{"id":"https://openalex.org/W2028843648","doi":"https://doi.org/10.1155/2009/616234","title":"Assessing the Exceptionality of Coloured Motifs in Networks","display_name":"Assessing the Exceptionality of Coloured Motifs in Networks","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W2028843648","doi":"https://doi.org/10.1155/2009/616234","mag":"2028843648","pmid":"https://pubmed.ncbi.nlm.nih.gov/19190777"},"language":"en","primary_location":{"id":"doi:10.1155/2009/616234","is_oa":false,"landing_page_url":"https://doi.org/10.1155/2009/616234","pdf_url":null,"source":{"id":"https://openalex.org/S22696228","display_name":"EURASIP Journal on Bioinformatics and Systems Biology","issn_l":"1687-4145","issn":["1687-4145","1687-4153"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Bioinformatics and Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10230/22983","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068389518","display_name":"Sophie Schbath","orcid":"https://orcid.org/0000-0003-3574-8222"},"institutions":[{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]},{"id":"https://openalex.org/I4210159481","display_name":"Math\u00e9matiques et Informatique Appliqu\u00e9es du G\u00e9nome \u00e0 l'Environnement","ror":"https://ror.org/05qdnns64","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4210159481"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sophie Schbath","raw_affiliation_strings":["Institut National de la Recherche Agronomique, Unit\u00e9 Math\u00e9matique, Informatique et G\u00e9nome, Jouy-en-Josas, France","Unit\u00e9 Math\u00e9matique Informatique et G\u00e9nome","Laboratoire de Biom\u00e9trie et Biologie Evolutive - UMR 5558"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut National de la Recherche Agronomique, Unit\u00e9 Math\u00e9matique, Informatique et G\u00e9nome, Jouy-en-Josas, France","institution_ids":["https://openalex.org/I4210159481"]},{"raw_affiliation_string":"Unit\u00e9 Math\u00e9matique Informatique et G\u00e9nome","institution_ids":[]},{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive - UMR 5558","institution_ids":["https://openalex.org/I4210135640"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087487293","display_name":"Vincent Lacroix","orcid":"https://orcid.org/0000-0002-4235-8524"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vincent Lacroix","raw_affiliation_strings":["An algorithmic view on genomes, cells, and environments","Baobab","Centro de Regulaci\u00f3n Gen\u00f3mica"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"An algorithmic view on genomes, cells, and environments","institution_ids":[]},{"raw_affiliation_string":"Baobab","institution_ids":[]},{"raw_affiliation_string":"Centro de Regulaci\u00f3n Gen\u00f3mica","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110531794","display_name":"Marie-France Sagot","orcid":null},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marie-France Sagot","raw_affiliation_strings":["Laboratoire de Biom\u00e9trie et Biologie Evolutive - UMR 5558","Universit\u00e9 Claude Bernard Lyon 1","An algorithmic view on genomes, cells, and environments"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive - UMR 5558","institution_ids":["https://openalex.org/I4210135640"]},{"raw_affiliation_string":"Universit\u00e9 Claude Bernard Lyon 1","institution_ids":["https://openalex.org/I100532134"]},{"raw_affiliation_string":"An algorithmic view on genomes, cells, and environments","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.9585,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":{"value":0.74122328,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2009","issue":null,"first_page":"1","last_page":"9"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9462000131607056,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.7577318549156189},{"id":"https://openalex.org/keywords/poisson-distribution","display_name":"Poisson distribution","score":0.7531769275665283},{"id":"https://openalex.org/keywords/gaussian","display_name":"Gaussian","score":0.6110903024673462},{"id":"https://openalex.org/keywords/network-motif","display_name":"Network motif","score":0.5984666347503662},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5515477657318115},{"id":"https://openalex.org/keywords/null-model","display_name":"Null model","score":0.5359116196632385},{"id":"https://openalex.org/keywords/random-graph","display_name":"Random graph","score":0.4248616695404053},{"id":"https://openalex.org/keywords/vertex","display_name":"Vertex (graph theory)","score":0.41269171237945557},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.41013437509536743},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3895830512046814},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.3885079324245453},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.32221829891204834},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.3199276030063629},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.2927992641925812},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.20017901062965393}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.7577318549156189},{"id":"https://openalex.org/C100906024","wikidata":"https://www.wikidata.org/wiki/Q205692","display_name":"Poisson distribution","level":2,"score":0.7531769275665283},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.6110903024673462},{"id":"https://openalex.org/C60723933","wikidata":"https://www.wikidata.org/wiki/Q7001080","display_name":"Network motif","level":3,"score":0.5984666347503662},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5515477657318115},{"id":"https://openalex.org/C36382193","wikidata":"https://www.wikidata.org/wiki/Q7068966","display_name":"Null model","level":2,"score":0.5359116196632385},{"id":"https://openalex.org/C47458327","wikidata":"https://www.wikidata.org/wiki/Q910404","display_name":"Random graph","level":3,"score":0.4248616695404053},{"id":"https://openalex.org/C80899671","wikidata":"https://www.wikidata.org/wiki/Q1304193","display_name":"Vertex (graph theory)","level":3,"score":0.41269171237945557},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.41013437509536743},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3895830512046814},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.3885079324245453},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.32221829891204834},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.3199276030063629},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.2927992641925812},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.20017901062965393},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.1155/2009/616234","is_oa":false,"landing_page_url":"https://doi.org/10.1155/2009/616234","pdf_url":null,"source":{"id":"https://openalex.org/S22696228","display_name":"EURASIP Journal on Bioinformatics and Systems Biology","issn_l":"1687-4145","issn":["1687-4145","1687-4153"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Bioinformatics and Systems Biology","raw_type":"journal-article"},{"id":"pmid:19190777","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19190777","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP journal on bioinformatics & systems biology","raw_type":null},{"id":"pmh:oai:repositori.upf.edu:10230/22983","is_oa":true,"landing_page_url":"http://hdl.handle.net/10230/22983","pdf_url":null,"source":{"id":"https://openalex.org/S4306402615","display_name":"Repositori digital de la UPF (Universitat Pompeu Fabra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170486558","host_organization_name":"Universitat Pompeu Fabra","host_organization_lineage":["https://openalex.org/I170486558"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.289.258","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.289.258","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/f7/8a/EURASIP_J_Bioinform_Syst_Biol_2009_Oct_26_2009(1)_616234.tar.gz","raw_type":"text"},{"id":"pmh:oai:HAL:hal-00428313v1","is_oa":false,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-00428313","pdf_url":null,"source":{"id":"https://openalex.org/S4406922276","display_name":"INRIA a CCSD electronic archive server","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1687-4145","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:HAL:hal-02656035v1","is_oa":false,"landing_page_url":"https://hal.inrae.fr/hal-02656035","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"EURASIP Journal on Bioinformatics and Systems Biology, 2009, 2009, 9 p. on line. ⟨10.1155/2009/616234⟩","raw_type":"Journal articles"},{"id":"pmh:oai:europepmc.org:2177117","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3171434","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:repositori.upf.edu:10230/22983","is_oa":true,"landing_page_url":"http://hdl.handle.net/10230/22983","pdf_url":null,"source":{"id":"https://openalex.org/S4306402615","display_name":"Repositori digital de la UPF (Universitat Pompeu Fabra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170486558","host_organization_name":"Universitat Pompeu Fabra","host_organization_lineage":["https://openalex.org/I170486558"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1565474750","https://openalex.org/W1983202741","https://openalex.org/W1995885398","https://openalex.org/W2004724407","https://openalex.org/W2037585573","https://openalex.org/W2047306036","https://openalex.org/W2048596679","https://openalex.org/W2051358370","https://openalex.org/W2086615584","https://openalex.org/W2110699703","https://openalex.org/W2133095386","https://openalex.org/W2139343285","https://openalex.org/W2144885342","https://openalex.org/W2153624566","https://openalex.org/W2156737316","https://openalex.org/W2399991609","https://openalex.org/W2478722229","https://openalex.org/W3103786587","https://openalex.org/W3144881883","https://openalex.org/W4252973173","https://openalex.org/W4256140420"],"related_works":["https://openalex.org/W3079957389","https://openalex.org/W2888027709","https://openalex.org/W3113308218","https://openalex.org/W4205962317","https://openalex.org/W4302878405","https://openalex.org/W2184561631","https://openalex.org/W2938754949","https://openalex.org/W2573830947","https://openalex.org/W2895237160","https://openalex.org/W1965687403"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}