{"id":"https://openalex.org/W3132350608","doi":"https://doi.org/10.1162/neco_a_01375","title":"Parameter Estimation in Multiple Dynamic Synaptic Coupling Model Using Bayesian Point Process State-Space Modeling Framework","display_name":"Parameter Estimation in Multiple Dynamic Synaptic Coupling Model Using Bayesian Point Process State-Space Modeling Framework","publication_year":2021,"publication_date":"2021-02-23","ids":{"openalex":"https://openalex.org/W3132350608","doi":"https://doi.org/10.1162/neco_a_01375","mag":"3132350608","pmid":"https://pubmed.ncbi.nlm.nih.gov/33617745"},"language":"en","primary_location":{"id":"doi:10.1162/neco_a_01375","is_oa":false,"landing_page_url":"https://doi.org/10.1162/neco_a_01375","pdf_url":null,"source":{"id":"https://openalex.org/S207023548","display_name":"Neural Computation","issn_l":"0899-7667","issn":["0899-7667","1530-888X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Computation","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006217709","display_name":"Yalda Amidi","orcid":"https://orcid.org/0000-0001-6842-0034"},"institutions":[{"id":"https://openalex.org/I170013655","display_name":"Isfahan University of Technology","ror":"https://ror.org/00af3sa43","country_code":"IR","type":"education","lineage":["https://openalex.org/I170013655"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["IR","US"],"is_corresponding":true,"raw_author_name":"Yalda Amidi","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran, and Department of Neurology, Massachusetts General Hospital, and Harvard Medical School, Boston, MA 02114 U.S.A. yamidi@mgh.harvard.edu"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran, and Department of Neurology, Massachusetts General Hospital, and Harvard Medical School, Boston, MA 02114 U.S.A. yamidi@mgh.harvard.edu","institution_ids":["https://openalex.org/I170013655","https://openalex.org/I136199984","https://openalex.org/I4210087915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101589138","display_name":"Behzad Nazari","orcid":"https://orcid.org/0000-0001-7525-5014"},"institutions":[{"id":"https://openalex.org/I170013655","display_name":"Isfahan University of Technology","ror":"https://ror.org/00af3sa43","country_code":"IR","type":"education","lineage":["https://openalex.org/I170013655"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Behzad Nazari","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran nazari@iut.ac.ir"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran nazari@iut.ac.ir","institution_ids":["https://openalex.org/I170013655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073203585","display_name":"S. Sadri","orcid":"https://orcid.org/0000-0002-3954-5089"},"institutions":[{"id":"https://openalex.org/I170013655","display_name":"Isfahan University of Technology","ror":"https://ror.org/00af3sa43","country_code":"IR","type":"education","lineage":["https://openalex.org/I170013655"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Saeid Sadri","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran sadri@iut.ac.ir"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran sadri@iut.ac.ir","institution_ids":["https://openalex.org/I170013655"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101909915","display_name":"Ali Yousefi","orcid":"https://orcid.org/0000-0002-2405-9934"},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ali Yousefi","raw_affiliation_strings":["Department of Computer Science, Worcester Polytechnic Institute, Worcester, MA 01609, U.S.A. ayousefi@wpi.edu"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Worcester Polytechnic Institute, Worcester, MA 01609, U.S.A. ayousefi@wpi.edu","institution_ids":["https://openalex.org/I107077323"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5006217709","https://openalex.org/A5073203585","https://openalex.org/A5101589138","https://openalex.org/A5101909915"],"corresponding_institution_ids":["https://openalex.org/I107077323","https://openalex.org/I136199984","https://openalex.org/I170013655","https://openalex.org/I4210087915"],"apc_list":null,"apc_paid":null,"fwci":1.515,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.80422503,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"33","issue":"5","first_page":"1269","last_page":"1299"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10502","display_name":"Advanced Memory and Neural Computing","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10077","display_name":"Neuroscience and Neuropharmacology Research","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6099119782447815},{"id":"https://openalex.org/keywords/point-process","display_name":"Point process","score":0.5515291690826416},{"id":"https://openalex.org/keywords/coupling","display_name":"Coupling (piping)","score":0.5312471389770508},{"id":"https://openalex.org/keywords/state-space","display_name":"State space","score":0.5075541734695435},{"id":"https://openalex.org/keywords/parameter-space","display_name":"Parameter space","score":0.47086775302886963},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.4381732940673828},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29791855812072754},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.17008095979690552}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6099119782447815},{"id":"https://openalex.org/C88871306","wikidata":"https://www.wikidata.org/wiki/Q7208287","display_name":"Point process","level":2,"score":0.5515291690826416},{"id":"https://openalex.org/C131584629","wikidata":"https://www.wikidata.org/wiki/Q4308705","display_name":"Coupling (piping)","level":2,"score":0.5312471389770508},{"id":"https://openalex.org/C72434380","wikidata":"https://www.wikidata.org/wiki/Q230930","display_name":"State space","level":2,"score":0.5075541734695435},{"id":"https://openalex.org/C73586568","wikidata":"https://www.wikidata.org/wiki/Q2600211","display_name":"Parameter space","level":2,"score":0.47086775302886963},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.4381732940673828},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29791855812072754},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.17008095979690552},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1162/neco_a_01375","is_oa":false,"landing_page_url":"https://doi.org/10.1162/neco_a_01375","pdf_url":null,"source":{"id":"https://openalex.org/S207023548","display_name":"Neural Computation","issn_l":"0899-7667","issn":["0899-7667","1530-888X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Computation","raw_type":"journal-article"},{"id":"pmid:33617745","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33617745","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural computation","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":63,"referenced_works":["https://openalex.org/W95577512","https://openalex.org/W1483307070","https://openalex.org/W1523985187","https://openalex.org/W1582091054","https://openalex.org/W1586180564","https://openalex.org/W1605283609","https://openalex.org/W1898014694","https://openalex.org/W1965710996","https://openalex.org/W1977997282","https://openalex.org/W1983276223","https://openalex.org/W1986870707","https://openalex.org/W1999695968","https://openalex.org/W2010081877","https://openalex.org/W2010374880","https://openalex.org/W2010441486","https://openalex.org/W2011525418","https://openalex.org/W2013230900","https://openalex.org/W2016765436","https://openalex.org/W2020934227","https://openalex.org/W2031195633","https://openalex.org/W2036426301","https://openalex.org/W2043437580","https://openalex.org/W2046278043","https://openalex.org/W2047984988","https://openalex.org/W2057841956","https://openalex.org/W2068782468","https://openalex.org/W2074810004","https://openalex.org/W2084259975","https://openalex.org/W2085537907","https://openalex.org/W2094227853","https://openalex.org/W2100260601","https://openalex.org/W2109843705","https://openalex.org/W2110242299","https://openalex.org/W2112246597","https://openalex.org/W2129983824","https://openalex.org/W2134892157","https://openalex.org/W2141088557","https://openalex.org/W2144398166","https://openalex.org/W2149610534","https://openalex.org/W2162019295","https://openalex.org/W2169347074","https://openalex.org/W2262841875","https://openalex.org/W2497431972","https://openalex.org/W2577156463","https://openalex.org/W2589632792","https://openalex.org/W2607821547","https://openalex.org/W2733392463","https://openalex.org/W2756390111","https://openalex.org/W2785607024","https://openalex.org/W2790480113","https://openalex.org/W2898774239","https://openalex.org/W2952354084","https://openalex.org/W4210310779","https://openalex.org/W4237257501","https://openalex.org/W4246508603","https://openalex.org/W4247717705","https://openalex.org/W4247763225","https://openalex.org/W4396738421","https://openalex.org/W6655473528","https://openalex.org/W6671921212","https://openalex.org/W6680994610","https://openalex.org/W6724205559","https://openalex.org/W6755645082"],"related_works":["https://openalex.org/W1968537504","https://openalex.org/W1605128151","https://openalex.org/W2225046392","https://openalex.org/W4230044405","https://openalex.org/W1979636863","https://openalex.org/W2949789807","https://openalex.org/W4225648594","https://openalex.org/W2116442787","https://openalex.org/W2151729646","https://openalex.org/W2289097272"],"abstract_inverted_index":{"It":[0],"is":[1,40,47,63,83,93],"of":[2,10,28,77,87,96,117,134,142,148,185,206,214,220,224,237,244,264,282,288],"great":[3],"interest":[4],"to":[5,50,129,153,168,201,217],"characterize":[6,169],"the":[7,25,74,78,85,118,162,183,189,203,207,212,218,222,238,250,262,265,269,279],"spiking":[8,26,155],"activity":[9,27],"individual":[11],"neurons":[12],"in":[13,57,68,90,100,268],"a":[14,34,41,113,122,130,138,146,158,174,233,242,286],"cell":[15],"ensemble.":[16],"Many":[17],"different":[18],"mechanisms,":[19],"such":[20],"as":[21],"synaptic":[22,65,79,88,135,143,163,186,227],"coupling":[23,66],"and":[24,30,120,167,210,247,277],"itself":[29],"its":[31,154],"neighbors,":[32],"drive":[33],"cell's":[35],"firing":[36],"properties.":[37],"Though":[38],"this":[39,105,109,215],"widely":[42],"studied":[43],"modeling":[44,52],"problem,":[45],"there":[46],"still":[48],"room":[49],"develop":[51,196],"solutions":[53],"by":[54,111],"simplifications":[55],"embedded":[56],"previous":[58,69],"models.":[59],"The":[60,81],"first":[61],"shortcut":[62],"that":[64,84,126,179,249,272],"mechanisms":[67],"models":[70,92],"do":[71],"not":[72],"replicate":[73],"complex":[75],"dynamics":[76],"response.":[80],"second":[82],"number":[86],"connections":[89,150,164,187,276],"these":[91,149,170],"an":[94,101,197],"order":[95],"magnitude":[97],"smaller":[98],"than":[99],"actual":[102],"neuron.":[103],"In":[104],"research,":[106],"we":[107,160,172],"push":[108],"barrier":[110],"incorporating":[112,132],"more":[114],"accurate":[115],"model":[116,178,209,251],"synapse":[119],"propose":[121,173],"system":[123],"identification":[124],"solution":[125],"can":[127,253],"scale":[128],"network":[131],"hundreds":[133,141],"connections.":[136,228],"Although":[137],"neuron":[139],"has":[140],"connections,":[144],"only":[145],"subset":[147],"significantly":[151],"contributes":[152],"activity.":[156],"As":[157],"result,":[159],"assume":[161],"are":[165],"sparse,":[166],"dynamics,":[171],"Bayesian":[175],"point-process":[176],"state-space":[177],"lets":[180],"us":[181],"incorporate":[182],"sparsity":[184],"within":[188],"regularization":[190],"technique":[191],"into":[192],"our":[193,257,283],"framework.":[194],"We":[195,229,259],"extended":[198],"expectation-maximization.":[199],"algorithm":[200,267],"estimate":[202],"free":[204],"parameters":[205,223,252],"proposed":[208,266],"demonstrate":[211],"application":[213,263],"methodology":[216],"problem":[219],"estimating":[221],"many":[225],"dynamic":[226,239],"then":[230],"go":[231],"through":[232],"simulation":[234],"example":[235],"consisting":[236],"synapses":[240],"across":[241],"range":[243],"parameter":[245],"values":[246],"show":[248,261],"be":[254],"estimated":[255],"using":[256,285],"method.":[258],"also":[260],"intracellular":[270],"data":[271],"contains":[273],"96":[274],"presynaptic":[275],"assess":[278],"estimation":[280],"accuracy":[281],"method":[284],"combination":[287],"goodness-of-fit":[289],"measures.":[290]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
