{"id":"https://openalex.org/W3136657289","doi":"https://doi.org/10.1155/2021/6633213","title":"ABioNER: A BERT\u2010Based Model for Arabic Biomedical Named\u2010Entity Recognition","display_name":"ABioNER: A BERT\u2010Based Model for Arabic Biomedical Named\u2010Entity Recognition","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3136657289","doi":"https://doi.org/10.1155/2021/6633213","mag":"3136657289"},"language":"en","primary_location":{"id":"doi:10.1155/2021/6633213","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/6633213","pdf_url":"https://downloads.hindawi.com/journals/complexity/2021/6633213.pdf","source":{"id":"https://openalex.org/S207319443","display_name":"Complexity","issn_l":"1076-2787","issn":["1076-2787","1099-0526"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complexity","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://downloads.hindawi.com/journals/complexity/2021/6633213.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048521716","display_name":"Nada Boudjellal","orcid":"https://orcid.org/0000-0002-0420-6511"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Nada Boudjellal","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China"],"raw_orcid":"https://orcid.org/0000-0002-0420-6511","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084300721","display_name":"Huaping Zhang","orcid":"https://orcid.org/0000-0002-0137-4069"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Huaping Zhang","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China"],"raw_orcid":"https://orcid.org/0000-0002-0137-4069","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005807085","display_name":"Asif Khan","orcid":"https://orcid.org/0000-0002-5863-8467"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Asif Khan","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China"],"raw_orcid":"https://orcid.org/0000-0002-5863-8467","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066501193","display_name":"Arshad Ahmad","orcid":"https://orcid.org/0000-0002-3576-8365"},"institutions":[{"id":"https://openalex.org/I134276161","display_name":"Pakistan Institute of Engineering and Applied Sciences","ror":"https://ror.org/04d4mbk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I134276161"]},{"id":"https://openalex.org/I4391767994","display_name":"Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology","ror":"https://ror.org/05pgqgb54","country_code":"PK","type":"education","lineage":["https://openalex.org/I4391767994"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Arshad Ahmad","raw_affiliation_strings":["Department of IT and Computer Science, Pak-Austria Fachhochschule: Institute of Applied Sciences & Technology, Haripur, Pakistan"],"raw_orcid":"https://orcid.org/0000-0002-3576-8365","affiliations":[{"raw_affiliation_string":"Department of IT and Computer Science, Pak-Austria Fachhochschule: Institute of Applied Sciences & Technology, Haripur, Pakistan","institution_ids":["https://openalex.org/I134276161","https://openalex.org/I4391767994"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063059703","display_name":"Rashid Naseem","orcid":"https://orcid.org/0000-0002-4952-8100"},"institutions":[{"id":"https://openalex.org/I134276161","display_name":"Pakistan Institute of Engineering and Applied Sciences","ror":"https://ror.org/04d4mbk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I134276161"]},{"id":"https://openalex.org/I4391767994","display_name":"Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology","ror":"https://ror.org/05pgqgb54","country_code":"PK","type":"education","lineage":["https://openalex.org/I4391767994"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Rashid Naseem","raw_affiliation_strings":["Department of IT and Computer Science, Pak-Austria Fachhochschule: Institute of Applied Sciences & Technology, Haripur, Pakistan"],"raw_orcid":"https://orcid.org/0000-0002-4952-8100","affiliations":[{"raw_affiliation_string":"Department of IT and Computer Science, Pak-Austria Fachhochschule: Institute of Applied Sciences & Technology, Haripur, Pakistan","institution_ids":["https://openalex.org/I134276161","https://openalex.org/I4391767994"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112000590","display_name":"Jianyun Shang","orcid":null},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianyun Shang","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5106181602","display_name":"Lin Dai","orcid":"https://orcid.org/0000-0002-0093-137X"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Dai","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China","institution_ids":["https://openalex.org/I125839683"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5084300721"],"corresponding_institution_ids":["https://openalex.org/I125839683"],"apc_list":{"value":2300,"currency":"USD","value_usd":2300},"apc_paid":{"value":2300,"currency":"USD","value_usd":2300},"fwci":5.8769,"has_fulltext":true,"cited_by_count":54,"citation_normalized_percentile":{"value":0.96714428,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"2021","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8564643263816833},{"id":"https://openalex.org/keywords/arabic","display_name":"Arabic","score":0.7747504711151123},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.7691996097564697},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6798559427261353},{"id":"https://openalex.org/keywords/language-model","display_name":"Language model","score":0.6357216835021973},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6170282363891602},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.6024012565612793},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5179292559623718},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4735923111438751},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.4523119628429413},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.432123064994812},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.38005247712135315},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.14615705609321594}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8564643263816833},{"id":"https://openalex.org/C96455323","wikidata":"https://www.wikidata.org/wiki/Q13955","display_name":"Arabic","level":2,"score":0.7747504711151123},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.7691996097564697},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6798559427261353},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.6357216835021973},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6170282363891602},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.6024012565612793},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5179292559623718},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4735923111438751},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4523119628429413},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.432123064994812},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.38005247712135315},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.14615705609321594},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1155/2021/6633213","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/6633213","pdf_url":"https://downloads.hindawi.com/journals/complexity/2021/6633213.pdf","source":{"id":"https://openalex.org/S207319443","display_name":"Complexity","issn_l":"1076-2787","issn":["1076-2787","1099-0526"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complexity","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:hin:complx:6633213","is_oa":false,"landing_page_url":"http://downloads.hindawi.com/journals/complexity/2021/6633213.xml","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:0e21feb03b784535bc9732d9fc69d248","is_oa":true,"landing_page_url":"https://doaj.org/article/0e21feb03b784535bc9732d9fc69d248","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Complexity, Vol 2021 (2021)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1155/2021/6633213","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/6633213","pdf_url":"https://downloads.hindawi.com/journals/complexity/2021/6633213.pdf","source":{"id":"https://openalex.org/S207319443","display_name":"Complexity","issn_l":"1076-2787","issn":["1076-2787","1099-0526"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complexity","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6600000262260437,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G5192159626","display_name":null,"funder_award_id":"4212026","funder_id":"https://openalex.org/F4320334977","funder_display_name":"Beijing Municipal Natural Science Foundation"},{"id":"https://openalex.org/G5793949614","display_name":"\u8bed\u4e49\u4e3b\u9898\u4e0e\u793e\u4ea4\u5173\u7cfb\u878d\u5408\u7684\u7279\u5b9a\u7fa4\u4f53\u53d1\u73b0\u5173\u952e\u6280\u672f\u7814\u7a76","funder_award_id":"61772075","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6626978891","display_name":null,"funder_award_id":"2018YFC0832304","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320334977","display_name":"Beijing Municipal Natural Science Foundation","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3136657289.pdf","grobid_xml":"https://content.openalex.org/works/W3136657289.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1153356764","https://openalex.org/W2101553882","https://openalex.org/W2116489716","https://openalex.org/W2117479478","https://openalex.org/W2123556395","https://openalex.org/W2345474875","https://openalex.org/W2405861896","https://openalex.org/W2520156704","https://openalex.org/W2606919896","https://openalex.org/W2769387903","https://openalex.org/W2777949341","https://openalex.org/W2779457220","https://openalex.org/W2911489562","https://openalex.org/W2949176808","https://openalex.org/W2993873509","https://openalex.org/W2995950854","https://openalex.org/W3036783970","https://openalex.org/W3091993247"],"related_works":["https://openalex.org/W2334378031","https://openalex.org/W4387517132","https://openalex.org/W2916255597","https://openalex.org/W2983934248","https://openalex.org/W1605730749","https://openalex.org/W3091569222","https://openalex.org/W4241018868","https://openalex.org/W2999302224","https://openalex.org/W1495833002","https://openalex.org/W2075635421"],"abstract_inverted_index":{"The":[0,122],"web":[1],"is":[2,30,51],"being":[3],"loaded":[4],"daily":[5],"with":[6,108,127,142],"a":[7,31,45,79,104,109],"huge":[8],"volume":[9],"of":[10,55,74,102,118],"data,":[11,15],"mainly":[12],"unstructured":[13],"textual":[14],"which":[16],"increases":[17],"the":[18,56,64,88,100,115],"need":[19],"for":[20],"information":[21],"extraction":[22],"and":[23,39,42,94,133,137],"NLP":[24],"systems":[25],"significantly.":[26],"Named\u2010entity":[27],"recognition":[28],"task":[29],"key":[32],"step":[33],"towards":[34],"efficiently":[35],"understanding":[36,117],"text":[37,90],"data":[38,91],"saving":[40],"time":[41],"effort.":[43],"Being":[44],"widely":[46],"used":[47],"language":[48],"globally,":[49],"English":[50],"taking":[52],"over":[53],"most":[54],"research":[57],"conducted":[58],"in":[59,63,87],"this":[60],"field,":[61],"especially":[62],"biomedical":[65,84,111,120],"domain.":[66],"Unlike":[67],"other":[68],"languages,":[69],"Arabic":[70,89,119],"suffers":[71],"from":[72],"lack":[73],"resources.":[75],"This":[76],"work":[77],"presents":[78],"BERT\u2010based":[80],"model":[81,107,116,123],"to":[82],"identify":[83],"named":[85,96],"entities":[86],"(specifically":[92],"disease":[93],"treatment":[95],"entities)":[97],"that":[98],"investigates":[99],"effectiveness":[101],"pretraining":[103],"monolingual":[105],"BERT":[106,135],"small\u2010scale":[110],"dataset":[112],"on":[113],"enhancing":[114],"text.":[121],"performance":[124],"was":[125],"compared":[126],"two":[128],"state\u2010of\u2010the\u2010art":[129],"models":[130,141],"(namely,":[131],"AraBERT":[132],"multilingual":[134],"cased),":[136],"it":[138],"outperformed":[139],"both":[140],"85%":[143],"F1\u2010score.":[144]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":6}],"updated_date":"2026-06-06T09:05:17.133730","created_date":"2025-10-10T00:00:00"}
