{"id":"https://openalex.org/W2123015857","doi":"https://doi.org/10.1162/089976698300017160","title":"Classification of Temporal Patterns in Dynamic Biological Networks","display_name":"Classification of Temporal Patterns in Dynamic Biological Networks","publication_year":1998,"publication_date":"1998-10-01","ids":{"openalex":"https://openalex.org/W2123015857","doi":"https://doi.org/10.1162/089976698300017160","mag":"2123015857","pmid":"https://pubmed.ncbi.nlm.nih.gov/9744900"},"language":"en","primary_location":{"id":"doi:10.1162/089976698300017160","is_oa":false,"landing_page_url":"https://doi.org/10.1162/089976698300017160","pdf_url":null,"source":{"id":"https://openalex.org/S207023548","display_name":"Neural Computation","issn_l":"0899-7667","issn":["0899-7667","1530-888X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Computation","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103469590","display_name":"Patrick D. Roberts","orcid":null},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Patrick D. Roberts","raw_affiliation_strings":["Neurological Sciences Institute, Oregon Health Sciences University, Portland, OR 97209, U.S.A"],"affiliations":[{"raw_affiliation_string":"Neurological Sciences Institute, Oregon Health Sciences University, Portland, OR 97209, U.S.A","institution_ids":["https://openalex.org/I165690674"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5103469590"],"corresponding_institution_ids":["https://openalex.org/I165690674"],"apc_list":null,"apc_paid":null,"fwci":0.9006,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.73403535,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"10","issue":"7","first_page":"1831","last_page":"1846"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12236","display_name":"Photoreceptor and optogenetics research","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.6112145185470581},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.5915338397026062},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5332581400871277},{"id":"https://openalex.org/keywords/metric-space","display_name":"Metric space","score":0.5258460640907288},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.48090529441833496},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4557984471321106},{"id":"https://openalex.org/keywords/state-space","display_name":"State space","score":0.4368303716182709},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4213360548019409},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.37050896883010864},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35906562209129333},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.13107484579086304},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.10199546813964844}],"concepts":[{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.6112145185470581},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.5915338397026062},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5332581400871277},{"id":"https://openalex.org/C198043062","wikidata":"https://www.wikidata.org/wiki/Q180953","display_name":"Metric space","level":2,"score":0.5258460640907288},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.48090529441833496},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4557984471321106},{"id":"https://openalex.org/C72434380","wikidata":"https://www.wikidata.org/wiki/Q230930","display_name":"State space","level":2,"score":0.4368303716182709},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4213360548019409},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.37050896883010864},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35906562209129333},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.13107484579086304},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.10199546813964844},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D010507","descriptor_name":"Periodicity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010507","descriptor_name":"Periodicity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010507","descriptor_name":"Periodicity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1162/089976698300017160","is_oa":false,"landing_page_url":"https://doi.org/10.1162/089976698300017160","pdf_url":null,"source":{"id":"https://openalex.org/S207023548","display_name":"Neural Computation","issn_l":"0899-7667","issn":["0899-7667","1530-888X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315718","host_organization_name":"The MIT Press","host_organization_lineage":["https://openalex.org/P4310315718"],"host_organization_lineage_names":["The MIT Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Computation","raw_type":"journal-article"},{"id":"pmid:9744900","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/9744900","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural computation","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W22297218","https://openalex.org/W216543987","https://openalex.org/W284492748","https://openalex.org/W1565611252","https://openalex.org/W1572982068","https://openalex.org/W1573681974","https://openalex.org/W1743082908","https://openalex.org/W1985940938","https://openalex.org/W1991985107","https://openalex.org/W1995341919","https://openalex.org/W1998607906","https://openalex.org/W2001616149","https://openalex.org/W2021514745","https://openalex.org/W2048250166","https://openalex.org/W2052898976","https://openalex.org/W2056313562","https://openalex.org/W2063264662","https://openalex.org/W2064108635","https://openalex.org/W2066365486","https://openalex.org/W2079173805","https://openalex.org/W2082345008","https://openalex.org/W2089063595","https://openalex.org/W2092324494","https://openalex.org/W2093485175","https://openalex.org/W2098186057","https://openalex.org/W2105291362","https://openalex.org/W2130586999","https://openalex.org/W2413843608","https://openalex.org/W2728092349","https://openalex.org/W2974116768","https://openalex.org/W4240942759"],"related_works":["https://openalex.org/W3128853513","https://openalex.org/W2959160600","https://openalex.org/W2914622179","https://openalex.org/W4385510321","https://openalex.org/W4324301570","https://openalex.org/W2119956050","https://openalex.org/W2142113611","https://openalex.org/W2056065776","https://openalex.org/W2045629210","https://openalex.org/W4297851895"],"abstract_inverted_index":{"A":[0],"general":[1],"method":[2,23],"is":[3,24],"presented":[4],"to":[5,67],"classify":[6],"temporal":[7],"patterns":[8],"generated":[9,45],"by":[10,46],"rhythmic":[11],"biological":[12,78],"networks":[13],"when":[14],"synaptic":[15],"connections":[16],"and":[17,28,36,77],"cellular":[18],"properties":[19,32],"are":[20,49,63,75,80],"known.":[21],"The":[22,61],"discrete":[25],"in":[26,70],"nature":[27],"relies":[29],"on":[30],"algebraic":[31],"of":[33,40,43],"state":[34],"transitions":[35],"graph":[37],"theory.":[38],"Elements":[39],"the":[41,56],"set":[42],"rhythms":[44,62],"a":[47,52,71],"network":[48],"compared":[50],"using":[51],"metric":[53,72],"that":[54],"quantifies":[55],"functional":[57],"differences":[58],"among":[59],"them.":[60],"then":[64],"classified":[65],"according":[66],"their":[68],"location":[69],"space.":[73],"Examples":[74],"given,":[76],"implications":[79],"discussed.":[81]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}