{"id":"https://openalex.org/W4292283966","doi":"https://doi.org/10.1162/jocn_a_01902","title":"Beyond Drift Diffusion Models: Fitting a Broad Class of Decision and Reinforcement Learning Models with HDDM","display_name":"Beyond Drift Diffusion Models: Fitting a Broad Class of Decision and Reinforcement Learning Models with HDDM","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4292283966","doi":"https://doi.org/10.1162/jocn_a_01902","pmid":"https://pubmed.ncbi.nlm.nih.gov/35939629"},"language":"en","primary_location":{"id":"doi:10.1162/jocn_a_01902","is_oa":false,"landing_page_url":"https://doi.org/10.1162/jocn_a_01902","pdf_url":null,"source":{"id":"https://openalex.org/S123144817","display_name":"Journal of Cognitive Neuroscience","issn_l":"0898-929X","issn":["0898-929X","1530-8898"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cognitive Neuroscience","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088197719","display_name":"Alexander Fengler","orcid":"https://orcid.org/0000-0002-0104-3905"},"institutions":[{"id":"https://openalex.org/I175594653","display_name":"John Brown University","ror":"https://ror.org/02ct41q97","country_code":"US","type":"education","lineage":["https://openalex.org/I175594653"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Fengler","raw_affiliation_strings":["Brown University"],"raw_orcid":"https://orcid.org/0000-0002-0104-3905","affiliations":[{"raw_affiliation_string":"Brown University","institution_ids":["https://openalex.org/I175594653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065455779","display_name":"Krishn Bera","orcid":"https://orcid.org/0000-0002-0356-4659"},"institutions":[{"id":"https://openalex.org/I175594653","display_name":"John Brown University","ror":"https://ror.org/02ct41q97","country_code":"US","type":"education","lineage":["https://openalex.org/I175594653"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Krishn Bera","raw_affiliation_strings":["Brown University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brown University","institution_ids":["https://openalex.org/I175594653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007697168","display_name":"Mads L. Pedersen","orcid":"https://orcid.org/0000-0001-5240-7783"},"institutions":[{"id":"https://openalex.org/I175594653","display_name":"John Brown University","ror":"https://ror.org/02ct41q97","country_code":"US","type":"education","lineage":["https://openalex.org/I175594653"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO","US"],"is_corresponding":false,"raw_author_name":"Mads L. Pedersen","raw_affiliation_strings":["Brown University","University of Oslo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brown University","institution_ids":["https://openalex.org/I175594653"]},{"raw_affiliation_string":"University of Oslo","institution_ids":["https://openalex.org/I184942183"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007609257","display_name":"Michael J. Frank","orcid":"https://orcid.org/0000-0001-8451-0523"},"institutions":[{"id":"https://openalex.org/I175594653","display_name":"John Brown University","ror":"https://ror.org/02ct41q97","country_code":"US","type":"education","lineage":["https://openalex.org/I175594653"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael J. Frank","raw_affiliation_strings":["Brown University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brown University","institution_ids":["https://openalex.org/I175594653"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":8.1483,"has_fulltext":false,"cited_by_count":43,"citation_normalized_percentile":{"value":0.98542081,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"34","issue":"10","first_page":"1780","last_page":"1805"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10243","display_name":"Statistical Methods and Bayesian Inference","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10243","display_name":"Statistical Methods and Bayesian Inference","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9679999947547913,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10841","display_name":"Economic and Environmental Valuation","score":0.9652000069618225,"subfield":{"id":"https://openalex.org/subfields/2002","display_name":"Economics and Econometrics"},"field":{"id":"https://openalex.org/fields/20","display_name":"Economics, Econometrics and Finance"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6577395796775818},{"id":"https://openalex.org/keywords/reinforcement-learning","display_name":"Reinforcement learning","score":0.6250707507133484},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5982136130332947},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5928325653076172},{"id":"https://openalex.org/keywords/toolbox","display_name":"Toolbox","score":0.5765160918235779},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.5614437460899353},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5383824110031128},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.5031556487083435},{"id":"https://openalex.org/keywords/bayesian-inference","display_name":"Bayesian inference","score":0.4954766035079956},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.4343392252922058}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6577395796775818},{"id":"https://openalex.org/C97541855","wikidata":"https://www.wikidata.org/wiki/Q830687","display_name":"Reinforcement learning","level":2,"score":0.6250707507133484},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5982136130332947},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5928325653076172},{"id":"https://openalex.org/C2777655017","wikidata":"https://www.wikidata.org/wiki/Q1501161","display_name":"Toolbox","level":2,"score":0.5765160918235779},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.5614437460899353},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5383824110031128},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.5031556487083435},{"id":"https://openalex.org/C160234255","wikidata":"https://www.wikidata.org/wiki/Q812535","display_name":"Bayesian inference","level":3,"score":0.4954766035079956},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.4343392252922058},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003657","descriptor_name":"Decision Making","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003657","descriptor_name":"Decision Making","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003657","descriptor_name":"Decision Making","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012054","descriptor_name":"Reinforcement, Psychology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012054","descriptor_name":"Reinforcement, Psychology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012054","descriptor_name":"Reinforcement, Psychology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1162/jocn_a_01902","is_oa":false,"landing_page_url":"https://doi.org/10.1162/jocn_a_01902","pdf_url":null,"source":{"id":"https://openalex.org/S123144817","display_name":"Journal of Cognitive Neuroscience","issn_l":"0898-929X","issn":["0898-929X","1530-8898"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cognitive Neuroscience","raw_type":"journal-article"},{"id":"pmid:35939629","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35939629","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cognitive neuroscience","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","id":"https://metadata.un.org/sdg/16","score":0.7400000095367432}],"awards":[{"id":"https://openalex.org/G3807823402","display_name":null,"funder_award_id":"P50 MH 119467-01","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G5665001942","display_name":null,"funder_award_id":"S10 OD025181","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7191724272","display_name":null,"funder_award_id":"R01 MH084840-08A1","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":82,"referenced_works":["https://openalex.org/W32980360","https://openalex.org/W160989634","https://openalex.org/W1502641836","https://openalex.org/W1567512734","https://openalex.org/W1964227641","https://openalex.org/W1976040608","https://openalex.org/W1983818070","https://openalex.org/W1985054565","https://openalex.org/W1997628954","https://openalex.org/W1997904803","https://openalex.org/W2002781122","https://openalex.org/W2004396746","https://openalex.org/W2011265495","https://openalex.org/W2022557219","https://openalex.org/W2027728102","https://openalex.org/W2087615164","https://openalex.org/W2093223772","https://openalex.org/W2098205603","https://openalex.org/W2104266030","https://openalex.org/W2114086282","https://openalex.org/W2115971452","https://openalex.org/W2117076645","https://openalex.org/W2129905273","https://openalex.org/W2131602953","https://openalex.org/W2136582516","https://openalex.org/W2140222892","https://openalex.org/W2148534890","https://openalex.org/W2169134378","https://openalex.org/W2217402295","https://openalex.org/W2290798512","https://openalex.org/W2342249984","https://openalex.org/W2432457035","https://openalex.org/W2559655401","https://openalex.org/W2561424158","https://openalex.org/W2624492108","https://openalex.org/W2792838806","https://openalex.org/W2797452937","https://openalex.org/W2809827374","https://openalex.org/W2887847463","https://openalex.org/W2909235757","https://openalex.org/W2910719176","https://openalex.org/W2925208183","https://openalex.org/W2930108284","https://openalex.org/W2939460003","https://openalex.org/W2951121116","https://openalex.org/W2953109992","https://openalex.org/W2956525492","https://openalex.org/W2963884690","https://openalex.org/W2963977107","https://openalex.org/W2989963295","https://openalex.org/W3016539155","https://openalex.org/W3028429185","https://openalex.org/W3031106453","https://openalex.org/W3035832842","https://openalex.org/W3045274673","https://openalex.org/W3047413465","https://openalex.org/W3081344392","https://openalex.org/W3082789784","https://openalex.org/W3122858766","https://openalex.org/W3124627824","https://openalex.org/W3147590228","https://openalex.org/W3150807214","https://openalex.org/W3157094080","https://openalex.org/W3163686176","https://openalex.org/W3180691962","https://openalex.org/W3195926932","https://openalex.org/W4212774754","https://openalex.org/W4214717370","https://openalex.org/W4288350962","https://openalex.org/W4295660562","https://openalex.org/W4296211168","https://openalex.org/W4310815431","https://openalex.org/W4311150486","https://openalex.org/W6606625665","https://openalex.org/W6677459581","https://openalex.org/W6679529799","https://openalex.org/W6751496971","https://openalex.org/W6751787819","https://openalex.org/W6762796280","https://openalex.org/W6765924760","https://openalex.org/W6766978945","https://openalex.org/W6787795230"],"related_works":["https://openalex.org/W2549786917","https://openalex.org/W3204758414","https://openalex.org/W2407375987","https://openalex.org/W3049691116","https://openalex.org/W2505726097","https://openalex.org/W2010643158","https://openalex.org/W2106867672","https://openalex.org/W4310268968","https://openalex.org/W2950975704","https://openalex.org/W4297815943"],"abstract_inverted_index":{"Computational":[0],"modeling":[1],"has":[2,86,126],"become":[3],"a":[4,49,91,116,147,159,169],"central":[5],"aspect":[6],"of":[7,52,54,75,79,120,130,173],"research":[8],"in":[9,69,102,141],"the":[10,14,128,151],"cognitive":[11,38],"neurosciences.":[12],"As":[13],"field":[15],"matures,":[16],"it":[17,111],"is":[18],"increasingly":[19],"important":[20],"to":[21,26,57,63,90,114,150,199],"move":[22],"beyond":[23],"standard":[24],"models":[25,29,46,53],"quantitatively":[27],"assess":[28,168],"with":[30,132,181,204],"richer":[31],"dynamics":[32],"that":[33],"may":[34],"better":[35],"reflect":[36],"underlying":[37],"and":[39,66,157,167,175,197],"neural":[40,202],"processes.":[41],"For":[42],"example,":[43],"sequential":[44],"sampling":[45],"(SSMs)":[47],"are":[48,78,98],"general":[50],"class":[51],"decision-making":[55],"intended":[56],"capture":[58],"processes":[59],"jointly":[60],"giving":[61],"rise":[62],"RT":[64],"distributions":[65],"choice":[67,71],"data":[68,84],"n-alternative":[70],"paradigms.":[72],"A":[73],"number":[74],"model":[76,191,205],"variations":[77],"theoretical":[80],"interest,":[81],"but":[82],"empirical":[83],"analysis":[85],"historically":[87,138],"been":[88,139],"tied":[89],"small":[92],"subset":[93],"for":[94,105,161],"which":[95,136],"likelihood":[96],"functions":[97],"analytically":[99],"tractable.":[100],"Advances":[101],"methods":[103],"designed":[104],"likelihood-free":[106],"inference":[107],"have":[108],"recently":[109],"made":[110],"computationally":[112],"feasible":[113],"consider":[115],"much":[117],"larger":[118],"spectrum":[119],"SSMs.":[121],"In":[122],"addition,":[123],"recent":[124],"work":[125],"motivated":[127],"combination":[129],"SSMs":[131,174],"reinforcement":[133,182],"learning":[134,183],"models,":[135],"had":[137],"considered":[140],"separate":[142],"literatures.":[143],"Here,":[144],"we":[145],"provide":[146],"significant":[148],"addition":[149],"widely":[152],"used":[153],"HDDM":[154],"Python":[155],"toolbox":[156],"include":[158],"tutorial":[160],"how":[162,176],"users":[163],"can":[164,178],"easily":[165],"fit":[166],"(user-extensible)":[170],"wide":[171],"variety":[172],"they":[177],"be":[179],"combined":[180],"models.":[184],"The":[185],"extension":[186],"comes":[187],"batteries":[188],"included,":[189],"including":[190],"visualization":[192],"tools,":[193],"posterior":[194],"predictive":[195],"checks,":[196],"ability":[198],"link":[200],"trial-wise":[201],"signals":[203],"parameters":[206],"via":[207],"hierarchical":[208],"Bayesian":[209],"regression.":[210]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":2}],"updated_date":"2026-07-13T07:31:44.756512","created_date":"2025-10-10T00:00:00"}
