{"id":"https://openalex.org/W3137236530","doi":"https://doi.org/10.1155/2021/5529202","title":"Deep Neural Network for Somatic Mutation Classification","display_name":"Deep Neural Network for Somatic Mutation Classification","publication_year":2021,"publication_date":"2021-03-19","ids":{"openalex":"https://openalex.org/W3137236530","doi":"https://doi.org/10.1155/2021/5529202","mag":"3137236530"},"language":"en","primary_location":{"id":"doi:10.1155/2021/5529202","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/5529202","pdf_url":"https://downloads.hindawi.com/journals/sp/2021/5529202.pdf","source":{"id":"https://openalex.org/S166774750","display_name":"Scientific Programming","issn_l":"1058-9244","issn":["1058-9244","1875-919X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Programming","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://downloads.hindawi.com/journals/sp/2021/5529202.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100386395","display_name":"Haifeng Wang","orcid":"https://orcid.org/0000-0002-0783-8397"},"institutions":[{"id":"https://openalex.org/I4210159676","display_name":"Zaozhuang University","ror":"https://ror.org/05x21tp94","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210159676"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haifeng Wang","raw_affiliation_strings":["School of Information Science and Engineering, Zaozhuang University, Zaozhuang 277160, China"],"raw_orcid":"https://orcid.org/0000-0002-0783-8397","affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Zaozhuang University, Zaozhuang 277160, China","institution_ids":["https://openalex.org/I4210159676"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023190323","display_name":"Chengche Wang","orcid":"https://orcid.org/0000-0001-9848-6245"},"institutions":[{"id":"https://openalex.org/I917184967","display_name":"Bank of China","ror":"https://ror.org/02mt4s337","country_code":"CN","type":"other","lineage":["https://openalex.org/I917184967"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chengche Wang","raw_affiliation_strings":["Bank of China Zhejiang Branch, Hangzhou, ZheJiang 310003, China"],"raw_orcid":"https://orcid.org/0000-0001-9848-6245","affiliations":[{"raw_affiliation_string":"Bank of China Zhejiang Branch, Hangzhou, ZheJiang 310003, China","institution_ids":["https://openalex.org/I917184967"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061292482","display_name":"Hongchun Qu","orcid":"https://orcid.org/0000-0001-7623-2383"},"institutions":[{"id":"https://openalex.org/I4210159676","display_name":"Zaozhuang University","ror":"https://ror.org/05x21tp94","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210159676"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hongchun Qu","raw_affiliation_strings":["School of Information Science and Engineering, Zaozhuang University, Zaozhuang 277160, China"],"raw_orcid":"https://orcid.org/0000-0001-7623-2383","affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Zaozhuang University, Zaozhuang 277160, China","institution_ids":["https://openalex.org/I4210159676"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5023190323","https://openalex.org/A5061292482"],"corresponding_institution_ids":["https://openalex.org/I4210159676","https://openalex.org/I917184967"],"apc_list":{"value":1800,"currency":"USD","value_usd":1800},"apc_paid":{"value":1800,"currency":"USD","value_usd":1800},"fwci":0.0875,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.36368,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"2021","issue":null,"first_page":"1","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/somatic-cell","display_name":"Somatic cell","score":0.638049840927124},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.6175838112831116},{"id":"https://openalex.org/keywords/germline-mutation","display_name":"Germline mutation","score":0.5728235840797424},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5631151795387268},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5323648452758789},{"id":"https://openalex.org/keywords/boosting","display_name":"Boosting (machine learning)","score":0.5167852640151978},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.4934145510196686},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.4360138475894928},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4240246117115021},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3714064657688141},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.35535556077957153},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.31136080622673035},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2073255181312561},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1375122368335724}],"concepts":[{"id":"https://openalex.org/C134305767","wikidata":"https://www.wikidata.org/wiki/Q725508","display_name":"Somatic cell","level":3,"score":0.638049840927124},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.6175838112831116},{"id":"https://openalex.org/C13514818","wikidata":"https://www.wikidata.org/wiki/Q5552256","display_name":"Germline mutation","level":4,"score":0.5728235840797424},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5631151795387268},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5323648452758789},{"id":"https://openalex.org/C46686674","wikidata":"https://www.wikidata.org/wiki/Q466303","display_name":"Boosting (machine learning)","level":2,"score":0.5167852640151978},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.4934145510196686},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.4360138475894928},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4240246117115021},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3714064657688141},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35535556077957153},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.31136080622673035},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2073255181312561},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1375122368335724}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1155/2021/5529202","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/5529202","pdf_url":"https://downloads.hindawi.com/journals/sp/2021/5529202.pdf","source":{"id":"https://openalex.org/S166774750","display_name":"Scientific Programming","issn_l":"1058-9244","issn":["1058-9244","1875-919X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Programming","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:1907e7ad9e5449e49e1427034bfaa698","is_oa":true,"landing_page_url":"https://doaj.org/article/1907e7ad9e5449e49e1427034bfaa698","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scientific Programming, Vol 2021 (2021)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1155/2021/5529202","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2021/5529202","pdf_url":"https://downloads.hindawi.com/journals/sp/2021/5529202.pdf","source":{"id":"https://openalex.org/S166774750","display_name":"Scientific Programming","issn_l":"1058-9244","issn":["1058-9244","1875-919X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Programming","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.7300000190734863,"display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3137236530.pdf","grobid_xml":"https://content.openalex.org/works/W3137236530.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W273955616","https://openalex.org/W1501631032","https://openalex.org/W1590169480","https://openalex.org/W1964229346","https://openalex.org/W1967859470","https://openalex.org/W1976940944","https://openalex.org/W1980747561","https://openalex.org/W1981552604","https://openalex.org/W1989840284","https://openalex.org/W1996031526","https://openalex.org/W1998347125","https://openalex.org/W2018550894","https://openalex.org/W2027547425","https://openalex.org/W2042316019","https://openalex.org/W2064676287","https://openalex.org/W2065342948","https://openalex.org/W2101019506","https://openalex.org/W2107233609","https://openalex.org/W2112005039","https://openalex.org/W2128073546","https://openalex.org/W2138155367","https://openalex.org/W2139212933","https://openalex.org/W2143426320","https://openalex.org/W2164631357","https://openalex.org/W2284028395","https://openalex.org/W2332088574","https://openalex.org/W2343204383","https://openalex.org/W2521877993","https://openalex.org/W2530011855","https://openalex.org/W2553349038","https://openalex.org/W2759742634","https://openalex.org/W2769712341","https://openalex.org/W2810260024","https://openalex.org/W2887469830","https://openalex.org/W2907390641","https://openalex.org/W2935945599","https://openalex.org/W2943683582","https://openalex.org/W2948234356","https://openalex.org/W2952925915","https://openalex.org/W2964304355","https://openalex.org/W3011554441","https://openalex.org/W3104887532","https://openalex.org/W6610017368"],"related_works":["https://openalex.org/W2073883415","https://openalex.org/W4296060409","https://openalex.org/W3111064715","https://openalex.org/W2623784472","https://openalex.org/W1972248466","https://openalex.org/W2041452721","https://openalex.org/W824391999","https://openalex.org/W2065180810","https://openalex.org/W2940468410","https://openalex.org/W2054270613"],"abstract_inverted_index":{"The":[0,115],"detection":[1,111,116],"and":[2,16,27,78,89,139],"characterization":[3],"of":[4,18,113,128],"somatic":[5,40,61,95,109],"mutations":[6,41,62],"have":[7],"become":[8],"the":[9,14,44,64,69,108,123,131],"important":[10],"means":[11],"to":[12,24,38,59,86,106],"analyze":[13],"occurrence":[15],"development":[17],"cancer":[19,32],"and,":[20],"ultimately,":[21],"will":[22],"help":[23],"select":[25],"effective":[26],"precise":[28],"treatment":[29],"for":[30],"specific":[31],"patients.":[33],"It":[34],"is":[35,57],"very":[36],"difficult":[37],"detect":[39,60],"accurately":[42],"from":[43,63,99],"massive":[45],"sequencing":[46,65],"data.":[47,66],"In":[48,67],"this":[49],"paper,":[50],"a":[51],"forest-graph-embedded":[52],"deep":[53,80],"feed-forward":[54,81],"network":[55,82],"(forgeNet)":[56],"utilized":[58,85,105],"forgeNet,":[68],"random":[70,140],"forest":[71],"(RF)":[72],"or":[73],"Gradient":[74],"Boosting":[75],"Machine":[76],"(GBM)":[77],"graph-embedded":[79],"(GEDFN)":[83],"are":[84,104],"extract":[87],"features":[88],"implement":[90],"classification,":[91],"respectively.":[92],"Three":[93],"real":[94],"mutation":[96,110],"datasets":[97],"collected":[98],"48":[100],"triple-negative":[101],"breast":[102],"cancers":[103],"test":[107],"performances":[112],"forgeNet.":[114],"results":[117],"show":[118],"that":[119],"forgeNet":[120],"could":[121],"make":[122],"0.05%\u20130.424%":[124],"improvements":[125],"in":[126],"terms":[127],"area":[129],"under":[130],"curve":[132],"(AUC)":[133],"compared":[134],"with":[135],"support":[136],"vector":[137],"machines":[138],"forest.":[141]},"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
