{"id":"https://openalex.org/W1985732869","doi":"https://doi.org/10.1155/2013/169526","title":"SIVIC: Open-Source, Standards-Based Software for DICOM MR Spectroscopy Workflows","display_name":"SIVIC: Open-Source, Standards-Based Software for DICOM MR Spectroscopy Workflows","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W1985732869","doi":"https://doi.org/10.1155/2013/169526","mag":"1985732869","pmid":"https://pubmed.ncbi.nlm.nih.gov/23970895"},"language":"en","primary_location":{"id":"doi:10.1155/2013/169526","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2013/169526","pdf_url":"https://downloads.hindawi.com/journals/ijbi/2013/169526.pdf","source":{"id":"https://openalex.org/S108408918","display_name":"International Journal of Biomedical Imaging","issn_l":"1687-4188","issn":["1687-4188","1687-4196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Biomedical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://downloads.hindawi.com/journals/ijbi/2013/169526.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009379594","display_name":"Jason C. Crane","orcid":"https://orcid.org/0000-0002-1145-5639"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jason C. Crane","raw_affiliation_strings":["Surbeck Laboratory for Advanced Imaging, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158-2330, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Surbeck Laboratory for Advanced Imaging, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158-2330, USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087354138","display_name":"Marram P. Olson","orcid":null},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marram P. Olson","raw_affiliation_strings":["Surbeck Laboratory for Advanced Imaging, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158-2330, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Surbeck Laboratory for Advanced Imaging, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158-2330, USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031916033","display_name":"Sarah J. Nelson","orcid":"https://orcid.org/0000-0001-7015-8442"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarah J. Nelson","raw_affiliation_strings":["Surbeck Laboratory for Advanced Imaging, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158-2330, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Surbeck Laboratory for Advanced Imaging, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158-2330, USA","institution_ids":["https://openalex.org/I180670191"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5009379594"],"corresponding_institution_ids":["https://openalex.org/I180670191"],"apc_list":{"value":900,"currency":"USD","value_usd":900},"apc_paid":{"value":900,"currency":"USD","value_usd":900},"fwci":3.8019,"has_fulltext":true,"cited_by_count":92,"citation_normalized_percentile":{"value":0.9256015,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"2013","issue":null,"first_page":"1","last_page":"12"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10372","display_name":"Cardiac Imaging and Diagnostics","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dicom","display_name":"DICOM","score":0.8787112236022949},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8022794723510742},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7689557075500488},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6449463367462158},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.586214542388916},{"id":"https://openalex.org/keywords/scanner","display_name":"Scanner","score":0.5522925853729248},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.42889901995658875},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3212890625},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.25360316038131714},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22013643383979797},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.11541131138801575}],"concepts":[{"id":"https://openalex.org/C77331912","wikidata":"https://www.wikidata.org/wiki/Q81095","display_name":"DICOM","level":2,"score":0.8787112236022949},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8022794723510742},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7689557075500488},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6449463367462158},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.586214542388916},{"id":"https://openalex.org/C2779751349","wikidata":"https://www.wikidata.org/wiki/Q1474480","display_name":"Scanner","level":2,"score":0.5522925853729248},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.42889901995658875},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3212890625},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.25360316038131714},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22013643383979797},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.11541131138801575},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1155/2013/169526","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2013/169526","pdf_url":"https://downloads.hindawi.com/journals/ijbi/2013/169526.pdf","source":{"id":"https://openalex.org/S108408918","display_name":"International Journal of Biomedical Imaging","issn_l":"1687-4188","issn":["1687-4188","1687-4196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Biomedical Imaging","raw_type":"journal-article"},{"id":"pmid:23970895","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23970895","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of biomedical imaging","raw_type":null},{"id":"pmh:oai:doaj.org/article:c86ce48d21af4fe7993f9454f1b66cf2","is_oa":true,"landing_page_url":"https://doaj.org/article/c86ce48d21af4fe7993f9454f1b66cf2","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"International Journal of Biomedical Imaging, Vol 2013 (2013)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2740355","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3732592","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3732592","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3732592","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Int J Biomed Imaging","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1155/2013/169526","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2013/169526","pdf_url":"https://downloads.hindawi.com/journals/ijbi/2013/169526.pdf","source":{"id":"https://openalex.org/S108408918","display_name":"International Journal of Biomedical Imaging","issn_l":"1687-4188","issn":["1687-4188","1687-4196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Biomedical Imaging","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1258496044","display_name":null,"funder_award_id":"P41EB013598","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1742320338","display_name":null,"funder_award_id":"NIH RO1 CA127612","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6144091781","display_name":null,"funder_award_id":"NIH P41EB013598","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7071634666","display_name":null,"funder_award_id":"NIH P01 CA11816","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G942423679","display_name":null,"funder_award_id":"RO1 CA127612","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G979074091","display_name":null,"funder_award_id":"CA11816","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1985732869.pdf","grobid_xml":"https://content.openalex.org/works/W1985732869.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W51766260","https://openalex.org/W571345558","https://openalex.org/W1936578804","https://openalex.org/W1980178045","https://openalex.org/W1994416681","https://openalex.org/W2006669380","https://openalex.org/W2011593594","https://openalex.org/W2019335053","https://openalex.org/W2021314115","https://openalex.org/W2057555825","https://openalex.org/W2078042999","https://openalex.org/W2085091329","https://openalex.org/W2095839641","https://openalex.org/W2107866319","https://openalex.org/W2124956761","https://openalex.org/W2128715536","https://openalex.org/W2149746172"],"related_works":["https://openalex.org/W2352944256","https://openalex.org/W2528730528","https://openalex.org/W2358954258","https://openalex.org/W2376146719","https://openalex.org/W2355550873","https://openalex.org/W2370879019","https://openalex.org/W1513288651","https://openalex.org/W2351853078","https://openalex.org/W2347834369","https://openalex.org/W2021592708"],"abstract_inverted_index":{"Quantitative":[0],"analysis":[1,124],"of":[2,11,53,74,102,108,147,158],"magnetic":[3],"resonance":[4],"spectroscopic":[5],"imaging":[6],"(MRSI)":[7],"data":[8,55],"provides":[9,118,127],"maps":[10],"metabolic":[12],"parameters":[13],"that":[14,92],"show":[15],"promise":[16],"for":[17,48,77,98],"improving":[18],"medical":[19],"diagnosis":[20],"and":[21,38,69,80,89,100,120,123,126,154],"therapeutic":[22],"monitoring.":[23],"While":[24],"anatomical":[25],"images":[26],"are":[27,62,140],"routinely":[28],"reconstructed":[29],"on":[30],"the":[31,35,46,112,131,144,151],"scanner,":[32],"formatted":[33],"using":[34,40],"DICOM":[36,113],"standard,":[37,117],"interpreted":[39],"PACS":[41,157],"workstations,":[42],"this":[43],"is":[44,56,71,83],"not":[45],"case":[47],"MRSI":[49,54,103,161],"data.":[50,104,138],"The":[51],"evaluation":[52,99],"made":[57],"more":[58],"complex":[59],"because":[60],"files":[61],"typically":[63],"encoded":[64],"with":[65,136],"vendor-specific":[66,109],"file":[67],"formats":[68,110],"there":[70],"a":[72,84,94],"lack":[73],"standardized":[75],"tools":[76,128],"reconstruction,":[78],"processing,":[79],"visualization.":[81],"SIVIC":[82,148],"flexible":[85],"open-source":[86],"software":[87],"framework":[88],"application":[90],"suite":[91],"enables":[93],"complete":[95],"scanner-to-PACS":[96],"workflow":[97],"interpretation":[101],"It":[105],"supports":[106],"conversion":[107],"into":[111],"MR":[114],"spectroscopy":[115],"(MRS)":[116],"modular":[119],"extensible":[121],"reconstruction":[122],"pipelines,":[125],"to":[129,149,156],"support":[130,150],"unique":[132],"visualization":[133],"requirements":[134],"associated":[135],"such":[137],"Workflows":[139],"presented":[141],"which":[142],"demonstrate":[143],"routine":[145],"use":[146],"acquisition,":[152],"analysis,":[153],"delivery":[155],"clinical":[159],"(1)H":[160],"datasets":[162],"at":[163],"UCSF.":[164]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":10},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":2}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
