{"id":"https://openalex.org/W2883566561","doi":"https://doi.org/10.1155/2018/4625394","title":"Creation of Individual Scientific Concept-Centered Semantic Maps Based on Automated Text-Mining Analysis of PubMed","display_name":"Creation of Individual Scientific Concept-Centered Semantic Maps Based on Automated Text-Mining Analysis of PubMed","publication_year":2018,"publication_date":"2018-07-26","ids":{"openalex":"https://openalex.org/W2883566561","doi":"https://doi.org/10.1155/2018/4625394","mag":"2883566561","pmid":"https://pubmed.ncbi.nlm.nih.gov/30147721"},"language":"en","primary_location":{"id":"doi:10.1155/2018/4625394","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2018/4625394","pdf_url":"http://downloads.hindawi.com/archive/2018/4625394.pdf","source":{"id":"https://openalex.org/S146125958","display_name":"Advances in Bioinformatics","issn_l":"1687-8027","issn":["1687-8027","1687-8035"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"http://downloads.hindawi.com/archive/2018/4625394.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085376050","display_name":"Ekaterina V. Ilgisonis","orcid":"https://orcid.org/0000-0003-4039-3454"},"institutions":[{"id":"https://openalex.org/I4210152028","display_name":"Institute of Biomedical Chemistry","ror":"https://ror.org/040wrkp27","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210152028"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Ekaterina Ilgisonis","raw_affiliation_strings":["Institute of Biomedical Chemistry, RAS, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Chemistry, RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210152028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025220961","display_name":"Andrey Lisitsa","orcid":"https://orcid.org/0000-0003-2852-102X"},"institutions":[{"id":"https://openalex.org/I4210152028","display_name":"Institute of Biomedical Chemistry","ror":"https://ror.org/040wrkp27","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210152028"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Andrey Lisitsa","raw_affiliation_strings":["Institute of Biomedical Chemistry, RAS, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Chemistry, RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210152028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036078740","display_name":"Valerya Kudryavtseva","orcid":null},"institutions":[{"id":"https://openalex.org/I117963711","display_name":"Kuban State University","ror":"https://ror.org/01yqewm58","country_code":"RU","type":"education","lineage":["https://openalex.org/I117963711"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Valerya Kudryavtseva","raw_affiliation_strings":["KuB Ltd., Russia"],"affiliations":[{"raw_affiliation_string":"KuB Ltd., Russia","institution_ids":["https://openalex.org/I117963711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076921210","display_name":"Elena A. Ponomarenko","orcid":"https://orcid.org/0000-0001-8527-6003"},"institutions":[{"id":"https://openalex.org/I4210152028","display_name":"Institute of Biomedical Chemistry","ror":"https://ror.org/040wrkp27","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210152028"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Elena Ponomarenko","raw_affiliation_strings":["Institute of Biomedical Chemistry, RAS, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Chemistry, RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210152028"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5076921210"],"corresponding_institution_ids":["https://openalex.org/I4210152028"],"apc_list":null,"apc_paid":null,"fwci":0.8351,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.72492417,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2018","issue":null,"first_page":"1","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9664000272750854,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9524999856948853,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7080028057098389},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5902075171470642},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.5101435780525208},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5096757411956787},{"id":"https://openalex.org/keywords/semantic-analysis","display_name":"Semantic analysis (machine learning)","score":0.4167412519454956},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3077542781829834}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7080028057098389},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5902075171470642},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.5101435780525208},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5096757411956787},{"id":"https://openalex.org/C2777946921","wikidata":"https://www.wikidata.org/wiki/Q7449044","display_name":"Semantic analysis (machine learning)","level":2,"score":0.4167412519454956},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3077542781829834}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1155/2018/4625394","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2018/4625394","pdf_url":"http://downloads.hindawi.com/archive/2018/4625394.pdf","source":{"id":"https://openalex.org/S146125958","display_name":"Advances in Bioinformatics","issn_l":"1687-8027","issn":["1687-8027","1687-8035"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30147721","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30147721","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:5051110","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6083525","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1155/2018/4625394","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2018/4625394","pdf_url":"http://downloads.hindawi.com/archive/2018/4625394.pdf","source":{"id":"https://openalex.org/S146125958","display_name":"Advances in Bioinformatics","issn_l":"1687-8027","issn":["1687-8027","1687-8035"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2883566561.pdf","grobid_xml":"https://content.openalex.org/works/W2883566561.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W51572754","https://openalex.org/W1963704941","https://openalex.org/W1973496031","https://openalex.org/W1977184198","https://openalex.org/W1977794119","https://openalex.org/W1993837100","https://openalex.org/W2001882305","https://openalex.org/W2003352260","https://openalex.org/W2024224726","https://openalex.org/W2026265322","https://openalex.org/W2029012581","https://openalex.org/W2031774647","https://openalex.org/W2040099651","https://openalex.org/W2060769471","https://openalex.org/W2069627147","https://openalex.org/W2078859186","https://openalex.org/W2085574038","https://openalex.org/W2091986044","https://openalex.org/W2095376580","https://openalex.org/W2103477204","https://openalex.org/W2114649195","https://openalex.org/W2118229453","https://openalex.org/W2132784310","https://openalex.org/W2136950562","https://openalex.org/W2137817561","https://openalex.org/W2151598072","https://openalex.org/W2159583324","https://openalex.org/W2159675211","https://openalex.org/W2242981819","https://openalex.org/W2276650506","https://openalex.org/W2317664229","https://openalex.org/W2415433719","https://openalex.org/W2419614516","https://openalex.org/W2491350608","https://openalex.org/W2503940607","https://openalex.org/W2760377755","https://openalex.org/W2775612596","https://openalex.org/W2798625886","https://openalex.org/W2805947038","https://openalex.org/W4210335102","https://openalex.org/W4238094324","https://openalex.org/W4241813372"],"related_works":["https://openalex.org/W4213212078","https://openalex.org/W2187227032","https://openalex.org/W2112788825","https://openalex.org/W1963735073","https://openalex.org/W4233129888","https://openalex.org/W106707639","https://openalex.org/W2146247781","https://openalex.org/W2144684733","https://openalex.org/W4299950557","https://openalex.org/W2575246084"],"abstract_inverted_index":{"Concept-centered":[0],"semantic":[1,21,57,78],"maps":[2],"were":[3,49],"created":[4,80],"based":[5,52,81,100],"on":[6,53,82,101],"a":[7,20,97],"text-mining":[8],"analysis":[9,99],"of":[10,19,30,40,56,65,104],"PubMed":[11,105],"using":[12],"the":[13,38,46,54,63,73,83,94,102,112],"BiblioEngine_v2018":[14],"software.":[15],"The":[16,43],"objects":[17,48,70],"(\"concepts\")":[18],"map":[22,79],"can":[23],"be":[24],"MeSH-terms":[25],"or":[26],"other":[27,95],"terms":[28],"(names":[29],"proteins,":[31],"diseases,":[32],"chemical":[33],"compounds,":[34],"etc.)":[35],"structured":[36],"in":[37],"form":[39],"controlled":[41],"vocabularies.":[42],"edges":[44],"between":[45],"two":[47],"automatically":[50],"calculated":[51],"index":[55],"similarity,":[58],"which":[59],"is":[60],"proportional":[61],"to":[62,68,89,110],"number":[64],"publications":[66],"related":[67],"both":[69],"simultaneously.":[71],"On":[72,93],"one":[74],"hand,":[75,96],"an":[76],"individual":[77],"already":[84],"published":[85],"papers":[86],"allows":[87],"us":[88,109],"trace":[90],"scientific":[91],"inquiry.":[92],"prospective":[98],"study":[103],"search":[106],"history":[107],"enables":[108],"determine":[111],"possible":[113],"directions":[114],"for":[115],"future":[116],"research.":[117]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
