{"id":"https://openalex.org/W2170122529","doi":"https://doi.org/10.1177/0037549703040939","title":"An Overview of CellML 1.1, a Biological Model Description Language","display_name":"An Overview of CellML 1.1, a Biological Model Description Language","publication_year":2003,"publication_date":"2003-12-01","ids":{"openalex":"https://openalex.org/W2170122529","doi":"https://doi.org/10.1177/0037549703040939","mag":"2170122529"},"language":"en","primary_location":{"id":"doi:10.1177/0037549703040939","is_oa":false,"landing_page_url":"https://doi.org/10.1177/0037549703040939","pdf_url":null,"source":{"id":"https://openalex.org/S32573412","display_name":"SIMULATION","issn_l":"0037-5497","issn":["0037-5497","1741-3133"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SIMULATION","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036023972","display_name":"Autumn Cuellar","orcid":null},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]}],"countries":["NZ"],"is_corresponding":true,"raw_author_name":"Autumn A. Cuellar","raw_affiliation_strings":["The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand,"],"affiliations":[{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand,","institution_ids":["https://openalex.org/I154130895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105570389","display_name":"Catherine M. Lloyd","orcid":null},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I39854758","display_name":"Auckland University of Technology","ror":"https://ror.org/01zvqw119","country_code":"NZ","type":"education","lineage":["https://openalex.org/I39854758"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"Catherine M. Lloyd","raw_affiliation_strings":["The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand"],"affiliations":[{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I39854758"]},{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113689138","display_name":"Poul Nielsen","orcid":null},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I39854758","display_name":"Auckland University of Technology","ror":"https://ror.org/01zvqw119","country_code":"NZ","type":"education","lineage":["https://openalex.org/I39854758"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"Poul F. Nielsen","raw_affiliation_strings":["The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand"],"affiliations":[{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I39854758"]},{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021558708","display_name":"David Bullivant","orcid":null},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I39854758","display_name":"Auckland University of Technology","ror":"https://ror.org/01zvqw119","country_code":"NZ","type":"education","lineage":["https://openalex.org/I39854758"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"David P. Bullivant","raw_affiliation_strings":["The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand"],"affiliations":[{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I39854758"]},{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086460310","display_name":"David Nickerson","orcid":"https://orcid.org/0000-0003-4667-9779"},"institutions":[{"id":"https://openalex.org/I39854758","display_name":"Auckland University of Technology","ror":"https://ror.org/01zvqw119","country_code":"NZ","type":"education","lineage":["https://openalex.org/I39854758"]},{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"David P. Nickerson","raw_affiliation_strings":["The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand"],"affiliations":[{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I39854758"]},{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064457425","display_name":"Peter Hunter","orcid":"https://orcid.org/0000-0001-9665-4145"},"institutions":[{"id":"https://openalex.org/I39854758","display_name":"Auckland University of Technology","ror":"https://ror.org/01zvqw119","country_code":"NZ","type":"education","lineage":["https://openalex.org/I39854758"]},{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"Peter J. Hunter","raw_affiliation_strings":["The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand"],"affiliations":[{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019                        Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I39854758"]},{"raw_affiliation_string":"The Bioengineering Institute, University of Auckland, Private Bag 92019 Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5036023972"],"corresponding_institution_ids":["https://openalex.org/I154130895"],"apc_list":null,"apc_paid":null,"fwci":2.8595,"has_fulltext":false,"cited_by_count":351,"citation_normalized_percentile":{"value":0.91234412,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"79","issue":"12","first_page":"740","last_page":"747"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9725000262260437,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9660000205039978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7477105855941772},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.6521950960159302},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.5816769599914551},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.48568663001060486},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.46935969591140747},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3624293804168701},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.33786994218826294},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.165990948677063}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7477105855941772},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.6521950960159302},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.5816769599914551},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.48568663001060486},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.46935969591140747},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3624293804168701},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.33786994218826294},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.165990948677063},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1177/0037549703040939","is_oa":false,"landing_page_url":"https://doi.org/10.1177/0037549703040939","pdf_url":null,"source":{"id":"https://openalex.org/S32573412","display_name":"SIMULATION","issn_l":"0037-5497","issn":["0037-5497","1741-3133"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SIMULATION","raw_type":"journal-article"},{"id":"pmh:oai:researchspace.auckland.ac.nz:2292/7628","is_oa":false,"landing_page_url":"https://hdl.handle.net/2292/7628","pdf_url":null,"source":{"id":"https://openalex.org/S7407055463","display_name":"ResearchSpace (University of Auckland)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I154130895","host_organization_name":"University of Auckland","host_organization_lineage":["https://openalex.org/I154130895"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W603759476","https://openalex.org/W2089562567","https://openalex.org/W2128785706","https://openalex.org/W2150908245","https://openalex.org/W2182187130","https://openalex.org/W2412992565","https://openalex.org/W2615225777","https://openalex.org/W2917274453"],"related_works":["https://openalex.org/W2058118494","https://openalex.org/W2392768766","https://openalex.org/W2382021449","https://openalex.org/W2095118173","https://openalex.org/W2106424170","https://openalex.org/W1985426483","https://openalex.org/W2501188010","https://openalex.org/W4299935056","https://openalex.org/W2010935248","https://openalex.org/W2768810474"],"abstract_inverted_index":{"CellML":[0,18,40,52,60],"is":[1,42,89],"an":[2],"XML-based":[3],"exchange":[4],"format":[5,44],"developed":[6],"by":[7],"the":[8,68],"University":[9],"of":[10,31,67,73,78],"Auckland":[11],"in":[12,57],"collaboration":[13],"with":[14,59],"Physiome":[15],"Sciences,":[16],"Inc.":[17],"1.1":[19,53],"has":[20],"a":[21,25,43,50,64],"component-based":[22],"architecture":[23],"allowing":[24],"modeller":[26],"to":[27,62],"build":[28],"complex":[29],"systems":[30],"models":[32,88],"that":[33],"expand":[34],"and":[35,70,85],"reuse":[36],"previously":[37],"published":[38],"models.":[39,75],"Metadata":[41,61],"for":[45,49],"encoding":[46],"contextual":[47],"information":[48],"model.":[51],"can":[54],"be":[55],"used":[56],"conjunction":[58],"provide":[63],"complete":[65],"description":[66],"structure":[69],"underlying":[71],"mathematics":[72],"biological":[74],"A":[76],"repository":[77],"over":[79],"200":[80],"electrophysiological,":[81],"mechanical,":[82],"signal":[83],"transduction,":[84],"metabolic":[86],"pathway":[87],"available":[90],"at":[91],"www.cellml.org.":[92]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":20},{"year":2022,"cited_by_count":13},{"year":2021,"cited_by_count":29},{"year":2020,"cited_by_count":25},{"year":2019,"cited_by_count":21},{"year":2018,"cited_by_count":21},{"year":2017,"cited_by_count":16},{"year":2016,"cited_by_count":16},{"year":2015,"cited_by_count":18},{"year":2014,"cited_by_count":15},{"year":2013,"cited_by_count":25},{"year":2012,"cited_by_count":11}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
