{"id":"https://openalex.org/W3197534805","doi":"https://doi.org/10.1145/3451421.3451434","title":"A New Microorganism Dataset for Image Segmentation and Classification Evaluation","display_name":"A New Microorganism Dataset for Image Segmentation and Classification Evaluation","publication_year":2020,"publication_date":"2020-12-05","ids":{"openalex":"https://openalex.org/W3197534805","doi":"https://doi.org/10.1145/3451421.3451434","mag":"3197534805"},"language":"en","primary_location":{"id":"doi:10.1145/3451421.3451434","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3451421.3451434","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Fourth International Symposium on Image Computing and Digital Medicine","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100672507","display_name":"Zihan Li","orcid":"https://orcid.org/0000-0001-5082-9560"},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zihan Li","raw_affiliation_strings":["Northeastern University, PR China"],"affiliations":[{"raw_affiliation_string":"Northeastern University, PR China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100369916","display_name":"Chen Li","orcid":"https://orcid.org/0000-0003-1545-8885"},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chen Li","raw_affiliation_strings":["Northeastern University, China"],"affiliations":[{"raw_affiliation_string":"Northeastern University, China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064208724","display_name":"Jinghua Zhang","orcid":"https://orcid.org/0000-0003-3303-4752"},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinghua Zhang","raw_affiliation_strings":["Northeastern University, PR China"],"affiliations":[{"raw_affiliation_string":"Northeastern University, PR China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101830017","display_name":"Hao Xu","orcid":"https://orcid.org/0000-0001-6062-9490"},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Xu","raw_affiliation_strings":["Northeastern University, PR China"],"affiliations":[{"raw_affiliation_string":"Northeastern University, PR China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101133851","display_name":"Yuan Huaqian","orcid":null},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huaqian Yuan","raw_affiliation_strings":["Northeastern University, PR China"],"affiliations":[{"raw_affiliation_string":"Northeastern University, PR China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074678804","display_name":"Xuemin Zhu","orcid":null},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xuemin Zhu","raw_affiliation_strings":["Johns Hopkins University, US"],"affiliations":[{"raw_affiliation_string":"Johns Hopkins University, US","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062227243","display_name":"Bolin Lu","orcid":"https://orcid.org/0000-0002-9622-0627"},"institutions":[{"id":"https://openalex.org/I4210157617","display_name":"Huazhong University of Science and Technology Hospital","ror":"https://ror.org/05f9vfg11","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210157617"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bolin Lu","raw_affiliation_strings":["Huazhong Science and Technology University, PR China"],"affiliations":[{"raw_affiliation_string":"Huazhong Science and Technology University, PR China","institution_ids":["https://openalex.org/I4210157617"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5100672507"],"corresponding_institution_ids":["https://openalex.org/I9224756"],"apc_list":null,"apc_paid":null,"fwci":0.2078,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.74047754,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"53","last_page":"58"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12282","display_name":"Mineral Processing and Grinding","score":0.9836999773979187,"subfield":{"id":"https://openalex.org/subfields/2210","display_name":"Mechanical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.8223928809165955},{"id":"https://openalex.org/keywords/image-texture","display_name":"Image texture","score":0.7172192931175232},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.696670413017273},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6586102843284607},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.6339497566223145},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6144326329231262},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.6032310724258423},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.5359756350517273},{"id":"https://openalex.org/keywords/segmentation-based-object-categorization","display_name":"Segmentation-based object categorization","score":0.5302994251251221},{"id":"https://openalex.org/keywords/standard-test-image","display_name":"Standard test image","score":0.5138912200927734},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.49773314595222473},{"id":"https://openalex.org/keywords/automatic-image-annotation","display_name":"Automatic image annotation","score":0.46289530396461487},{"id":"https://openalex.org/keywords/feature-detection","display_name":"Feature detection (computer vision)","score":0.4572458267211914},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.44707009196281433},{"id":"https://openalex.org/keywords/contextual-image-classification","display_name":"Contextual image classification","score":0.43434250354766846},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.42755404114723206},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4170481860637665},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.26865822076797485}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.8223928809165955},{"id":"https://openalex.org/C63099799","wikidata":"https://www.wikidata.org/wiki/Q17147001","display_name":"Image texture","level":4,"score":0.7172192931175232},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.696670413017273},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6586102843284607},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.6339497566223145},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6144326329231262},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.6032310724258423},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.5359756350517273},{"id":"https://openalex.org/C25694479","wikidata":"https://www.wikidata.org/wiki/Q7446278","display_name":"Segmentation-based object categorization","level":5,"score":0.5302994251251221},{"id":"https://openalex.org/C180462255","wikidata":"https://www.wikidata.org/wiki/Q3559736","display_name":"Standard test image","level":4,"score":0.5138912200927734},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.49773314595222473},{"id":"https://openalex.org/C199579030","wikidata":"https://www.wikidata.org/wiki/Q2851778","display_name":"Automatic image annotation","level":4,"score":0.46289530396461487},{"id":"https://openalex.org/C126422989","wikidata":"https://www.wikidata.org/wiki/Q93586","display_name":"Feature detection (computer vision)","level":4,"score":0.4572458267211914},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.44707009196281433},{"id":"https://openalex.org/C75294576","wikidata":"https://www.wikidata.org/wiki/Q5165192","display_name":"Contextual image classification","level":3,"score":0.43434250354766846},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.42755404114723206},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4170481860637665},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.26865822076797485},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3451421.3451434","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3451421.3451434","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Fourth International Symposium on Image Computing and Digital Medicine","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6299999952316284,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1909740415","https://openalex.org/W1972544340","https://openalex.org/W2006398333","https://openalex.org/W2015491622","https://openalex.org/W2021716602","https://openalex.org/W2079914758","https://openalex.org/W2133665775","https://openalex.org/W2295506001","https://openalex.org/W2500525714","https://openalex.org/W2505569584","https://openalex.org/W2516755345","https://openalex.org/W2782019225","https://openalex.org/W3010421324","https://openalex.org/W4206069814","https://openalex.org/W4252771080","https://openalex.org/W4253920039","https://openalex.org/W4285245313","https://openalex.org/W6604428989"],"related_works":["https://openalex.org/W2117171064","https://openalex.org/W1987618107","https://openalex.org/W813493277","https://openalex.org/W3017192027","https://openalex.org/W2183434644","https://openalex.org/W2104658187","https://openalex.org/W2731517839","https://openalex.org/W2761229199","https://openalex.org/W2493967237","https://openalex.org/W1551221066"],"abstract_inverted_index":{"Environmental":[0,14],"Microorganism":[1,15],"Data":[2],"Set":[3],"Fifth":[4],"Version":[5],"(EMDS-5)":[6],"is":[7],"a":[8,31,37],"microscopic":[9],"image":[10,28,34,40,72,74,78,81,98,104,107,114,118,141],"dataset":[11,44],"including":[12],"original":[13,55],"(EM)":[16],"images":[17,61,126],"and":[18,36,62,80,90,95,106,116,129,162],"two":[19,102,154],"sets":[20,29],"of":[21,48,51,140,156],"Ground":[22],"Truth":[23],"(GT)":[24],"images.":[25,66],"The":[26,42,97],"GT":[27,33,39,60,65],"include":[30],"single-object":[32,59,113],"set":[35],"multi-object":[38,64,117],"set.":[41],"EMDS-5":[43,67,128],"has":[45],"21":[46],"types":[47,155],"EMs,":[49],"each":[50],"which":[52],"contains":[53],"20":[54,58,63],"EM":[56],"images,":[57],"can":[68],"realize":[69],"to":[70,148],"evaluate":[71],"preprocessing,":[73],"segmentation,":[75],"feature":[76,147,160,165],"extraction,":[77],"classification":[79],"retrieval":[82,157,161],"functions.":[83],"We":[84,120,152],"select":[85,144],"the":[86,125,131,145],"most":[87],"representative":[88],"algorithms":[89],"price":[91],"indicators":[92],"for":[93,136],"testing":[94],"evaluation.":[96],"preprocessing":[99],"functions":[100],"contain":[101],"parts:":[103],"denoising":[105],"edge":[108],"detection.":[109],"Image":[110],"segmentation":[111,115],"includes":[112],"segmentation.":[119],"extract":[121],"nine":[122],"features":[123],"from":[124],"in":[127],"use":[130],"Support":[132],"Vector":[133],"Machine":[134],"classifier":[135],"testing.":[137],"In":[138],"terms":[139],"classification,":[142],"we":[143],"VGG16":[146],"test":[149,153],"different":[150],"classifiers.":[151],"approaches:":[158],"texture":[159],"deep":[163],"learning":[164],"retrieval.":[166]},"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
