{"id":"https://openalex.org/W1978957712","doi":"https://doi.org/10.1155/2011/616382","title":"Modeling of Neuronal Growth In Vitro: Comparison of Simulation Tools NETMORPH and CX3D","display_name":"Modeling of Neuronal Growth In Vitro: Comparison of Simulation Tools NETMORPH and CX3D","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1978957712","doi":"https://doi.org/10.1155/2011/616382","mag":"1978957712","pmid":"https://pubmed.ncbi.nlm.nih.gov/21436988"},"language":"en","primary_location":{"id":"doi:10.1155/2011/616382","is_oa":false,"landing_page_url":"https://doi.org/10.1155/2011/616382","pdf_url":null,"source":{"id":"https://openalex.org/S22696228","display_name":"EURASIP Journal on Bioinformatics and Systems Biology","issn_l":"1687-4145","issn":["1687-4145","1687-4153"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Bioinformatics and Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3171303","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083766231","display_name":"Jugoslava A\u0107imovi\u0107","orcid":"https://orcid.org/0000-0001-5216-681X"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"J A\u0107imovi\u0107","raw_affiliation_strings":["Department of Signal Processing, Tampere University of Technology, P.O. Box 553, 33101 Tampere, Finland","[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]"],"affiliations":[{"raw_affiliation_string":"Department of Signal Processing, Tampere University of Technology, P.O. Box 553, 33101 Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]},{"raw_affiliation_string":"[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]","institution_ids":["https://openalex.org/I4210133110"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011473530","display_name":"Tuomo M\u00e4ki\u2010Marttunen","orcid":"https://orcid.org/0000-0002-7082-2507"},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]},{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"T M\u00e4ki-Marttunen","raw_affiliation_strings":["Department of Signal Processing, Tampere University of Technology, Tampere, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Signal Processing, Tampere University of Technology, Tampere, Finland","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210133110"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011937259","display_name":"Riikka Havela","orcid":"https://orcid.org/0000-0002-3683-0343"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"R Havela","raw_affiliation_strings":["[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]"],"affiliations":[{"raw_affiliation_string":"[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]","institution_ids":["https://openalex.org/I4210133110"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021454710","display_name":"Heidi Teppola","orcid":null},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"H Teppola","raw_affiliation_strings":["[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]"],"affiliations":[{"raw_affiliation_string":"[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]","institution_ids":["https://openalex.org/I4210133110"]}]},{"author_position":"last","author":{"id":null,"display_name":"M-L Linne","orcid":null},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"M-L Linne","raw_affiliation_strings":["[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]"],"affiliations":[{"raw_affiliation_string":"[Department of Signal Processing, Tampere University of Technology, Tampere, FINLAND]","institution_ids":["https://openalex.org/I4210133110"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5083766231"],"corresponding_institution_ids":["https://openalex.org/I4210133110"],"apc_list":null,"apc_paid":null,"fwci":1.1277,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.75926512,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2011","issue":"1","first_page":"616382","last_page":"616382"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7729220390319824},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5230216383934021},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.4736539125442505},{"id":"https://openalex.org/keywords/graph-theory","display_name":"Graph theory","score":0.41034039855003357},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35827457904815674},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.34855592250823975},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.3293308615684509},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1417832374572754},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08199280500411987},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07322806119918823}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7729220390319824},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5230216383934021},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.4736539125442505},{"id":"https://openalex.org/C88230418","wikidata":"https://www.wikidata.org/wiki/Q131476","display_name":"Graph theory","level":2,"score":0.41034039855003357},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35827457904815674},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.34855592250823975},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.3293308615684509},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1417832374572754},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08199280500411987},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07322806119918823},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1155/2011/616382","is_oa":false,"landing_page_url":"https://doi.org/10.1155/2011/616382","pdf_url":null,"source":{"id":"https://openalex.org/S22696228","display_name":"EURASIP Journal on Bioinformatics and Systems Biology","issn_l":"1687-4145","issn":["1687-4145","1687-4153"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Bioinformatics and Systems Biology","raw_type":"journal-article"},{"id":"pmid:21436988","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21436988","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP journal on bioinformatics & systems biology","raw_type":null},{"id":"pmh:oai:europepmc.org:2177002","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3171303","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:europepmc.org:2177002","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3171303","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1529448825","https://openalex.org/W1591906140","https://openalex.org/W1747101780","https://openalex.org/W1982014815","https://openalex.org/W1999149787","https://openalex.org/W2011209444","https://openalex.org/W2013196233","https://openalex.org/W2017476860","https://openalex.org/W2032043732","https://openalex.org/W2036018768","https://openalex.org/W2036435819","https://openalex.org/W2043679829","https://openalex.org/W2057418611","https://openalex.org/W2070722739","https://openalex.org/W2083467805","https://openalex.org/W2086174087","https://openalex.org/W2095583801","https://openalex.org/W2096931059","https://openalex.org/W2102667107","https://openalex.org/W2131289027","https://openalex.org/W2134134192","https://openalex.org/W2153624566","https://openalex.org/W2171895829","https://openalex.org/W2396075472"],"related_works":["https://openalex.org/W2366107444","https://openalex.org/W1976205134","https://openalex.org/W2381570729","https://openalex.org/W4248336175","https://openalex.org/W2532801570","https://openalex.org/W4385627933","https://openalex.org/W2480127678","https://openalex.org/W2762831627","https://openalex.org/W2806270048","https://openalex.org/W4310605282"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
