{"id":"https://openalex.org/W2090703756","doi":"https://doi.org/10.1155/2010/924529","title":"From Experimental Approaches to Computational Techniques: A Review on the Prediction of Protein-Protein Interactions","display_name":"From Experimental Approaches to Computational Techniques: A Review on the Prediction of Protein-Protein Interactions","publication_year":2010,"publication_date":"2010-04-07","ids":{"openalex":"https://openalex.org/W2090703756","doi":"https://doi.org/10.1155/2010/924529","mag":"2090703756"},"language":"en","primary_location":{"id":"doi:10.1155/2010/924529","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2010/924529","pdf_url":"https://downloads.hindawi.com/archive/2010/924529.pdf","source":{"id":"https://openalex.org/S2788495","display_name":"Advances in Artificial Intelligence","issn_l":"1687-7470","issn":["1687-7470","1687-7489"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Artificial Intelligence","raw_type":"journal-article"},"type":"review","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://downloads.hindawi.com/archive/2010/924529.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024303177","display_name":"Fiona Browne","orcid":"https://orcid.org/0000-0003-0443-4730"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Fiona Browne","raw_affiliation_strings":["Faculty of Computing and Engineering, University of Ulster Jordanstown Campus, Shore Road, Newtownabbey, Co. Antrim BT37 0QB, UK"],"raw_orcid":"https://orcid.org/0000-0003-0443-4730","affiliations":[{"raw_affiliation_string":"Faculty of Computing and Engineering, University of Ulster Jordanstown Campus, Shore Road, Newtownabbey, Co. Antrim BT37 0QB, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024401909","display_name":"Huiru Zheng","orcid":"https://orcid.org/0000-0001-7648-8709"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Huiru Zheng","raw_affiliation_strings":["Faculty of Computing and Engineering, University of Ulster Jordanstown Campus, Shore Road, Newtownabbey, Co. Antrim BT37 0QB, UK"],"raw_orcid":"https://orcid.org/0000-0001-7648-8709","affiliations":[{"raw_affiliation_string":"Faculty of Computing and Engineering, University of Ulster Jordanstown Campus, Shore Road, Newtownabbey, Co. Antrim BT37 0QB, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100379058","display_name":"Haiying Wang","orcid":"https://orcid.org/0000-0001-8358-9065"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Haiying Wang","raw_affiliation_strings":["Faculty of Computing and Engineering, University of Ulster Jordanstown Campus, Shore Road, Newtownabbey, Co. Antrim BT37 0QB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computing and Engineering, University of Ulster Jordanstown Campus, Shore Road, Newtownabbey, Co. Antrim BT37 0QB, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050612781","display_name":"Francisco Azuaje","orcid":"https://orcid.org/0000-0002-9207-9072"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Francisco Azuaje","raw_affiliation_strings":["Laboratory of Cardiovascular Research, Public Research Centre for Health (CRP-Sant\u00e9), 120, route d'ArlonL-1150, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Cardiovascular Research, Public Research Centre for Health (CRP-Sant\u00e9), 120, route d'ArlonL-1150, Luxembourg","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5024303177"],"corresponding_institution_ids":["https://openalex.org/I138801177"],"apc_list":null,"apc_paid":null,"fwci":1.491,"has_fulltext":true,"cited_by_count":38,"citation_normalized_percentile":{"value":0.81470403,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2010","issue":null,"first_page":"1","last_page":"15"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9869999885559082,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8386484384536743},{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.7919718027114868},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.47441619634628296},{"id":"https://openalex.org/keywords/modelling-biological-systems","display_name":"Modelling biological systems","score":0.44526004791259766},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.42892026901245117},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.4272856116294861},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3540877103805542},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.32757169008255005},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3240453004837036},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29986608028411865},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12278532981872559}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8386484384536743},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.7919718027114868},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.47441619634628296},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.44526004791259766},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.42892026901245117},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4272856116294861},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3540877103805542},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.32757169008255005},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3240453004837036},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29986608028411865},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12278532981872559},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1155/2010/924529","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2010/924529","pdf_url":"https://downloads.hindawi.com/archive/2010/924529.pdf","source":{"id":"https://openalex.org/S2788495","display_name":"Advances in Artificial Intelligence","issn_l":"1687-7470","issn":["1687-7470","1687-7489"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Artificial Intelligence","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1155/2010/924529","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2010/924529","pdf_url":"https://downloads.hindawi.com/archive/2010/924529.pdf","source":{"id":"https://openalex.org/S2788495","display_name":"Advances in Artificial Intelligence","issn_l":"1687-7470","issn":["1687-7470","1687-7489"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Artificial Intelligence","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2090703756.pdf","grobid_xml":"https://content.openalex.org/works/W2090703756.grobid-xml"},"referenced_works_count":96,"referenced_works":["https://openalex.org/W327733334","https://openalex.org/W1486817521","https://openalex.org/W1651886044","https://openalex.org/W1652529314","https://openalex.org/W1811927564","https://openalex.org/W1967638691","https://openalex.org/W1967738476","https://openalex.org/W1973110501","https://openalex.org/W1989921625","https://openalex.org/W1994101847","https://openalex.org/W1994108141","https://openalex.org/W2001457899","https://openalex.org/W2021025020","https://openalex.org/W2027918926","https://openalex.org/W2037036397","https://openalex.org/W2037442572","https://openalex.org/W2040368665","https://openalex.org/W2040411864","https://openalex.org/W2042613054","https://openalex.org/W2043568498","https://openalex.org/W2046618236","https://openalex.org/W2050721857","https://openalex.org/W2057885377","https://openalex.org/W2061439657","https://openalex.org/W2065304353","https://openalex.org/W2079007492","https://openalex.org/W2079439457","https://openalex.org/W2079818352","https://openalex.org/W2080182143","https://openalex.org/W2084619201","https://openalex.org/W2087430029","https://openalex.org/W2088216962","https://openalex.org/W2095805667","https://openalex.org/W2099862356","https://openalex.org/W2100827857","https://openalex.org/W2101674614","https://openalex.org/W2103017472","https://openalex.org/W2104315543","https://openalex.org/W2107710781","https://openalex.org/W2108238425","https://openalex.org/W2109248504","https://openalex.org/W2112928083","https://openalex.org/W2113019448","https://openalex.org/W2113654464","https://openalex.org/W2116117181","https://openalex.org/W2116447934","https://openalex.org/W2117569775","https://openalex.org/W2118640031","https://openalex.org/W2119043225","https://openalex.org/W2120686074","https://openalex.org/W2124300909","https://openalex.org/W2124354935","https://openalex.org/W2125934144","https://openalex.org/W2128036243","https://openalex.org/W2128817214","https://openalex.org/W2130832525","https://openalex.org/W2131984349","https://openalex.org/W2132582966","https://openalex.org/W2133138357","https://openalex.org/W2133548874","https://openalex.org/W2133765683","https://openalex.org/W2134672568","https://openalex.org/W2134873429","https://openalex.org/W2136957665","https://openalex.org/W2138351249","https://openalex.org/W2142460132","https://openalex.org/W2145427519","https://openalex.org/W2146063629","https://openalex.org/W2147774652","https://openalex.org/W2149310258","https://openalex.org/W2152360905","https://openalex.org/W2152495216","https://openalex.org/W2153204532","https://openalex.org/W2153280946","https://openalex.org/W2153577994","https://openalex.org/W2155440340","https://openalex.org/W2155723007","https://openalex.org/W2156223899","https://openalex.org/W2157980843","https://openalex.org/W2158564991","https://openalex.org/W2159689273","https://openalex.org/W2162142896","https://openalex.org/W2164813401","https://openalex.org/W2164935229","https://openalex.org/W2164954378","https://openalex.org/W2166474856","https://openalex.org/W2166558964","https://openalex.org/W2167869241","https://openalex.org/W2168708357","https://openalex.org/W2170858229","https://openalex.org/W2540440381","https://openalex.org/W2799061466","https://openalex.org/W2917431650","https://openalex.org/W3140628481","https://openalex.org/W4252706339","https://openalex.org/W6888862598"],"related_works":["https://openalex.org/W2063905494","https://openalex.org/W4386563820","https://openalex.org/W631732704","https://openalex.org/W1968058641","https://openalex.org/W2155261113","https://openalex.org/W1748979965","https://openalex.org/W2057769265","https://openalex.org/W3199870583","https://openalex.org/W2009405916","https://openalex.org/W207829213"],"abstract_inverted_index":{"A":[0],"crucial":[1],"step":[2],"towards":[3],"understanding":[4,46],"the":[5,32,41,54,69,81,106,116,126,143],"properties":[6],"of":[7,17,35,47,56,62,71,75,83,108,118],"cellular":[8],"systems":[9],"in":[10,68,80,93,142],"organisms":[11],"is":[12],"to":[13,104,134],"map":[14],"their":[15,38],"network":[16],"protein-protein":[18],"interactions":[19,39],"(PPIs)":[20],"on":[21,115],"a":[22,51,72,113],"proteomic-wide":[23],"scale":[24],"completely":[25],"and":[26,37,49,91,99,124,129],"as":[27,29],"accurately":[28],"possible.":[30],"Uncovering":[31],"diverse":[33],"function":[34],"proteins":[36],"within":[40],"cell":[42],"may":[43],"improve":[44],"our":[45],"disease":[48],"provide":[50],"basis":[52],"for":[53],"development":[55,61],"novel":[57],"therapeutic":[58],"approaches.":[59],"The":[60],"large-scale":[63],"high-throughput":[64],"experiments":[65],"has":[66,78],"resulted":[67],"production":[70],"large":[73],"volume":[74],"data":[76,87],"which":[77],"aided":[79],"uncovering":[82],"PPIs.":[84,109],"However,":[85],"these":[86],"are":[88,102],"often":[89],"erroneous":[90],"limited":[92],"interactome":[94],"coverage.":[95],"Therefore,":[96],"additional":[97],"experimental":[98,128],"computational":[100,130],"methods":[101],"required":[103],"accelerate":[105],"discovery":[107],"This":[110],"paper":[111],"provides":[112],"review":[114],"prediction":[117,122],"PPIs":[119],"addressing":[120],"key":[121],"principles":[123],"highlighting":[125],"common":[127],"techniques":[131],"currently":[132],"employed":[133],"infer":[135],"PPI":[136],"networks":[137],"along":[138],"with":[139],"relevant":[140],"studies":[141],"area.":[144]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
