{"id":"https://openalex.org/W2126527016","doi":"https://doi.org/10.1155/2009/598241","title":"The FAST-AIMS Clinical Mass Spectrometry Analysis System","display_name":"The FAST-AIMS Clinical Mass Spectrometry Analysis System","publication_year":2009,"publication_date":"2009-07-09","ids":{"openalex":"https://openalex.org/W2126527016","doi":"https://doi.org/10.1155/2009/598241","mag":"2126527016","pmid":"https://pubmed.ncbi.nlm.nih.gov/19956420"},"language":"en","primary_location":{"id":"doi:10.1155/2009/598241","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2009/598241","pdf_url":"https://downloads.hindawi.com/archive/2009/598241.pdf","source":{"id":"https://openalex.org/S146125958","display_name":"Advances in Bioinformatics","issn_l":"1687-8027","issn":["1687-8027","1687-8035"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://downloads.hindawi.com/archive/2009/598241.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050154951","display_name":"Nafeh Fananapazir","orcid":null},"institutions":[{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]},{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nafeh Fananapazir","raw_affiliation_strings":["Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA","Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37232, USA"],"affiliations":[{"raw_affiliation_string":"Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA","institution_ids":["https://openalex.org/I1285204247"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37232, USA","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027728817","display_name":"Alexander Statnikov","orcid":null},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Statnikov","raw_affiliation_strings":["Center for Health Informatics and Bioinformatics, New York University, NY 10016, USA","Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37232, USA"],"affiliations":[{"raw_affiliation_string":"Center for Health Informatics and Bioinformatics, New York University, NY 10016, USA","institution_ids":["https://openalex.org/I57206974"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37232, USA","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113735333","display_name":"Constantin Aliferis","orcid":null},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]},{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Constantin F. Aliferis","raw_affiliation_strings":["Center for Health Informatics and Bioinformatics, New York University, NY 10016, USA","Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37232, USA"],"affiliations":[{"raw_affiliation_string":"Center for Health Informatics and Bioinformatics, New York University, NY 10016, USA","institution_ids":["https://openalex.org/I57206974"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37232, USA","institution_ids":["https://openalex.org/I200719446"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5113735333"],"corresponding_institution_ids":["https://openalex.org/I200719446","https://openalex.org/I57206974"],"apc_list":null,"apc_paid":null,"fwci":0.1666,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.55271257,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"2009","issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7483057975769043},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.5926387310028076},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5639218688011169},{"id":"https://openalex.org/keywords/data-pre-processing","display_name":"Data pre-processing","score":0.4942033588886261},{"id":"https://openalex.org/keywords/automation","display_name":"Automation","score":0.46948179602622986},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4243302345275879},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.41454261541366577},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37134236097335815},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1700485348701477},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.07167410850524902}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7483057975769043},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.5926387310028076},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5639218688011169},{"id":"https://openalex.org/C10551718","wikidata":"https://www.wikidata.org/wiki/Q5227332","display_name":"Data pre-processing","level":2,"score":0.4942033588886261},{"id":"https://openalex.org/C115901376","wikidata":"https://www.wikidata.org/wiki/Q184199","display_name":"Automation","level":2,"score":0.46948179602622986},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4243302345275879},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.41454261541366577},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37134236097335815},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1700485348701477},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.07167410850524902},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1155/2009/598241","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2009/598241","pdf_url":"https://downloads.hindawi.com/archive/2009/598241.pdf","source":{"id":"https://openalex.org/S146125958","display_name":"Advances in Bioinformatics","issn_l":"1687-8027","issn":["1687-8027","1687-8035"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19956420","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19956420","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2775698","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2775698","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Adv Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1155/2009/598241","is_oa":true,"landing_page_url":"https://doi.org/10.1155/2009/598241","pdf_url":"https://downloads.hindawi.com/archive/2009/598241.pdf","source":{"id":"https://openalex.org/S146125958","display_name":"Advances in Bioinformatics","issn_l":"1687-8027","issn":["1687-8027","1687-8035"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319869","host_organization_name":"Hindawi Publishing Corporation","host_organization_lineage":["https://openalex.org/P4310319869"],"host_organization_lineage_names":["Hindawi Publishing Corporation"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.46000000834465027}],"awards":[{"id":"https://openalex.org/G2748435342","display_name":null,"funder_award_id":"2R56LM007948-04A1","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5037577809","display_name":null,"funder_award_id":"2R56LM007948-04A1","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G5302508129","display_name":null,"funder_award_id":"T15 LM07450-01","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G5721433476","display_name":null,"funder_award_id":"T15 LM07450-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2126527016.pdf","grobid_xml":"https://content.openalex.org/works/W2126527016.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W193615737","https://openalex.org/W620293343","https://openalex.org/W649532618","https://openalex.org/W1538266555","https://openalex.org/W1545513697","https://openalex.org/W1556472699","https://openalex.org/W1564049492","https://openalex.org/W1590086676","https://openalex.org/W1999616914","https://openalex.org/W2022441134","https://openalex.org/W2048398689","https://openalex.org/W2052088499","https://openalex.org/W2054395884","https://openalex.org/W2087025987","https://openalex.org/W2087347434","https://openalex.org/W2098475626","https://openalex.org/W2115358726","https://openalex.org/W2121273346","https://openalex.org/W2123989476","https://openalex.org/W2129925362","https://openalex.org/W2131822674","https://openalex.org/W2139564441","https://openalex.org/W2143426320","https://openalex.org/W2143773597","https://openalex.org/W2146197170","https://openalex.org/W2153370481","https://openalex.org/W2161371306"],"related_works":["https://openalex.org/W2989490741","https://openalex.org/W3092506759","https://openalex.org/W2367545121","https://openalex.org/W4248881655","https://openalex.org/W2482165163","https://openalex.org/W3010890513","https://openalex.org/W120741642","https://openalex.org/W138569904","https://openalex.org/W2390914021","https://openalex.org/W2389417819"],"abstract_inverted_index":{"Within":[0],"clinical":[1],"proteomics,":[2],"mass":[3,55,105],"spectrometry":[4,56,106],"analysis":[5,58,103],"of":[6,17,38,54,82,104,119],"biological":[7],"samples":[8],"is":[9,94,125],"emerging":[10],"as":[11],"an":[12,95],"important":[13,26],"high-throughput":[14],"technology,":[15],"capable":[16],"producing":[18],"powerful":[19],"diagnostic":[20],"and":[21,24,35,62,67,90,97,117],"prognostic":[22],"models":[23],"identifying":[25],"disease":[27],"biomarkers.":[28],"As":[29],"interest":[30],"in":[31],"this":[32,78],"area":[33],"grows,":[34],"the":[36,45,115,120],"number":[37],"such":[39],"proteomics":[40],"datasets":[41],"continues":[42],"to":[43,76],"increase,":[44],"need":[46,79],"has":[47],"developed":[48],"for":[49,101,128,130],"efficient,":[50],"comprehensive,":[51],"reproducible":[52],"methods":[53],"data":[57,83],"by":[59],"both":[60],"experts":[61],"nonexperts.":[63],"We":[64],"have":[65],"designed":[66],"implemented":[68],"a":[69],"stand-alone":[70,99],"software":[71,100],"system,":[72],"FAST-AIMS,":[73],"which":[74],"seeks":[75],"meet":[77],"through":[80],"automation":[81],"preprocessing,":[84],"feature":[85],"selection,":[86],"classification":[87],"model":[88],"generation,":[89],"performance":[91],"estimation.":[92],"FAST-AIMS":[93,121],"efficient":[96],"user-friendly":[98],"predictive":[102],"data.":[107],"The":[108,123],"present":[109],"resource":[110],"review":[111],"paper":[112],"will":[113],"describe":[114],"features":[116],"use":[118],"system.":[122],"system":[124],"freely":[126],"available":[127],"download":[129],"noncommercial":[131],"use.":[132]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
