{"id":"https://openalex.org/W4211257569","doi":"https://doi.org/10.1162/qss_a_00181","title":"The structural shift and collaboration capacity in GenBank Networks: A longitudinal study","display_name":"The structural shift and collaboration capacity in GenBank Networks: A longitudinal study","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4211257569","doi":"https://doi.org/10.1162/qss_a_00181","pmid":"https://pubmed.ncbi.nlm.nih.gov/35434639"},"language":"en","primary_location":{"id":"doi:10.1162/qss_a_00181","is_oa":true,"landing_page_url":"https://doi.org/10.1162/qss_a_00181","pdf_url":"https://direct.mit.edu/qss/article-pdf/3/1/174/2008383/qss_a_00181.pdf","source":{"id":"https://openalex.org/S4210195326","display_name":"Quantitative Science Studies","issn_l":"2641-3337","issn":["2641-3337"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Science Studies","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://direct.mit.edu/qss/article-pdf/3/1/174/2008383/qss_a_00181.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041928722","display_name":"Jian Qin","orcid":"https://orcid.org/0000-0002-7094-2867"},"institutions":[{"id":"https://openalex.org/I70983195","display_name":"Syracuse University","ror":"https://ror.org/025r5qe02","country_code":"US","type":"education","lineage":["https://openalex.org/I70983195"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jian Qin","raw_affiliation_strings":["School of Information Studies, Syracuse University, Syracuse, NY"],"raw_orcid":"https://orcid.org/0000-0002-7094-2867","affiliations":[{"raw_affiliation_string":"School of Information Studies, Syracuse University, Syracuse, NY","institution_ids":["https://openalex.org/I70983195"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058044503","display_name":"Jeff Hemsley","orcid":"https://orcid.org/0000-0001-9276-6983"},"institutions":[{"id":"https://openalex.org/I70983195","display_name":"Syracuse University","ror":"https://ror.org/025r5qe02","country_code":"US","type":"education","lineage":["https://openalex.org/I70983195"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeff Hemsley","raw_affiliation_strings":["School of Information Studies, Syracuse University, Syracuse, NY"],"raw_orcid":"https://orcid.org/0000-0001-9276-6983","affiliations":[{"raw_affiliation_string":"School of Information Studies, Syracuse University, Syracuse, NY","institution_ids":["https://openalex.org/I70983195"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022757536","display_name":"Sarah Bratt","orcid":"https://orcid.org/0000-0002-3642-4425"},"institutions":[{"id":"https://openalex.org/I70983195","display_name":"Syracuse University","ror":"https://ror.org/025r5qe02","country_code":"US","type":"education","lineage":["https://openalex.org/I70983195"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarah E. Bratt","raw_affiliation_strings":["School of Information Studies, Syracuse University, Syracuse, NY"],"raw_orcid":"https://orcid.org/0000-0002-3642-4425","affiliations":[{"raw_affiliation_string":"School of Information Studies, Syracuse University, Syracuse, NY","institution_ids":["https://openalex.org/I70983195"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5041928722"],"corresponding_institution_ids":["https://openalex.org/I70983195"],"apc_list":{"value":800,"currency":"USD","value_usd":800},"apc_paid":{"value":800,"currency":"USD","value_usd":800},"fwci":0.7514,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.68172928,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":"3","issue":"1","first_page":"174","last_page":"193"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9753000140190125,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10102","display_name":"scientometrics and bibliometrics research","score":0.9681000113487244,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cyberinfrastructure","display_name":"Cyberinfrastructure","score":0.8419556617736816},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.793642520904541},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6418924927711487},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6338269114494324},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.5100044012069702},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.47763529419898987},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3517115116119385}],"concepts":[{"id":"https://openalex.org/C2776397876","wikidata":"https://www.wikidata.org/wiki/Q1450531","display_name":"Cyberinfrastructure","level":2,"score":0.8419556617736816},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.793642520904541},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6418924927711487},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6338269114494324},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.5100044012069702},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.47763529419898987},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3517115116119385},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1162/qss_a_00181","is_oa":true,"landing_page_url":"https://doi.org/10.1162/qss_a_00181","pdf_url":"https://direct.mit.edu/qss/article-pdf/3/1/174/2008383/qss_a_00181.pdf","source":{"id":"https://openalex.org/S4210195326","display_name":"Quantitative Science Studies","issn_l":"2641-3337","issn":["2641-3337"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Science Studies","raw_type":"journal-article"},{"id":"pmid:35434639","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35434639","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative science studies","raw_type":null},{"id":"pmh:oai:doaj.org/article:03f6d5bf9f174f86a7180df5020f3dcf","is_oa":false,"landing_page_url":"https://doaj.org/article/03f6d5bf9f174f86a7180df5020f3dcf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Quantitative Science Studies, Vol 3, Iss 1 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9012484","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9012484","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Quant Sci Stud","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1162/qss_a_00181","is_oa":true,"landing_page_url":"https://doi.org/10.1162/qss_a_00181","pdf_url":"https://direct.mit.edu/qss/article-pdf/3/1/174/2008383/qss_a_00181.pdf","source":{"id":"https://openalex.org/S4210195326","display_name":"Quantitative Science Studies","issn_l":"2641-3337","issn":["2641-3337"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Science Studies","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4300000071525574,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G1389541676","display_name":null,"funder_award_id":"1561348","funder_id":"https://openalex.org/F4320332173","funder_display_name":"Directorate for Social, Behavioral and Economic Sciences"},{"id":"https://openalex.org/G2979743649","display_name":null,"funder_award_id":"R01 GM137409","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7940157561","display_name":null,"funder_award_id":"1R01GM137409","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320332173","display_name":"Directorate for Social, Behavioral and Economic Sciences","ror":"https://ror.org/03h7mcc28"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W1546171873","https://openalex.org/W1548849615","https://openalex.org/W1564876325","https://openalex.org/W1964941055","https://openalex.org/W1966474073","https://openalex.org/W1971421925","https://openalex.org/W1995213405","https://openalex.org/W2000042664","https://openalex.org/W2008620264","https://openalex.org/W2029173860","https://openalex.org/W2112090702","https://openalex.org/W2112564748","https://openalex.org/W2124637492","https://openalex.org/W2125315567","https://openalex.org/W2126843657","https://openalex.org/W2145845082","https://openalex.org/W2164485997","https://openalex.org/W2168595914","https://openalex.org/W2169736587","https://openalex.org/W2176699305","https://openalex.org/W2399869838","https://openalex.org/W2497249804","https://openalex.org/W2604162602","https://openalex.org/W2620485168","https://openalex.org/W2623655084","https://openalex.org/W2743656265","https://openalex.org/W2802423463","https://openalex.org/W2889191490","https://openalex.org/W2899362640","https://openalex.org/W3100447784","https://openalex.org/W3103362336","https://openalex.org/W4214502461","https://openalex.org/W4230606671","https://openalex.org/W4236459334","https://openalex.org/W4243596557","https://openalex.org/W4244331047","https://openalex.org/W4361979918","https://openalex.org/W6608852248","https://openalex.org/W6676598616","https://openalex.org/W6764900363"],"related_works":["https://openalex.org/W273500195","https://openalex.org/W2043019925","https://openalex.org/W4236056781","https://openalex.org/W2808533663","https://openalex.org/W2148010638","https://openalex.org/W2010185761","https://openalex.org/W1993050440","https://openalex.org/W1978317178","https://openalex.org/W3186737914","https://openalex.org/W2767154380"],"abstract_inverted_index":{"Metadata":[0],"in":[1,26],"scientific":[2],"data":[3,11,19,27,74,110],"repositories":[4,28],"such":[5],"as":[6,124,126],"GenBank":[7,46,62],"contain":[8],"links":[9],"between":[10],"submissions":[12],"and":[13,59,69,86,96,138,143],"related":[14],"publications.":[15],"As":[16],"a":[17,45],"new":[18,119,128],"source":[20],"for":[21,30,101,130],"studying":[22],"collaboration":[23,37,63,84,103,122],"networks,":[24],"metadata":[25,47,107],"compensate":[29],"the":[31,42,57,80,88,109,114,132],"limitations":[32],"of":[33,61,72,83,90,121,134,136],"publication-based":[34],"research":[35],"on":[36],"networks.":[38],"This":[39],"paper":[40],"reports":[41],"findings":[43],"from":[44,65,108],"analytics":[48],"project.":[49],"We":[50],"used":[51],"network":[52,92],"science":[53,144],"methods":[54],"to":[55,78],"uncover":[56],"structures":[58,93],"dynamics":[60],"networks":[64,85,123],"1992-2018.":[66],"The":[67],"longitudinality":[68],"large":[70],"scale":[71],"this":[73],"collection":[75],"allowed":[76],"us":[77],"unravel":[79],"evolution":[81],"history":[82],"identify":[87],"trend":[89],"flattening":[91],"over":[94],"time":[95],"optimal":[97],"assortative":[98],"mixing":[99],"range":[100],"enhancing":[102],"capacity.":[104],"By":[105],"incorporating":[106],"production":[111],"stage":[112],"with":[113],"publication":[115],"stage,":[116],"we":[117],"uncovered":[118],"characteristics":[120],"well":[125],"developed":[127],"metrics":[129],"assessing":[131],"effectiveness":[133],"enablers":[135],"collaboration-scientific":[137],"technical":[139],"human":[140],"capital,":[141],"cyberinfrastructure,":[142],"policy.":[145]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2}],"updated_date":"2026-06-25T08:15:23.626066","created_date":"2022-02-13T00:00:00"}
