org/I4210127380","display_name":"Pudong Medical Center","ror":"https://ror.org/02nptez24","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhen Yang","raw_affiliation_strings":["Center for Medical Research and Innovation of Pudong Hospital, Fudan University Pudong Medical Center, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Medical Research and Innovation of Pudong Hospital, Fudan University Pudong Medical Center, Shanghai, China","institution_ids":["https://openalex.org/I4210127380","https://openalex.org/I24943067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102956076","display_name":"Hanling Zhang","orcid":"https://orcid.org/0000-0001-5954-1424"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hanling Zhang","raw_affiliation_strings":["School of Design, Hunan University, Changsha, China<?pag \\vspace{4pt}?>","School of Design, Hunan University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Design, Hunan University, Changsha, China<?pag \\vspace{4pt}?>","institution_ids":["https://openalex.org/I16609230"]},{"raw_affiliation_string":"School of Design, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083785964","display_name":"Jie Xie","orcid":"https://orcid.org/0000-0002-4710-4275"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jie Xie","raw_affiliation_strings":["School of Rail Transportation, Soochow University, Suzhou, China"],"raw_orcid":"https://orcid.org/0000-0002-4710-4275","affiliations":[{"raw_affiliation_string":"School of Rail Transportation, Soochow University, Suzhou, China","institution_ids":["https://openalex.org/I3923682"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5083785964"],"corresponding_institution_ids":["https://openalex.org/I3923682"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.21975638,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"29","issue":"4","first_page":"835","last_page":"849"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.5212924480438232},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4693148136138916},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4432351291179657},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4199487566947937},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3668900728225708},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3094395101070404},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.292275071144104},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11021950840950012}],"concepts":[{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.5212924480438232},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4693148136138916},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4432351291179657},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4199487566947937},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3668900728225708},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3094395101070404},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.292275071144104},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11021950840950012}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1177/1088467x241290621","is_oa":false,"landing_page_url":"https://doi.org/10.1177/1088467x241290621","pdf_url":null,"source":{"id":"https://openalex.org/S2498839158","display_name":"Intelligent Data Analysis","issn_l":"1088-467X","issn":["1088-467X","1571-4128"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Intelligent Data Analysis: An International Journal","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1526230118","display_name":null,"funder_award_id":"62301353","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3681966276","display_name":null,"funder_award_id":"2021YFF0900602","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W1487425574","https://openalex.org/W1501139980","https://openalex.org/W1658952627","https://openalex.org/W1913456217","https://openalex.org/W1989576509","https://openalex.org/W2111618184","https://openalex.org/W2123649031","https://openalex.org/W2161922342","https://openalex.org/W2500798084","https://openalex.org/W2767016484","https://openalex.org/W2889180480","https://openalex.org/W3009765943","https://openalex.org/W3030237281","https://openalex.org/W3088521497","https://openalex.org/W3113251307","https://openalex.org/W3130182721","https://openalex.org/W3145769307","https://openalex.org/W3162976064","https://openalex.org/W3164651207","https://openalex.org/W3197311145","https://openalex.org/W4200075234","https://openalex.org/W4214520837","https://openalex.org/W4280559241","https://openalex.org/W4280562829","https://openalex.org/W4281724070","https://openalex.org/W4281910631","https://openalex.org/W4283320705","https://openalex.org/W4283573809","https://openalex.org/W4285605738","https://openalex.org/W4285733477","https://openalex.org/W4321598746","https://openalex.org/W4362701761","https://openalex.org/W4368372321","https://openalex.org/W4378072537","https://openalex.org/W4378716051","https://openalex.org/W4388195623","https://openalex.org/W4390618866"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W1971568933"],"abstract_inverted_index":{"High-dimensional":[0],"omics":[1,169],"data":[2,31,93,150,202],"are":[3,32,165],"often":[4],"contaminated":[5],"by":[6,12,163],"sources":[7,197],"of":[8,37,43,65,100,113,135,140,143,181,198],"unwanted":[9],"variations":[10],"caused":[11],"platforms,":[13],"batches,":[14],"or":[15,123],"other":[16],"external":[17],"factors.":[18,48],"These":[19],"interferences":[20],"and":[21,46,148],"noise":[22],"can":[23,128],"obscure":[24],"critical":[25],"signals":[26],"related":[27],"to":[28,68,145,158,178],"cancer.":[29],"Contaminated":[30],"modeled":[33],"as":[34,83],"a":[35,53,79,95],"combination":[36],"variables":[38,73,101,156],"derived":[39],"from":[40,92,104],"the":[41,76,84,105,110,133,138,179],"phenotype":[42],"interest":[44],"(POI)":[45],"confounding":[47],"To":[49],"identify":[50],"these":[51],"variables,":[52],"novel":[54],"method":[55,194],"called":[56],"Decision":[57],"Variable":[58],"Analysis":[59],"(DVA)":[60],"is":[61,67,90,102,191],"proposed.":[62],"The":[63,98,186],"novelty":[64],"DVA":[66,144,164,190],"iteratively":[69],"extract":[70],"independent":[71],"decisive":[72],"for":[74,195],"modeling":[75],"data.":[77],"Specifically,":[78],"priori":[80],"knowledge":[81],"introduced":[82],"definite":[85],"variable":[86],"linked":[87],"with":[88,173,203],"POI":[89],"removed":[91],"through":[94],"residual":[96,106],"operation.":[97],"number":[99,134,139,180],"estimated":[103],"matrix":[107,121],"based":[108],"on":[109,119,183],"zero":[111],"gradient":[112],"singular":[114],"values,":[115],"rather":[116],"than":[117],"relying":[118],"random":[120],"theory":[122],"principal":[124],"components":[125],"analysis,":[126],"which":[127],"produce":[129],"unreliable":[130],"results":[131,187],"when":[132],"features":[136,182],"exceeds":[137],"samples.":[141],"Applications":[142],"both":[146],"synthetic":[147],"real":[149],"demonstrate":[151],"superior":[152],"performance":[153],"in":[154,200],"identifying":[155],"compared":[157],"conventional":[159],"approaches.":[160],"Improvements":[161],"offered":[162],"illustrated":[166],"across":[167],"high-dimensional":[168,201],"datasets,":[170],"particularly":[171],"those":[172],"smaller":[174],"sample":[175],"sizes":[176],"relative":[177],"different":[184],"platforms.":[185],"indicate":[188],"that":[189],"an":[192],"effective":[193],"dissecting":[196],"variation":[199],"disturbances.":[204]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
