{"id":"https://openalex.org/W2113251050","doi":"https://doi.org/10.1177/1059712314529981","title":"Hidden Markov models of eastern gray squirrel ( <i>Sciurus carolinensis</i> ) alarm calls","display_name":"Hidden Markov models of eastern gray squirrel ( <i>Sciurus carolinensis</i> ) alarm calls","publication_year":2014,"publication_date":"2014-05-01","ids":{"openalex":"https://openalex.org/W2113251050","doi":"https://doi.org/10.1177/1059712314529981","mag":"2113251050"},"language":"en","primary_location":{"id":"doi:10.1177/1059712314529981","is_oa":false,"landing_page_url":"https://doi.org/10.1177/1059712314529981","pdf_url":null,"source":{"id":"https://openalex.org/S183337005","display_name":"Adaptive Behavior","issn_l":"1059-7123","issn":["1059-7123","1741-2633"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Adaptive Behavior","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073802212","display_name":"Blake A. Simmons","orcid":"https://orcid.org/0000-0002-1332-1810"},"institutions":[{"id":"https://openalex.org/I145608581","display_name":"University of Miami","ror":"https://ror.org/02dgjyy92","country_code":"US","type":"education","lineage":["https://openalex.org/I145608581"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"B Alexander Simmons","raw_affiliation_strings":["Department of Biology, University of Miami, Coral Gables, Florida, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, University of Miami, Coral Gables, Florida, USA","institution_ids":["https://openalex.org/I145608581"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051610033","display_name":"Thaddeus R. McRae","orcid":"https://orcid.org/0000-0003-0401-1332"},"institutions":[{"id":"https://openalex.org/I145608581","display_name":"University of Miami","ror":"https://ror.org/02dgjyy92","country_code":"US","type":"education","lineage":["https://openalex.org/I145608581"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thaddeus R McRae","raw_affiliation_strings":["Department of Biology, University of Miami, Coral Gables, Florida, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, University of Miami, Coral Gables, Florida, USA","institution_ids":["https://openalex.org/I145608581"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5073802212"],"corresponding_institution_ids":["https://openalex.org/I145608581"],"apc_list":null,"apc_paid":null,"fwci":0.2563,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.61459521,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"22","issue":"3","first_page":"180","last_page":"188"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11665","display_name":"Animal Vocal Communication and Behavior","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1309","display_name":"Developmental Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11665","display_name":"Animal Vocal Communication and Behavior","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1309","display_name":"Developmental Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10174","display_name":"Animal Behavior and Reproduction","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11228","display_name":"Bat Biology and Ecology Studies","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.8482877016067505},{"id":"https://openalex.org/keywords/alarm-signal","display_name":"Alarm signal","score":0.8062677383422852},{"id":"https://openalex.org/keywords/akaike-information-criterion","display_name":"Akaike information criterion","score":0.693425714969635},{"id":"https://openalex.org/keywords/alarm","display_name":"ALARM","score":0.5122100710868835},{"id":"https://openalex.org/keywords/bayesian-information-criterion","display_name":"Bayesian information criterion","score":0.4875935912132263},{"id":"https://openalex.org/keywords/sciurus-carolinensis","display_name":"Sciurus carolinensis","score":0.4796355366706848},{"id":"https://openalex.org/keywords/speech-recognition","display_name":"Speech recognition","score":0.4792064130306244},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4758845567703247},{"id":"https://openalex.org/keywords/spectrogram","display_name":"Spectrogram","score":0.45033907890319824},{"id":"https://openalex.org/keywords/hidden-semi-markov-model","display_name":"Hidden semi-Markov model","score":0.44238030910491943},{"id":"https://openalex.org/keywords/markov-model","display_name":"Markov model","score":0.4191797971725464},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3902956247329712},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.35720330476760864},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.2499047815799713},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.19268259406089783},{"id":"https://openalex.org/keywords/variable-order-markov-model","display_name":"Variable-order Markov model","score":0.15052849054336548},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1370665729045868},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.13618004322052002},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.07511118054389954}],"concepts":[{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.8482877016067505},{"id":"https://openalex.org/C124455200","wikidata":"https://www.wikidata.org/wiki/Q3745023","display_name":"Alarm signal","level":3,"score":0.8062677383422852},{"id":"https://openalex.org/C126674687","wikidata":"https://www.wikidata.org/wiki/Q1662573","display_name":"Akaike information criterion","level":2,"score":0.693425714969635},{"id":"https://openalex.org/C2779119184","wikidata":"https://www.wikidata.org/wiki/Q294350","display_name":"ALARM","level":2,"score":0.5122100710868835},{"id":"https://openalex.org/C168136583","wikidata":"https://www.wikidata.org/wiki/Q1988242","display_name":"Bayesian information criterion","level":2,"score":0.4875935912132263},{"id":"https://openalex.org/C2909803780","wikidata":"https://www.wikidata.org/wiki/Q468500","display_name":"Sciurus carolinensis","level":2,"score":0.4796355366706848},{"id":"https://openalex.org/C28490314","wikidata":"https://www.wikidata.org/wiki/Q189436","display_name":"Speech recognition","level":1,"score":0.4792064130306244},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4758845567703247},{"id":"https://openalex.org/C45273575","wikidata":"https://www.wikidata.org/wiki/Q578970","display_name":"Spectrogram","level":2,"score":0.45033907890319824},{"id":"https://openalex.org/C64939953","wikidata":"https://www.wikidata.org/wiki/Q3859882","display_name":"Hidden semi-Markov model","level":5,"score":0.44238030910491943},{"id":"https://openalex.org/C163836022","wikidata":"https://www.wikidata.org/wiki/Q6771326","display_name":"Markov model","level":3,"score":0.4191797971725464},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3902956247329712},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.35720330476760864},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.2499047815799713},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.19268259406089783},{"id":"https://openalex.org/C54907487","wikidata":"https://www.wikidata.org/wiki/Q7915688","display_name":"Variable-order Markov model","level":4,"score":0.15052849054336548},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1370665729045868},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.13618004322052002},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.07511118054389954},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1177/1059712314529981","is_oa":false,"landing_page_url":"https://doi.org/10.1177/1059712314529981","pdf_url":null,"source":{"id":"https://openalex.org/S183337005","display_name":"Adaptive Behavior","issn_l":"1059-7123","issn":["1059-7123","1741-2633"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Adaptive Behavior","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320309249","display_name":"University of Miami","ror":"https://ror.org/02dgjyy92"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W25204975","https://openalex.org/W119071925","https://openalex.org/W1606205649","https://openalex.org/W1968409302","https://openalex.org/W1970284197","https://openalex.org/W1978799052","https://openalex.org/W1987445317","https://openalex.org/W1991463159","https://openalex.org/W1992204974","https://openalex.org/W1998054262","https://openalex.org/W2001869567","https://openalex.org/W2025054870","https://openalex.org/W2030520626","https://openalex.org/W2037460931","https://openalex.org/W2045797411","https://openalex.org/W2050884075","https://openalex.org/W2057856665","https://openalex.org/W2059554261","https://openalex.org/W2061525378","https://openalex.org/W2062094196","https://openalex.org/W2062289199","https://openalex.org/W2070345953","https://openalex.org/W2081055934","https://openalex.org/W2092131043","https://openalex.org/W2103118270","https://openalex.org/W2103259730","https://openalex.org/W2118468918","https://openalex.org/W2120931486","https://openalex.org/W2121834073","https://openalex.org/W2134476090","https://openalex.org/W2140060576","https://openalex.org/W2160221150","https://openalex.org/W2169485384","https://openalex.org/W2185922657","https://openalex.org/W6685058693"],"related_works":["https://openalex.org/W1566728629","https://openalex.org/W2617987378","https://openalex.org/W1998988312","https://openalex.org/W1502087262","https://openalex.org/W3187368641","https://openalex.org/W2626271282","https://openalex.org/W3122388856","https://openalex.org/W1946191587","https://openalex.org/W2088726129","https://openalex.org/W2509820422"],"abstract_inverted_index":{"Eastern":[0],"gray":[1,119],"squirrels":[2,120],"produce":[3],"alarm":[4,25,81,130,188],"calls\u2014vocalizations":[5],"used":[6],"in":[7],"the":[8,14,24,34,37,58,73,89,124,145,149,175,181,186],"presence":[9],"of":[10,16,42,75,91,108,113,117,128,140,148,199],"danger":[11],"that":[12,185],"influence":[13,20],"behavior":[15],"some":[17],"receivers.":[18],"This":[19],"is":[21],"possible":[22],"because":[23],"calls\u2019":[26],"rate,":[27],"duration,":[28],"and":[29,36,48,95,99,111,123,144,162,167],"structure":[30],"contain":[31,51],"information":[32,52],"about":[33],"threat":[35],"caller.":[38],"Gray":[39],"squirrels\u2019":[40,187],"mix":[41],"different":[43],"structural":[44],"call":[45,82,131,177],"types":[46],"(kuks":[47],"quaas)":[49],"could":[50],"on":[53,136],"potential":[54],"internal":[55],"influences":[56],"within":[57],"squirrel.":[59],"Hidden":[60],"Markov":[61],"models":[62],"(HMMs)":[63],"are":[64,191],"ideal":[65],"tools":[66],"to":[67,101,104,152],"investigate":[68],"whether":[69],"hidden":[70],"states":[71],"explain":[72],"frequencies":[74,178],"kuks":[76],"versus":[77],"quaas":[78],"throughout":[79],"an":[80,92],"sequence.":[83],"In":[84],"this":[85],"study,":[86],"we":[87],"compare":[88],"ability":[90],"iid":[93],"(independent":[94],"identically":[96],"distributed)":[97],"model":[98,154],"two-":[100],"six-state":[102],"HMMs":[103,141],"represent":[105],"observed":[106,150,176],"sequences":[107,151,190],"kukking,":[109],"quaaing,":[110],"periods":[112],"silence.":[114],"Audio":[115],"recordings":[116],"44":[118],"were":[121,142],"collected":[122],"first":[125],"30":[126],"s":[127],"each":[129,153],"sequence":[132],"was":[133,155],"coded":[134],"based":[135],"spectrograms.":[137],"A":[138],"number":[139],"fitted,":[143],"overall":[146],"fit":[147,174],"assessed":[156],"using":[157],"Akaike\u2019s":[158],"Information":[159,164],"Criterion":[160,165],"(AIC)":[161],"Bayesian":[163],"(BIC),":[166],"Monte":[168],"Carlo":[169],"methods.":[170],"The":[171],"five-state":[172],"HMM":[173],"better":[179],"than":[180],"other":[182],"models,":[183],"suggesting":[184],"calling":[189],"influenced":[192],"by":[193],"a":[194],"more":[195],"complex":[196],"temporal":[197],"sequencing":[198],"acoustic":[200],"units.":[201]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
