{"id":"https://openalex.org/W1990278184","doi":"https://doi.org/10.1177/016555150002600201","title":"Bioinformatics applications of information extraction from scientific journal articles","display_name":"Bioinformatics applications of information extraction from scientific journal articles","publication_year":2000,"publication_date":"2000-04-01","ids":{"openalex":"https://openalex.org/W1990278184","doi":"https://doi.org/10.1177/016555150002600201","mag":"1990278184"},"language":"en","primary_location":{"id":"doi:10.1177/016555150002600201","is_oa":false,"landing_page_url":"https://doi.org/10.1177/016555150002600201","pdf_url":null,"source":{"id":"https://openalex.org/S68913162","display_name":"Journal of Information Science","issn_l":"0165-5515","issn":["0165-5515","1741-6485"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Information Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083798123","display_name":"Kevin Humphreys","orcid":null},"institutions":[{"id":"https://openalex.org/I91136226","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044","country_code":"GB","type":"education","lineage":["https://openalex.org/I91136226"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Kevin Humphreys","raw_affiliation_strings":["University of Sheffield, UK,"],"affiliations":[{"raw_affiliation_string":"University of Sheffield, UK,","institution_ids":["https://openalex.org/I91136226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047947755","display_name":"George Demetriou","orcid":"https://orcid.org/0000-0002-1766-1652"},"institutions":[{"id":"https://openalex.org/I91136226","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044","country_code":"GB","type":"education","lineage":["https://openalex.org/I91136226"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"George Demetriou","raw_affiliation_strings":["University of Sheffield, UK,"],"affiliations":[{"raw_affiliation_string":"University of Sheffield, UK,","institution_ids":["https://openalex.org/I91136226"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040587162","display_name":"Robert Gaizauskas","orcid":"https://orcid.org/0000-0002-3356-5126"},"institutions":[{"id":"https://openalex.org/I91136226","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044","country_code":"GB","type":"education","lineage":["https://openalex.org/I91136226"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Robert Gaizauskas","raw_affiliation_strings":["University of Sheffield, UK,"],"affiliations":[{"raw_affiliation_string":"University of Sheffield, UK,","institution_ids":["https://openalex.org/I91136226"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5083798123"],"corresponding_institution_ids":["https://openalex.org/I91136226"],"apc_list":null,"apc_paid":null,"fwci":0.239,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.52122854,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"26","issue":"2","first_page":"75","last_page":"85"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.978600025177002,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.978600025177002,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12016","display_name":"Web Data Mining and Analysis","score":0.9282000064849854,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9230999946594238,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.6847955584526062},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6511131525039673},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.584662139415741},{"id":"https://openalex.org/keywords/agency","display_name":"Agency (philosophy)","score":0.5694528818130493},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4040023982524872},{"id":"https://openalex.org/keywords/sociology","display_name":"Sociology","score":0.13359138369560242},{"id":"https://openalex.org/keywords/social-science","display_name":"Social science","score":0.07111003994941711}],"concepts":[{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.6847955584526062},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6511131525039673},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.584662139415741},{"id":"https://openalex.org/C108170787","wikidata":"https://www.wikidata.org/wiki/Q3951828","display_name":"Agency (philosophy)","level":2,"score":0.5694528818130493},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4040023982524872},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.13359138369560242},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.07111003994941711}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1177/016555150002600201","is_oa":false,"landing_page_url":"https://doi.org/10.1177/016555150002600201","pdf_url":null,"source":{"id":"https://openalex.org/S68913162","display_name":"Journal of Information Science","issn_l":"0165-5515","issn":["0165-5515","1741-6485"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Information Science","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.46000000834465027,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320342","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1966041739","https://openalex.org/W2008112715","https://openalex.org/W2047283406","https://openalex.org/W2077180437","https://openalex.org/W2085277871","https://openalex.org/W2108067237","https://openalex.org/W2157317150","https://openalex.org/W2170825071","https://openalex.org/W2341078838"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W4391913857","https://openalex.org/W2350741829","https://openalex.org/W2530322880"],"abstract_inverted_index":{"Information":[0],"extraction":[1,48,71,108],"technology,":[2],"as":[3],"defined":[4],"and":[5,30,90,113],"developed":[6],"through":[7],"the":[8,41,47,56,76,93,122],"US":[9],"Defense":[10],"Advanced":[11],"Research":[12],"Projects":[13],"Agency":[14],"(DARPA)":[15],"Message":[16],"Understanding":[17],"Conferences":[18],"(MUCs),":[19],"has":[20,79],"proved":[21],"successful":[22],"at":[23],"extracting":[24],"information":[25,50,70,107],"primarily":[26,31],"from":[27,51],"newswire":[28],"texts":[29],"in":[32,55,75],"domains":[33],"concerned":[34,87],"with":[35,88,95],"human":[36],"activity.":[37],"In":[38,63],"this":[39,44],"paper,":[40],"application":[42],"of":[43,49,58,121],"technology":[45],"to":[46,73,99,118],"scientific":[52],"journal":[53],"papers":[54],"area":[57],"molecular":[59],"biology":[60],"is":[61,66],"considered.":[62],"particular,":[64],"it":[65],"described":[67],"how":[68],"an":[69],"designed":[72],"participate":[74],"MUC":[77],"exercises":[78],"been":[80],"modified":[81],"for":[82,104,116],"two":[83],"bioinformatics":[84],"applications:":[85],"one":[86],"enzyme":[89],"metabolic":[91],"pathways;":[92],"other":[94],"protein":[96],"structure.":[97],"Progress":[98],"date":[100],"provides":[101],"convincing":[102],"grounds":[103],"believing":[105],"that":[106],"techniques":[109],"will":[110],"deliver":[111],"novel":[112],"effective":[114],"ways":[115],"scientists":[117],"make":[119],"use":[120],"core":[123],"literature":[124],"which":[125],"defines":[126],"their":[127],"disciplines.":[128]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
