{"id":"https://openalex.org/W4406328731","doi":"https://doi.org/10.1145/3706890.3707027","title":"Network pharmacology analysis and molecular docking of Phellodendri amurensis cortex in the treatment of Parkinson's disease","display_name":"Network pharmacology analysis and molecular docking of Phellodendri amurensis cortex in the treatment of Parkinson's disease","publication_year":2024,"publication_date":"2024-08-13","ids":{"openalex":"https://openalex.org/W4406328731","doi":"https://doi.org/10.1145/3706890.3707027"},"language":"en","primary_location":{"id":"doi:10.1145/3706890.3707027","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3706890.3707027","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 5th International Symposium on Artificial Intelligence for Medicine Science","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052750681","display_name":"Zhaolong He","orcid":"https://orcid.org/0009-0003-8674-6857"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhaolong He","raw_affiliation_strings":["Wuhan University of Science and Technology, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0009-0003-8674-6857","affiliations":[{"raw_affiliation_string":"Wuhan University of Science and Technology, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I43922553"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shiqiang Xu","orcid":"https://orcid.org/0009-0001-5067-9627"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shiqiang Xu","raw_affiliation_strings":["Wuhan University of Science and Technology, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0009-0001-5067-9627","affiliations":[{"raw_affiliation_string":"Wuhan University of Science and Technology, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I43922553"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100423114","display_name":"Xia Chen","orcid":"https://orcid.org/0000-0002-6163-3640"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xia Chen","raw_affiliation_strings":["Wuhan University of Science and Technology, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0000-0002-6163-3640","affiliations":[{"raw_affiliation_string":"Wuhan University of Science and Technology, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I43922553"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Haoran Jia","orcid":"https://orcid.org/0009-0008-8048-4362"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haoran Jia","raw_affiliation_strings":["Wuhan University of Science and Technology, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0009-0008-8048-4362","affiliations":[{"raw_affiliation_string":"Wuhan University of Science and Technology, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I43922553"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Min Wu","orcid":"https://orcid.org/0009-0007-9092-9313"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Wu","raw_affiliation_strings":["Wuhan University of Science and Technology, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0009-0007-9092-9313","affiliations":[{"raw_affiliation_string":"Wuhan University of Science and Technology, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I43922553"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Wenhao Zhao","orcid":"https://orcid.org/0009-0002-5308-1740"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenhao Zhao","raw_affiliation_strings":["Wuhan University of Science and Technology, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0009-0002-5308-1740","affiliations":[{"raw_affiliation_string":"Wuhan University of Science and Technology, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I43922553"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111359972","display_name":"Wen Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wen Hu","raw_affiliation_strings":["Wuhan University of Science and Technology, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0009-0008-8942-6652","affiliations":[{"raw_affiliation_string":"Wuhan University of Science and Technology, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I43922553"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5052750681"],"corresponding_institution_ids":["https://openalex.org/I43922553"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.24498923,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"800","last_page":"807"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12059","display_name":"Berberine and alkaloids research","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12059","display_name":"Berberine and alkaloids research","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9801999926567078,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13095","display_name":"Plant-based Medicinal Research","score":0.9722999930381775,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.4885009527206421},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.4680590033531189},{"id":"https://openalex.org/keywords/parkinsons-disease","display_name":"Parkinson's disease","score":0.4358672797679901},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.4096342623233795},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37656670808792114},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.36852556467056274},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.36848628520965576},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3210963010787964},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2474052608013153},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22371360659599304},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.15698835253715515}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.4885009527206421},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.4680590033531189},{"id":"https://openalex.org/C2779734285","wikidata":"https://www.wikidata.org/wiki/Q11085","display_name":"Parkinson's disease","level":3,"score":0.4358672797679901},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.4096342623233795},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37656670808792114},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.36852556467056274},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.36848628520965576},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3210963010787964},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2474052608013153},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22371360659599304},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.15698835253715515},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3706890.3707027","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3706890.3707027","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 5th International Symposium on Artificial Intelligence for Medicine Science","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W630675343","https://openalex.org/W1996239200","https://openalex.org/W2005587581","https://openalex.org/W2023239790","https://openalex.org/W2033591223","https://openalex.org/W2073875274","https://openalex.org/W2741304037","https://openalex.org/W2790863554","https://openalex.org/W2807782219","https://openalex.org/W2917075888","https://openalex.org/W3000298460","https://openalex.org/W3026308571","https://openalex.org/W3042580583","https://openalex.org/W3098237024","https://openalex.org/W3117520723","https://openalex.org/W3154237080","https://openalex.org/W3159073964","https://openalex.org/W3205978403","https://openalex.org/W4223942559","https://openalex.org/W4224251003","https://openalex.org/W4290861512","https://openalex.org/W4295753421","https://openalex.org/W4321003424","https://openalex.org/W4377693025","https://openalex.org/W4383742627","https://openalex.org/W4387189384","https://openalex.org/W4388109016","https://openalex.org/W4391353823"],"related_works":["https://openalex.org/W4312103688","https://openalex.org/W2229271988","https://openalex.org/W2047838177","https://openalex.org/W2575434942","https://openalex.org/W438207291","https://openalex.org/W2329052364","https://openalex.org/W3134596587","https://openalex.org/W3216329096","https://openalex.org/W2416973532","https://openalex.org/W3116665257"],"abstract_inverted_index":{"Network":[0],"pharmacology":[1],"was":[2,91,102,231],"used":[3],"in":[4,19,185],"this":[5],"research":[6,145],"to":[7,213,233],"explore":[8],"the":[9,39,106,115,122,127,167,182,224,235,238,249,261,284],"pharmacological":[10],"basis":[11,272],"and":[12,33,67,75,78,121,140,158,170,199,215],"mechanism":[13,285],"of":[14,26,44,47,226,237,286,288],"Phellodendri":[15],"amurensis":[16],"cortex":[17],"(PAC)":[18],"treating":[20,274],"Parkinson's":[21],"disease":[22],"(PD).":[23],"A":[24,42,88,97],"total":[25,43],"32":[27],"active":[28,48,61,183,242],"compounds":[29,49,62,184,243,254],"with":[30,126,153,248,252,276],"OB":[31],"\u226530%":[32],"DL":[34],"\u22650.18":[35],"were":[36,50,58,70,83,112,131,163,173],"screened":[37,71],"from":[38,60,223],"TCMSP":[40],"database.":[41,108],"610":[45],"targets":[46,63,69,82,149,207],"predicted":[51],"by":[52,72,85,104,165,190],"Swiss":[53],"Target":[54],"Prediction.":[55],"Gene":[56],"names":[57],"derived":[59],"using":[64,73,93,114],"UniProt.":[65],"PD":[66,154,189,275],"inflammation-related":[68],"GeneCards":[74],"DisGeNET":[76],"databases,":[77],"103":[79],"PAC-PD-inflammation":[80],"common":[81],"obtained":[84],"Venny2.1.0":[86],"tool.":[87],"drug-compounds-targets":[89],"network":[90,101],"constructed":[92],"Cytoscape":[94,116],"3.9.1":[95],"software.":[96],"protein-protein":[98],"interactions":[99],"(PPI)":[100],"established":[103],"utilizing":[105,166],"STRING":[107],"The":[109],"PPI":[110],"data":[111],"processed":[113],"tool":[117],"plugin":[118],"CentiScape":[119],"2.2,":[120],"top":[123],"five":[124,148],"proteins":[125],"highest":[128],"degree":[129],"values":[130],"selected":[132],"as":[133,194],"core":[134,250],"targets:":[135],"AKT1,":[136],"TNF,":[137],"Caspase-3,":[138],"MAPK3,":[139],"HSP90AA1.":[141],"Based":[142],"on":[143,210],"clinical":[144],"findings,":[146],"these":[147,204],"are":[150],"highly":[151],"correlated":[152],"or":[155],"inflammation.":[156],"GO":[157,177],"KEGG":[159,201],"pathway":[160],"enrichment":[161,178],"analysis":[162,179],"conducted":[164],"DAVID":[168],"database,":[169],"bubble":[171],"plots":[172],"generated":[174],"for":[175,273,291],"visualization.":[176],"indicated":[180],"that":[181,203],"PAC":[186],"may":[187],"treat":[188],"affecting":[191],"processes":[192],"such":[193],"protein-specific":[195],"aggregation,":[196],"transmembrane":[197],"transport,":[198],"degradation.":[200],"showed":[202,244],"intersectional":[205],"gene":[206],"mainly":[208],"act":[209],"pathways":[211],"related":[212],"hormones":[214],"energy":[216,227],"metabolism,":[217],"it":[218],"could":[219],"be":[220],"further":[221,292],"studied":[222],"perspective":[225],"metabolism.":[228],"Molecular":[229],"docking":[230],"employed":[232],"confirm":[234],"stability":[236],"ligand-protein":[239],"interaction.":[240],"All":[241],"good":[245],"binding":[246,258],"affinity":[247],"targets,":[251],"some":[253],"exhibiting":[255],"even":[256],"stronger":[257],"activity":[259],"than":[260],"original":[262],"co-crystallized":[263],"ligand.":[264],"This":[265],"study":[266],"not":[267],"only":[268],"provided":[269],"a":[270],"theoretical":[271],"PAC,":[277],"but":[278],"also":[279],"offered":[280],"valuable":[281],"insights":[282],"into":[283],"action":[287],"herbal":[289],"extracts":[290],"research.":[293]},"counts_by_year":[],"updated_date":"2025-12-27T23:08:20.325037","created_date":"2025-10-10T00:00:00"}
