{"id":"https://openalex.org/W3119632172","doi":"https://doi.org/10.1155/2021/6664362","title":"iBLP: An XGBoost-Based Predictor for Identifying Bioluminescent Proteins","display_name":"iBLP: An XGBoost-Based Predictor for Identifying Bioluminescent Proteins","publication_year":2021,"publication_date":"2021-01-07","ids":{"openalex":"https://openalex.org/W3119632172","doi":"https://doi.org/10.1155/2021/6664362","mag":"3119632172","pmid":"https://pubmed.ncbi.nlm.nih.gov/33505515"},"language":"en","primary_location":{"id":"doi:10.1155/2021/6664362","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/6664362","pdf_url":"https://downloads.hindawi.com/journals/cmmm/2021/6664362.pdf","source":{"id":"https://openalex.org/S36980176","display_name":"Computational and Mathematical Methods in Medicine","issn_l":"1748-670X","issn":["1748-670X","1748-6718"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational and Mathematical Methods in Medicine","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://downloads.hindawi.com/journals/cmmm/2021/6664362.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100456008","display_name":"Dan Zhang","orcid":"https://orcid.org/0000-0002-0520-7655"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dan Zhang","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China"],"raw_orcid":"https://orcid.org/0000-0002-0520-7655","affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083807808","display_name":"Hua-Dong Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hua-Dong Chen","raw_affiliation_strings":["Key Laboratory of Medical Bioinformatics, Key Laboratory of Ministry of Education for Gastrointestinal Cancer, School of Basic Medical Sciences, Fujian Medical University, Fuzhou 350001, China"],"raw_orcid":"https://orcid.org/0000-0002-0824-2544","affiliations":[{"raw_affiliation_string":"Key Laboratory of Medical Bioinformatics, Key Laboratory of Ministry of Education for Gastrointestinal Cancer, School of Basic Medical Sciences, Fujian Medical University, Fuzhou 350001, China","institution_ids":["https://openalex.org/I129708740"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026505260","display_name":"Hasan Zulfiqar","orcid":"https://orcid.org/0000-0002-8526-371X"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hasan Zulfiqar","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China"],"raw_orcid":"https://orcid.org/0000-0002-8526-371X","affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045779253","display_name":"Shi-Shi Yuan","orcid":"https://orcid.org/0000-0003-3068-8849"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shi-Shi Yuan","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China"],"raw_orcid":"https://orcid.org/0000-0003-3068-8849","affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085304454","display_name":"Qin-Lai Huang","orcid":"https://orcid.org/0000-0002-2654-8731"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qin-Lai Huang","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China"],"raw_orcid":"https://orcid.org/0000-0002-2654-8731","affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073409235","display_name":"Zhao\u2010Yue Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhao-Yue Zhang","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China"],"raw_orcid":"https://orcid.org/0000-0002-4619-247X","affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021812514","display_name":"Kejun Deng","orcid":"https://orcid.org/0000-0003-0411-549X"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ke-Jun Deng","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China"],"raw_orcid":"https://orcid.org/0000-0003-0411-549X","affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5021812514","https://openalex.org/A5073409235"],"corresponding_institution_ids":["https://openalex.org/I150229711"],"apc_list":{"value":2100,"currency":"USD","value_usd":2100},"apc_paid":{"value":2100,"currency":"USD","value_usd":2100},"fwci":6.1072,"has_fulltext":true,"cited_by_count":82,"citation_normalized_percentile":{"value":0.97571175,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"2021","issue":null,"first_page":"1","last_page":"15"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12561","display_name":"bioluminescence and chemiluminescence research","score":0.9858999848365784,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.5621811747550964},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.523956298828125},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5031227469444275},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4847523868083954},{"id":"https://openalex.org/keywords/bioluminescence","display_name":"Bioluminescence","score":0.4660322070121765},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.43882840871810913},{"id":"https://openalex.org/keywords/photobacterium-phosphoreum","display_name":"Photobacterium phosphoreum","score":0.42930692434310913},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4169774651527405},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3736954629421234},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3329737186431885},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17540740966796875},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.10445272922515869},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.08356529474258423},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08311194181442261}],"concepts":[{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.5621811747550964},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.523956298828125},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5031227469444275},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4847523868083954},{"id":"https://openalex.org/C5176359","wikidata":"https://www.wikidata.org/wiki/Q179924","display_name":"Bioluminescence","level":2,"score":0.4660322070121765},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.43882840871810913},{"id":"https://openalex.org/C2779925203","wikidata":"https://www.wikidata.org/wiki/Q7187716","display_name":"Photobacterium phosphoreum","level":3,"score":0.42930692434310913},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4169774651527405},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3736954629421234},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3329737186431885},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17540740966796875},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.10445272922515869},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.08356529474258423},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08311194181442261}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049449","descriptor_name":"Luminescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049449","descriptor_name":"Luminescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049449","descriptor_name":"Luminescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055598","descriptor_name":"Chemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055598","descriptor_name":"Chemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055598","descriptor_name":"Chemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1155/2021/6664362","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/6664362","pdf_url":"https://downloads.hindawi.com/journals/cmmm/2021/6664362.pdf","source":{"id":"https://openalex.org/S36980176","display_name":"Computational and Mathematical Methods in Medicine","issn_l":"1748-670X","issn":["1748-670X","1748-6718"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational and Mathematical Methods in Medicine","raw_type":"journal-article"},{"id":"pmid:33505515","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33505515","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational and mathematical methods in medicine","raw_type":null},{"id":"pmh:oai:doaj.org/article:c0756df79fc84fb2870040a4d98d0291","is_oa":false,"landing_page_url":"https://doaj.org/article/c0756df79fc84fb2870040a4d98d0291","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Computational and Mathematical Methods in Medicine, Vol 2021 (2021)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:6740021","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC7808816","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:7808816","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7808816","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Comput Math Methods Med","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1155/2021/6664362","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/6664362","pdf_url":"https://downloads.hindawi.com/journals/cmmm/2021/6664362.pdf","source":{"id":"https://openalex.org/S36980176","display_name":"Computational and Mathematical Methods in Medicine","issn_l":"1748-670X","issn":["1748-670X","1748-6718"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational and Mathematical Methods in Medicine","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6498967737","display_name":null,"funder_award_id":"81872957","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3119632172.pdf","grobid_xml":"https://content.openalex.org/works/W3119632172.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W1518873647","https://openalex.org/W2001484619","https://openalex.org/W2002573639","https://openalex.org/W2010688739","https://openalex.org/W2029499676","https://openalex.org/W2047672715","https://openalex.org/W2048032284","https://openalex.org/W2056366317","https://openalex.org/W2057786676","https://openalex.org/W2058436782","https://openalex.org/W2077200345","https://openalex.org/W2081447201","https://openalex.org/W2111173790","https://openalex.org/W2114358087","https://openalex.org/W2129448726","https://openalex.org/W2135893370","https://openalex.org/W2145957695","https://openalex.org/W2149870286","https://openalex.org/W2152923973","https://openalex.org/W2153030642","https://openalex.org/W2156125289","https://openalex.org/W2158714788","https://openalex.org/W2164260969","https://openalex.org/W2167441795","https://openalex.org/W2167883296","https://openalex.org/W2171393437","https://openalex.org/W2254740876","https://openalex.org/W2295598076","https://openalex.org/W2300418237","https://openalex.org/W2326196270","https://openalex.org/W2472502719","https://openalex.org/W2508362099","https://openalex.org/W2508405377","https://openalex.org/W2526763554","https://openalex.org/W2534729597","https://openalex.org/W2573403814","https://openalex.org/W2614956010","https://openalex.org/W2622974956","https://openalex.org/W2739999456","https://openalex.org/W2750245257","https://openalex.org/W2759124302","https://openalex.org/W2793168264","https://openalex.org/W2805110914","https://openalex.org/W2884152064","https://openalex.org/W2885091354","https://openalex.org/W2891493392","https://openalex.org/W2895604447","https://openalex.org/W2898355747","https://openalex.org/W2901596277","https://openalex.org/W2901754076","https://openalex.org/W2905837927","https://openalex.org/W2923490814","https://openalex.org/W2942801317","https://openalex.org/W2947856732","https://openalex.org/W2953267417","https://openalex.org/W2963614249","https://openalex.org/W2965901104","https://openalex.org/W2967387109","https://openalex.org/W2979058573","https://openalex.org/W2981792167","https://openalex.org/W2988121666","https://openalex.org/W3003008175","https://openalex.org/W3032843171","https://openalex.org/W3047705148","https://openalex.org/W3084754935","https://openalex.org/W3102476541","https://openalex.org/W4249406446"],"related_works":["https://openalex.org/W2516550247","https://openalex.org/W2053368216","https://openalex.org/W4247342740","https://openalex.org/W1971817920","https://openalex.org/W2113027595","https://openalex.org/W2920225696","https://openalex.org/W2012291437","https://openalex.org/W4245647525","https://openalex.org/W2050870099","https://openalex.org/W2137054261"],"abstract_inverted_index":{"Bioluminescent":[0],"proteins":[1,7,58],"(BLPs)":[2],"are":[3,200],"a":[4,86,147],"class":[5],"of":[6,18,38,56,77,81,128,159],"that":[8,178],"widely":[9],"distributed":[10],"in":[11,33],"many":[12],"living":[13],"organisms":[14],"with":[15,172],"various":[16,34],"mechanisms":[17],"light":[19],"emission":[20],"including":[21],"bioluminescence":[22],"and":[23,50,83,100,115,133,168,184,194],"chemiluminescence":[24],"from":[25,112],"luminous":[26],"organisms.":[27],"Bioluminescence":[28],"has":[29,161],"been":[30,162],"commonly":[31],"used":[32],"analytical":[35],"research":[36],"methods":[37,132],"cellular":[39,48],"processes,":[40],"such":[41],"as":[42,61,136,138],"gene":[43],"expression":[44],"analysis,":[45],"drug":[46],"discovery,":[47],"imaging,":[49],"toxicity":[51],"determination.":[52],"However,":[53],"the":[54,75,78,106,126,144,179],"identification":[55,80,199],"bioluminescent":[57],"is":[59,182],"challenging":[60],"they":[62],"share":[63],"poor":[64],"sequence":[65],"similarities":[66],"among":[67],"them.":[68],"In":[69],"this":[70],"paper,":[71],"we":[72,108,124],"briefly":[73],"reviewed":[74],"development":[76],"computational":[79],"BLPs":[82,92],"subsequently":[84],"proposed":[85,180],"novel":[87,148],"predicting":[88],"framework":[89],"for":[90,118,189,197],"identifying":[91],"based":[93,142],"on":[94,143,166],"eXtreme":[95],"gradient":[96],"boosting":[97],"algorithm":[98],"(XGBoost)":[99],"using":[101],"sequence-derived":[102],"features.":[103],"To":[104],"train":[105],"models,":[107,123],"collected":[109],"BLP":[110,190,198],"data":[111],"bacteria,":[113],"eukaryote,":[114],"archaea.":[116],"Then,":[117],"getting":[119],"more":[120],"effective":[121],"prediction":[122],"examined":[125],"performances":[127],"different":[129],"feature":[130],"extraction":[131],"their":[134],"combinations":[135],"well":[137],"classification":[139],"algorithms.":[140],"Finally,":[141],"optimal":[145],"model,":[146],"predictor":[149],"named":[150],"iBLP":[151,160],"was":[152],"constructed":[153],"to":[154],"identify":[155],"BLPs.":[156],"The":[157,192],"robustness":[158],"proved":[163],"by":[164],"experiments":[165],"training":[167],"independent":[169],"datasets.":[170],"Comparison":[171],"other":[173],"published":[174],"method":[175,181],"further":[176],"demonstrated":[177],"powerful":[183],"could":[185],"provide":[186],"good":[187],"performance":[188],"identification.":[191],"webserver":[193],"software":[195],"package":[196],"freely":[201],"available":[202],"at":[203],"http://lin-group.cn/server/iBLP.":[204]},"counts_by_year":[{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":33},{"year":2021,"cited_by_count":24}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
