{"id":"https://openalex.org/W2128546364","doi":"https://doi.org/10.1162/106454699568791","title":"The Simulated Evolution of Biochemical Guilds: Reconciling Gaia Theory and Natural Selection","display_name":"The Simulated Evolution of Biochemical Guilds: Reconciling Gaia Theory and Natural Selection","publication_year":1999,"publication_date":"1999-10-01","ids":{"openalex":"https://openalex.org/W2128546364","doi":"https://doi.org/10.1162/106454699568791","mag":"2128546364","pmid":"https://pubmed.ncbi.nlm.nih.gov/10829084"},"language":"en","primary_location":{"id":"doi:10.1162/106454699568791","is_oa":false,"landing_page_url":"https://doi.org/10.1162/106454699568791","pdf_url":null,"source":{"id":"https://openalex.org/S2181302","display_name":"Artificial Life","issn_l":"1064-5462","issn":["1064-5462","1530-9185"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Life","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110240913","display_name":"Keith L. Downing","orcid":null},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Keith Downing","raw_affiliation_strings":["Department of Computer and Information Sciences Norwegian University of Science and Technology 7034 Trondheim, Norway"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Sciences Norwegian University of Science and Technology 7034 Trondheim, Norway","institution_ids":["https://openalex.org/I204778367"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082143492","display_name":"Peter Zvirinsky","orcid":null},"institutions":[{"id":"https://openalex.org/I183764125","display_name":"Technical University of Ko\u0161ice","ror":"https://ror.org/05xm08015","country_code":"SK","type":"education","lineage":["https://openalex.org/I183764125"]}],"countries":["SK"],"is_corresponding":false,"raw_author_name":"Peter Zvirinsky","raw_affiliation_strings":["Department of Cybernetics and Artificial Intelligence Technical University of Kosice, Slovakia, Letna 9/B 04120 Kosice, Slovak Republic"],"affiliations":[{"raw_affiliation_string":"Department of Cybernetics and Artificial Intelligence Technical University of Kosice, Slovakia, Letna 9/B 04120 Kosice, Slovak Republic","institution_ids":["https://openalex.org/I183764125"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5110240913"],"corresponding_institution_ids":["https://openalex.org/I204778367"],"apc_list":null,"apc_paid":null,"fwci":1.9104,"has_fulltext":false,"cited_by_count":91,"citation_normalized_percentile":{"value":0.84607503,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"5","issue":"4","first_page":"291","last_page":"318"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13811","display_name":"Earth Systems and Cosmic Evolution","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1902","display_name":"Atmospheric Science"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13811","display_name":"Earth Systems and Cosmic Evolution","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1902","display_name":"Atmospheric Science"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12788","display_name":"Space Science and Extraterrestrial Life","score":0.9749000072479248,"subfield":{"id":"https://openalex.org/subfields/3103","display_name":"Astronomy and Astrophysics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11520","display_name":"Advanced Thermodynamics and Statistical Mechanics","score":0.9627000093460083,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/guild","display_name":"Guild","score":0.6713054180145264},{"id":"https://openalex.org/keywords/natural-selection","display_name":"Natural selection","score":0.658230185508728},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5592124462127686},{"id":"https://openalex.org/keywords/biosphere","display_name":"Biosphere","score":0.5465129017829895},{"id":"https://openalex.org/keywords/darwinism","display_name":"Darwinism","score":0.5379816293716431},{"id":"https://openalex.org/keywords/competition","display_name":"Competition (biology)","score":0.5217122435569763},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5089952945709229},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.5076011419296265},{"id":"https://openalex.org/keywords/artificial-life","display_name":"Artificial life","score":0.49800562858581543},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.4387645423412323},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.43577301502227783},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2970350682735443},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.27505728602409363},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.2286134958267212}],"concepts":[{"id":"https://openalex.org/C61790302","wikidata":"https://www.wikidata.org/wiki/Q614424","display_name":"Guild","level":3,"score":0.6713054180145264},{"id":"https://openalex.org/C75268714","wikidata":"https://www.wikidata.org/wiki/Q43478","display_name":"Natural selection","level":3,"score":0.658230185508728},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5592124462127686},{"id":"https://openalex.org/C107218244","wikidata":"https://www.wikidata.org/wiki/Q42762","display_name":"Biosphere","level":2,"score":0.5465129017829895},{"id":"https://openalex.org/C196919123","wikidata":"https://www.wikidata.org/wiki/Q183493","display_name":"Darwinism","level":2,"score":0.5379816293716431},{"id":"https://openalex.org/C91306197","wikidata":"https://www.wikidata.org/wiki/Q45767","display_name":"Competition (biology)","level":2,"score":0.5217122435569763},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5089952945709229},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.5076011419296265},{"id":"https://openalex.org/C19273510","wikidata":"https://www.wikidata.org/wiki/Q263847","display_name":"Artificial life","level":2,"score":0.49800562858581543},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4387645423412323},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.43577301502227783},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2970350682735443},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.27505728602409363},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.2286134958267212},{"id":"https://openalex.org/C185933670","wikidata":"https://www.wikidata.org/wiki/Q52105","display_name":"Habitat","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001671","descriptor_name":"Biochemistry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001671","descriptor_name":"Biochemistry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001671","descriptor_name":"Biochemistry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004777","descriptor_name":"Environment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004777","descriptor_name":"Environment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004777","descriptor_name":"Environment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012641","descriptor_name":"Selection, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012641","descriptor_name":"Selection, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012641","descriptor_name":"Selection, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1162/106454699568791","is_oa":false,"landing_page_url":"https://doi.org/10.1162/106454699568791","pdf_url":null,"source":{"id":"https://openalex.org/S2181302","display_name":"Artificial Life","issn_l":"1064-5462","issn":["1064-5462","1530-9185"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Life","raw_type":"journal-article"},{"id":"pmid:10829084","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/10829084","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial life","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.27.9779","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.27.9779","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.ifi.ntnu.no/grupper/ai/eval/guild/guild.ps.gz","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.570.328","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.570.328","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.idi.ntnu.no/~keithd/publications/downloads/gaia1999.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Responsible consumption and production","score":0.5299999713897705,"id":"https://metadata.un.org/sdg/12"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W9045491","https://openalex.org/W63040088","https://openalex.org/W135895241","https://openalex.org/W633847929","https://openalex.org/W1489023563","https://openalex.org/W1505897394","https://openalex.org/W1516033625","https://openalex.org/W1517168738","https://openalex.org/W1541895522","https://openalex.org/W1579893055","https://openalex.org/W1601736244","https://openalex.org/W1982254235","https://openalex.org/W2022419888","https://openalex.org/W2031970520","https://openalex.org/W2041358136","https://openalex.org/W2068801777","https://openalex.org/W2079911719","https://openalex.org/W2089648359","https://openalex.org/W2102443398","https://openalex.org/W2103635072","https://openalex.org/W2105291362","https://openalex.org/W2158817788","https://openalex.org/W2334245763","https://openalex.org/W2502526258","https://openalex.org/W2606248781","https://openalex.org/W3020841357","https://openalex.org/W4231366908","https://openalex.org/W4233533279","https://openalex.org/W4236892381","https://openalex.org/W4241103349","https://openalex.org/W4247556073","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2884057146","https://openalex.org/W4294373694","https://openalex.org/W2979246945","https://openalex.org/W2552191435","https://openalex.org/W1697436391","https://openalex.org/W2419856017","https://openalex.org/W4245539037","https://openalex.org/W3023752014","https://openalex.org/W148318822","https://openalex.org/W1972164866"],"abstract_inverted_index":{"Gaia":[0,79],"theory,":[1,80],"which":[2],"states":[3],"that":[4,41,131],"organisms":[5],"both":[6],"affect":[7],"and":[8,20,57,96,120,142,156],"regulate":[9],"their":[10,45],"environment,":[11],"poses":[12],"an":[13,22,76,90],"interesting":[14],"problem":[15],"to":[16,34,64,78,108,138],"Neo-Darwinian":[17],"evolutionary":[18,67],"biologists":[19],"provides":[21],"exciting":[23],"set":[24],"of":[25,38,48,60,85,98,113,152],"phenomena":[26],"for":[27],"artificial-life":[28,91],"investigation.":[29],"The":[30],"key":[31,150],"challenge":[32],"is":[33,136],"explain":[35,139],"the":[36,55,61,111,146],"emergence":[37,87],"biotic":[39],"communities":[40],"are":[42],"capable,":[43],"via":[44],"implicit":[46],"coordination,":[47],"regulating":[49],"large-scale":[50],"biogeochemical":[51],"factors":[52],"such":[53],"as":[54],"temperature":[56],"chemical":[58],"composition":[59],"biosphere,":[62],"but":[63],"assume":[65],"no":[66],"mechanisms":[68],"beyond":[69],"contemporary":[70],"natural":[71,134],"selection.":[72],"Along":[73],"with":[74],"providing":[75],"introduction":[77],"this":[81],"article":[82],"presents":[83],"simulations":[84],"Gaian":[86,140,153],"based":[88],"on":[89],"model":[92],"involving":[93],"genetic":[94],"algorithms":[95],"guilds":[97,114],"simple":[99],"metabolizing":[100],"agents.":[101],"In":[102],"these":[103],"simulations,":[104],"resource":[105],"competition":[106],"leads":[107],"guild":[109],"diversity;":[110],"ensemble":[112],"then":[115],"manifests":[116],"life-sustaining":[117],"nutrient":[118,126],"recycling":[119,155],"exerts":[121],"distributed":[122],"control":[123],"over":[124],"environmental":[125],"ratios.":[127],"These":[128],"results":[129],"illustrate":[130],"standard":[132],"individual-based":[133],"selection":[135],"sufficient":[137],"self-organization,":[141],"they":[143],"help":[144],"clarify":[145],"relationships":[147],"between":[148],"two":[149],"metrics":[151],"activity:":[154],"regulation.":[157]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2023,"cited_by_count":20},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
