{"id":"https://openalex.org/W2079354411","doi":"https://doi.org/10.1155/2010/814127","title":"TRII: A Probabilistic Scoring of Drosophila melanogaster Translation Initiation Sites","display_name":"TRII: A Probabilistic Scoring of Drosophila melanogaster Translation Initiation Sites","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W2079354411","doi":"https://doi.org/10.1155/2010/814127","mag":"2079354411","pmid":"https://pubmed.ncbi.nlm.nih.gov/21318134"},"language":"en","primary_location":{"id":"doi:10.1155/2010/814127","is_oa":false,"landing_page_url":"https://doi.org/10.1155/2010/814127","pdf_url":null,"source":{"id":"https://openalex.org/S22696228","display_name":"EURASIP Journal on Bioinformatics and Systems Biology","issn_l":"1687-4145","issn":["1687-4145","1687-4153"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Bioinformatics and Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3171364","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054954864","display_name":"Michael P. Weir","orcid":"https://orcid.org/0000-0002-5999-4199"},"institutions":[{"id":"https://openalex.org/I100538780","display_name":"Wesleyan University","ror":"https://ror.org/05h7xva58","country_code":"US","type":"education","lineage":["https://openalex.org/I100538780"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael P. Weir","raw_affiliation_strings":["Department of Biology, Wesleyan University, Middletown, CT 06459, USA","Department of Biology Wesleyan University Middletown CT"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Wesleyan University, Middletown, CT 06459, USA","institution_ids":["https://openalex.org/I100538780"]},{"raw_affiliation_string":"Department of Biology Wesleyan University Middletown CT","institution_ids":["https://openalex.org/I100538780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081498801","display_name":"Michael Rice","orcid":"https://orcid.org/0000-0001-5150-4792"},"institutions":[{"id":"https://openalex.org/I100538780","display_name":"Wesleyan University","ror":"https://ror.org/05h7xva58","country_code":"US","type":"education","lineage":["https://openalex.org/I100538780"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael D. Rice","raw_affiliation_strings":["Department of Mathematics and Computer Science, Wesleyan University, Middletown, CT#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, Wesleyan University, Middletown, CT#TAB#","institution_ids":["https://openalex.org/I100538780"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I100538780"],"apc_list":null,"apc_paid":null,"fwci":0.4986,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.63695153,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2010","issue":null,"first_page":"1","last_page":"14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7258046269416809},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.6717263460159302},{"id":"https://openalex.org/keywords/eukaryotic-translation","display_name":"Eukaryotic translation","score":0.663142740726471},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.55330491065979},{"id":"https://openalex.org/keywords/drosophila-melanogaster","display_name":"Drosophila melanogaster","score":0.4798521399497986},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.38086217641830444},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3527156710624695},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3073870539665222},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17363837361335754},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12950602173805237}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7258046269416809},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.6717263460159302},{"id":"https://openalex.org/C4718897","wikidata":"https://www.wikidata.org/wiki/Q5408698","display_name":"Eukaryotic translation","level":5,"score":0.663142740726471},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.55330491065979},{"id":"https://openalex.org/C2780104201","wikidata":"https://www.wikidata.org/wiki/Q130888","display_name":"Drosophila melanogaster","level":3,"score":0.4798521399497986},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38086217641830444},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3527156710624695},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3073870539665222},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17363837361335754},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12950602173805237},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1155/2010/814127","is_oa":false,"landing_page_url":"https://doi.org/10.1155/2010/814127","pdf_url":null,"source":{"id":"https://openalex.org/S22696228","display_name":"EURASIP Journal on Bioinformatics and Systems Biology","issn_l":"1687-4145","issn":["1687-4145","1687-4153"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Bioinformatics and Systems Biology","raw_type":"journal-article"},{"id":"pmid:21318134","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21318134","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP journal on bioinformatics & systems biology","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:2177063","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3171364","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:europepmc.org:2177063","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3171364","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W1543459401","https://openalex.org/W1977196999","https://openalex.org/W1995875735","https://openalex.org/W2001730018","https://openalex.org/W2003217244","https://openalex.org/W2013947447","https://openalex.org/W2018919734","https://openalex.org/W2022236187","https://openalex.org/W2044995847","https://openalex.org/W2045348184","https://openalex.org/W2052503008","https://openalex.org/W2058426472","https://openalex.org/W2058581494","https://openalex.org/W2073575016","https://openalex.org/W2079517684","https://openalex.org/W2091607609","https://openalex.org/W2097654910","https://openalex.org/W2099681226","https://openalex.org/W2099762535","https://openalex.org/W2101836338","https://openalex.org/W2102120094","https://openalex.org/W2110511794","https://openalex.org/W2116654909","https://openalex.org/W2118533197","https://openalex.org/W2119336718","https://openalex.org/W2125538599","https://openalex.org/W2136910716","https://openalex.org/W2143836724","https://openalex.org/W2157009395","https://openalex.org/W2157215359","https://openalex.org/W2166187656","https://openalex.org/W2168436863","https://openalex.org/W2993383518"],"related_works":["https://openalex.org/W2587366952","https://openalex.org/W2393920775","https://openalex.org/W2014093629","https://openalex.org/W3216649527","https://openalex.org/W4230768823","https://openalex.org/W4238951837","https://openalex.org/W2901430522","https://openalex.org/W4283746337","https://openalex.org/W1590929635","https://openalex.org/W2059998368"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
