{"id":"https://openalex.org/W2959019559","doi":"https://doi.org/10.1155/2019/1603867","title":"LipoFNT: Lipoylation Sites Identification with Flexible Neural Tree","display_name":"LipoFNT: Lipoylation Sites Identification with Flexible Neural Tree","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2959019559","doi":"https://doi.org/10.1155/2019/1603867","mag":"2959019559"},"language":"en","primary_location":{"id":"doi:10.1155/2019/1603867","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2019/1603867","pdf_url":"https://downloads.hindawi.com/journals/complexity/2019/1603867.pdf","source":{"id":"https://openalex.org/S207319443","display_name":"Complexity","issn_l":"1076-2787","issn":["1076-2787","1099-0526"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complexity","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://downloads.hindawi.com/journals/complexity/2019/1603867.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030950144","display_name":"Wenzheng Bao","orcid":"https://orcid.org/0000-0002-1471-5432"},"institutions":[{"id":"https://openalex.org/I124841900","display_name":"Xuzhou University of Technology","ror":"https://ror.org/02315by94","country_code":"CN","type":"education","lineage":["https://openalex.org/I124841900"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenzheng Bao","raw_affiliation_strings":["School of Information and Electrical Engineering, Xuzhou University of Technology, Xuzhou 221018"],"raw_orcid":"https://orcid.org/0000-0002-1471-5432","affiliations":[{"raw_affiliation_string":"School of Information and Electrical Engineering, Xuzhou University of Technology, Xuzhou 221018","institution_ids":["https://openalex.org/I124841900"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007584947","display_name":"Bin Yang","orcid":"https://orcid.org/0000-0001-6879-7069"},"institutions":[{"id":"https://openalex.org/I4210159676","display_name":"Zaozhuang University","ror":"https://ror.org/05x21tp94","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210159676"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bin Yang","raw_affiliation_strings":["School of Information Science and Engineering, Zaozhuang University, Zaozhuang 277160"],"raw_orcid":"https://orcid.org/0000-0001-6879-7069","affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Zaozhuang University, Zaozhuang 277160","institution_ids":["https://openalex.org/I4210159676"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100615025","display_name":"Rong Bao","orcid":"https://orcid.org/0000-0003-4762-2862"},"institutions":[{"id":"https://openalex.org/I124841900","display_name":"Xuzhou University of Technology","ror":"https://ror.org/02315by94","country_code":"CN","type":"education","lineage":["https://openalex.org/I124841900"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rong Bao","raw_affiliation_strings":["School of Information and Electrical Engineering, Xuzhou University of Technology, Xuzhou 221018"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information and Electrical Engineering, Xuzhou University of Technology, Xuzhou 221018","institution_ids":["https://openalex.org/I124841900"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036479222","display_name":"Yuehui Chen","orcid":"https://orcid.org/0000-0002-5265-903X"},"institutions":[{"id":"https://openalex.org/I34949971","display_name":"University of Jinan","ror":"https://ror.org/02mjz6f26","country_code":"CN","type":"education","lineage":["https://openalex.org/I34949971"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuehui Chen","raw_affiliation_strings":["School of Information Science, University of Jinan, Jinan 250022"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science, University of Jinan, Jinan 250022","institution_ids":["https://openalex.org/I34949971"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5007584947"],"corresponding_institution_ids":["https://openalex.org/I4210159676"],"apc_list":{"value":2550,"currency":"USD","value_usd":2550},"apc_paid":{"value":2550,"currency":"USD","value_usd":2550},"fwci":0.531,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.62784415,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2019","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9848999977111816,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9848999977111816,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10812","display_name":"Human Pose and Action Recognition","score":0.9599000215530396,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7314215898513794},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.702973484992981},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.6547561287879944},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.41341981291770935},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.39728057384490967},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.36115527153015137},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3553837537765503},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11932873725891113},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07620418071746826},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.035432368516922}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7314215898513794},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.702973484992981},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.6547561287879944},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.41341981291770935},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.39728057384490967},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.36115527153015137},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3553837537765503},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11932873725891113},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07620418071746826},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.035432368516922},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1155/2019/1603867","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2019/1603867","pdf_url":"https://downloads.hindawi.com/journals/complexity/2019/1603867.pdf","source":{"id":"https://openalex.org/S207319443","display_name":"Complexity","issn_l":"1076-2787","issn":["1076-2787","1099-0526"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complexity","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:hin:complx:1603867","is_oa":false,"landing_page_url":"http://downloads.hindawi.com/journals/8503/2019/1603867.xml","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:8ea55c28ca07474986f6d799af8b6bcc","is_oa":true,"landing_page_url":"https://doaj.org/article/8ea55c28ca07474986f6d799af8b6bcc","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Complexity, Vol 2019 (2019)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1155/2019/1603867","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2019/1603867","pdf_url":"https://downloads.hindawi.com/journals/complexity/2019/1603867.pdf","source":{"id":"https://openalex.org/S207319443","display_name":"Complexity","issn_l":"1076-2787","issn":["1076-2787","1099-0526"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complexity","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1851553357","display_name":null,"funder_award_id":"61873270","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2422649448","display_name":null,"funder_award_id":"20120072110040","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G3226960565","display_name":null,"funder_award_id":"20120072110040","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3939025267","display_name":null,"funder_award_id":"61702445","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G6668634586","display_name":null,"funder_award_id":"61702445","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321106","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2959019559.pdf","grobid_xml":"https://content.openalex.org/works/W2959019559.grobid-xml"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W1186776093","https://openalex.org/W1411285485","https://openalex.org/W1494484168","https://openalex.org/W1583569401","https://openalex.org/W1597115599","https://openalex.org/W1759122038","https://openalex.org/W1966553114","https://openalex.org/W1978362452","https://openalex.org/W1984148780","https://openalex.org/W1995173448","https://openalex.org/W1999118478","https://openalex.org/W2000668242","https://openalex.org/W2003031198","https://openalex.org/W2009540433","https://openalex.org/W2018559830","https://openalex.org/W2022965734","https://openalex.org/W2030922238","https://openalex.org/W2048356293","https://openalex.org/W2053765706","https://openalex.org/W2063542781","https://openalex.org/W2069217708","https://openalex.org/W2079017843","https://openalex.org/W2084246818","https://openalex.org/W2087158205","https://openalex.org/W2090561245","https://openalex.org/W2091169672","https://openalex.org/W2094764962","https://openalex.org/W2095753590","https://openalex.org/W2097606916","https://openalex.org/W2108497461","https://openalex.org/W2112917913","https://openalex.org/W2121464890","https://openalex.org/W2125463451","https://openalex.org/W2130452502","https://openalex.org/W2132292391","https://openalex.org/W2134920945","https://openalex.org/W2141935262","https://openalex.org/W2145957695","https://openalex.org/W2148143831","https://openalex.org/W2151965879","https://openalex.org/W2151984950","https://openalex.org/W2156125289","https://openalex.org/W2156690214","https://openalex.org/W2159199134","https://openalex.org/W2168190728","https://openalex.org/W2170366998","https://openalex.org/W2205505631","https://openalex.org/W2209329607","https://openalex.org/W2278741011","https://openalex.org/W2313411748","https://openalex.org/W2345938495","https://openalex.org/W2387572940","https://openalex.org/W2420474086","https://openalex.org/W2439245561","https://openalex.org/W2471518332","https://openalex.org/W2521877993","https://openalex.org/W2598495276","https://openalex.org/W2605516250","https://openalex.org/W2607378088","https://openalex.org/W2608035254","https://openalex.org/W2609394459","https://openalex.org/W2642879556","https://openalex.org/W2738151103","https://openalex.org/W2748860630","https://openalex.org/W2754153514","https://openalex.org/W2767496117","https://openalex.org/W2768705872","https://openalex.org/W2768844677","https://openalex.org/W2770827559","https://openalex.org/W2790646181","https://openalex.org/W2795004691","https://openalex.org/W2799630004","https://openalex.org/W2803011470","https://openalex.org/W2804549231","https://openalex.org/W2807342250","https://openalex.org/W2889929401","https://openalex.org/W2907707247","https://openalex.org/W4232920930","https://openalex.org/W6735888752"],"related_works":["https://openalex.org/W2898732673","https://openalex.org/W2410053581","https://openalex.org/W2383658677","https://openalex.org/W3123203398","https://openalex.org/W2391251536","https://openalex.org/W1972473893","https://openalex.org/W2466435674","https://openalex.org/W2362198218","https://openalex.org/W2765200542","https://openalex.org/W1982750869"],"abstract_inverted_index":{"Lysine":[0],"lipoylation":[1,47,108,173],"is":[2,163],"a":[3,17,28,78,118,134],"special":[4],"type":[5],"of":[6,73,83,87,125,208,212],"posttranslational":[7],"modification":[8,18,74,88,174,213],"in":[9,21,31,49,61,70,122,172,183,186,189,192,196],"both":[10],"prokaryotes\u2019":[11],"and":[12,26,39,95,110,149,194,210],"eukaryotes\u2019":[13],"proteomics":[14],"researches.":[15],"Such":[16],"takes":[19],"part":[20],"several":[22,65],"significant":[23],"biological":[24],"processions":[25],"plays":[27,67],"key":[29],"role":[30,69],"the":[32,50,53,71,80,84,91,96,104,107,111,123,140,145,153,158,168,203,206],"cellular":[33],"level.":[34],"In":[35,128],"order":[36],"to":[37,165],"construct":[38],"design":[40],"an":[41],"accurate":[42],"classification":[43,120,154,170],"algorithm":[44,162],"for":[45],"identifying":[46],"sites":[48,89],"protein":[51],"level,":[52],"computational":[54],"approaches":[55],"should":[56],"be":[57,115],"taken":[58],"into":[59],"account":[60],"this":[62,129],"field.":[63],"Meanwhile,":[64,199],"factors":[66],"different":[68],"identification":[72,86,211],"sites.":[75,214],"Considering":[76],"such":[77],"situation,":[79],"foundational":[81],"elements":[82],"effective":[85,98],"are":[90],"available":[92],"feature":[93],"description":[94],"high":[97],"classification.":[99],"With":[100],"these":[101],"two":[102,141],"elements,":[103],"distinguishing":[105],"between":[106,205],"samples":[109,113],"nonlipoylation":[112],"can":[114,180],"treated":[116],"as":[117,152],"typical":[119],"issue":[121,171],"field":[124],"machine":[126],"learning.":[127],"work,":[130],"we":[131,200],"have":[132,201],"proposed":[133,178],"method":[135,179],"named":[136],"LipoFNT,":[137],"which":[138],"employed":[139],"featuring":[142],"sets,":[143],"including":[144],"Position\u2010Specific":[146],"Scoring":[147],"Matrix":[148],"bi\u2010profile":[150],"Bayesian,":[151],"features.":[155],"And":[156],"then,":[157],"flexible":[159],"neural":[160],"tree":[161],"utilized":[164],"deal":[166],"with":[167],"imbalance":[169],"sample":[175],"dataset.":[176],"The":[177],"achieve":[181],"81.07%":[182],"sn%,":[184],"80.29%":[185],"sp,":[187],"80.68%":[188],"Acc,":[190],"0.8076":[191],"F1,":[193],"0.6136":[195],"MCC,":[197],"respectively.":[198],"demonstrated":[202],"relationship":[204],"lengths":[207],"peptide":[209]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
