{"id":"https://openalex.org/W3102979309","doi":"https://doi.org/10.1145/3388440.3412461","title":"Fusion Lasso and Its Applications to Cancer Subtype and Stage Prediction","display_name":"Fusion Lasso and Its Applications to Cancer Subtype and Stage Prediction","publication_year":2020,"publication_date":"2020-09-21","ids":{"openalex":"https://openalex.org/W3102979309","doi":"https://doi.org/10.1145/3388440.3412461","mag":"3102979309"},"language":"en","primary_location":{"id":"doi:10.1145/3388440.3412461","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3388440.3412461","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100430415","display_name":"Zhong Chen","orcid":"https://orcid.org/0000-0002-7483-9699"},"institutions":[{"id":"https://openalex.org/I169251466","display_name":"Xavier University of Louisiana","ror":"https://ror.org/0085d9t86","country_code":"US","type":"education","lineage":["https://openalex.org/I169251466"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Zhong Chen","raw_affiliation_strings":["Department of Computer Science, Xavier University of Louisiana, New Orleans, Louisiana"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Xavier University of Louisiana, New Orleans, Louisiana","institution_ids":["https://openalex.org/I169251466"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007856773","display_name":"Andrea Edwards","orcid":"https://orcid.org/0000-0001-9780-7908"},"institutions":[{"id":"https://openalex.org/I169251466","display_name":"Xavier University of Louisiana","ror":"https://ror.org/0085d9t86","country_code":"US","type":"education","lineage":["https://openalex.org/I169251466"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrea Edwards","raw_affiliation_strings":["Department of Computer Science, Xavier University of Louisiana, New Orleans, Louisiana"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Xavier University of Louisiana, New Orleans, Louisiana","institution_ids":["https://openalex.org/I169251466"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100342324","display_name":"Kun Zhang","orcid":"https://orcid.org/0000-0002-1915-788X"},"institutions":[{"id":"https://openalex.org/I169251466","display_name":"Xavier University of Louisiana","ror":"https://ror.org/0085d9t86","country_code":"US","type":"education","lineage":["https://openalex.org/I169251466"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kun Zhang","raw_affiliation_strings":["Department of Computer Science, Xavier University of Louisiana, New Orleans, Louisiana"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Xavier University of Louisiana, New Orleans, Louisiana","institution_ids":["https://openalex.org/I169251466"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100430415"],"corresponding_institution_ids":["https://openalex.org/I169251466"],"apc_list":null,"apc_paid":null,"fwci":0.1657,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.50621146,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.7635507583618164},{"id":"https://openalex.org/keywords/lasso","display_name":"Lasso (programming language)","score":0.7251615524291992},{"id":"https://openalex.org/keywords/elastic-net-regularization","display_name":"Elastic net regularization","score":0.6743403673171997},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.6720965504646301},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6568302512168884},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.6267008781433105},{"id":"https://openalex.org/keywords/regularization","display_name":"Regularization (linguistics)","score":0.4814164340496063},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4760553538799286},{"id":"https://openalex.org/keywords/stability","display_name":"Stability (learning theory)","score":0.44816163182258606},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4390508234500885},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.4329805076122284},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.43061167001724243},{"id":"https://openalex.org/keywords/sensor-fusion","display_name":"Sensor fusion","score":0.42568591237068176},{"id":"https://openalex.org/keywords/optimization-problem","display_name":"Optimization problem","score":0.4207037091255188},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3993208706378937},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.30243033170700073}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.7635507583618164},{"id":"https://openalex.org/C37616216","wikidata":"https://www.wikidata.org/wiki/Q3218363","display_name":"Lasso (programming language)","level":2,"score":0.7251615524291992},{"id":"https://openalex.org/C203868755","wikidata":"https://www.wikidata.org/wiki/Q5353562","display_name":"Elastic net regularization","level":3,"score":0.6743403673171997},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.6720965504646301},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6568302512168884},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.6267008781433105},{"id":"https://openalex.org/C2776135515","wikidata":"https://www.wikidata.org/wiki/Q17143721","display_name":"Regularization (linguistics)","level":2,"score":0.4814164340496063},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4760553538799286},{"id":"https://openalex.org/C112972136","wikidata":"https://www.wikidata.org/wiki/Q7595718","display_name":"Stability (learning theory)","level":2,"score":0.44816163182258606},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4390508234500885},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.4329805076122284},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.43061167001724243},{"id":"https://openalex.org/C33954974","wikidata":"https://www.wikidata.org/wiki/Q486494","display_name":"Sensor fusion","level":2,"score":0.42568591237068176},{"id":"https://openalex.org/C137836250","wikidata":"https://www.wikidata.org/wiki/Q984063","display_name":"Optimization problem","level":2,"score":0.4207037091255188},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3993208706378937},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.30243033170700073},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3388440.3412461","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3388440.3412461","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1486076789","display_name":null,"funder_award_id":"W911NF-20-1-0249","funder_id":"https://openalex.org/F4320306078","funder_display_name":"U.S. Department of Defense"},{"id":"https://openalex.org/G2093646433","display_name":null,"funder_award_id":"2U54MD007595, 5P20GM103424, and 5U19AG055373","funder_id":"https://openalex.org/F4320337373","funder_display_name":"Center for Information Technology"}],"funders":[{"id":"https://openalex.org/F4320306078","display_name":"U.S. Department of Defense","ror":"https://ror.org/0447fe631"},{"id":"https://openalex.org/F4320337373","display_name":"Center for Information Technology","ror":"https://ror.org/03jh5a977"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W398859631","https://openalex.org/W1497748561","https://openalex.org/W1548779692","https://openalex.org/W1967827763","https://openalex.org/W1989060270","https://openalex.org/W1993841573","https://openalex.org/W2001502878","https://openalex.org/W2008929650","https://openalex.org/W2020461703","https://openalex.org/W2026254555","https://openalex.org/W2030161963","https://openalex.org/W2045156863","https://openalex.org/W2065914817","https://openalex.org/W2071103442","https://openalex.org/W2076261573","https://openalex.org/W2079210771","https://openalex.org/W2104915027","https://openalex.org/W2105351532","https://openalex.org/W2105693192","https://openalex.org/W2109743529","https://openalex.org/W2111854888","https://openalex.org/W2122825543","https://openalex.org/W2123111158","https://openalex.org/W2135046866","https://openalex.org/W2141599838","https://openalex.org/W2142674578","https://openalex.org/W2144903813","https://openalex.org/W2158485828","https://openalex.org/W2169585110","https://openalex.org/W2209688796","https://openalex.org/W2389178838","https://openalex.org/W2398500126","https://openalex.org/W2406965650","https://openalex.org/W2535300095","https://openalex.org/W2567080747","https://openalex.org/W2808573647","https://openalex.org/W2889270078","https://openalex.org/W2950602671","https://openalex.org/W2962853966","https://openalex.org/W2963161367","https://openalex.org/W3098595037","https://openalex.org/W3101782091","https://openalex.org/W4252676770","https://openalex.org/W6681437887"],"related_works":["https://openalex.org/W2468272465","https://openalex.org/W2429564919","https://openalex.org/W757986597","https://openalex.org/W4212910148","https://openalex.org/W4213314600","https://openalex.org/W4210804200","https://openalex.org/W4399551893","https://openalex.org/W2954774635","https://openalex.org/W4392841950","https://openalex.org/W4285814086"],"abstract_inverted_index":{"Effectively":[0],"integrating":[1],"and":[2,33,48,67,87,120,163,174,187,195],"mining":[3],"multi-view,":[4],"high-dimensional":[5],"omics":[6],"data":[7,68,107,164,203],"is":[8,185,205],"instrumental":[9],"to":[10,36,125,131,143,192],"precision":[11],"medicine.":[12],"Numerous":[13],"methods":[14],"have":[15],"been":[16],"proposed":[17,183],"for":[18],"addressing":[19],"this":[20,37,53,127],"problem.":[21,77],"However,":[22],"they":[23],"more":[24],"or":[25,44],"less":[26],"neglect":[27],"the":[28,95,113,118],"challenges":[29],"(e.g.,":[30],"interpretability,":[31],"stability":[32],"consistency)":[34],"pertaining":[35],"integration":[38,69,165,204],"process,":[39],"whereby":[40],"suffering":[41],"from":[42,106],"unstable":[43],"inconsistent":[45],"variable":[46,65,161],"selection":[47,66,162],"prediction":[49],"accuracy":[50],"deterioration.":[51],"In":[52],"paper,":[54],"we":[55,155],"introduce":[56],"a":[57,73,132,206],"novel":[58],"Fusion":[59],"Lasso":[60],"(FL)":[61],"framework":[62],"in":[63,94,176],"which":[64],"are":[70,89,104],"formulated":[71],"as":[72,168],"weighted":[74],"constrained":[75],"optimization":[76,128],"Specifically,":[78],"four":[79],"regularization":[80],"constraints,":[81],"i.e.,":[82],"sparsity,":[83],"fusion":[84,96],"penalty,":[85],"instability":[86],"inconsistency,":[88],"simultaneously":[90],"taken":[91],"into":[92],"account":[93],"model":[97,134],"using":[98],"multi-view":[99,202],"data,":[100],"while":[101],"sparse":[102],"features":[103],"revealed":[105],"of":[108],"each":[109],"individual":[110],"view":[111],"through":[112],"\u21131-norm":[114],"minimization.":[115],"We":[116],"use":[117],"ADMM":[119,122],"Accelerated":[121],"(AADMM)":[123],"schemes":[124],"solve":[126],"problem,":[129],"leading":[130],"scalable":[133],"convergence":[135],"with":[136],"solid":[137],"theoretical":[138],"guarantee.":[139],"By":[140],"applying":[141],"FL":[142,158],"fve":[144],"multi-omics":[145],"cancer":[146,177],"datasets":[147],"collected":[148],"by":[149],"The":[150,182],"Cancer":[151],"Genome":[152],"Atlas":[153],"(TCGA),":[154],"demonstrate":[156],"that":[157],"outperforms":[159],"popular":[160],"approaches,":[166],"such":[167],"Elastic":[169],"Net,":[170],"Precision":[171],"Lasso,":[172],"B-RAIL":[173],"MDBN,":[175],"subtype":[178],"and/or":[179],"stage":[180],"prediction.":[181],"method":[184],"useful":[186],"can":[188],"be":[189],"further":[190],"adopted":[191],"systems":[193],"biology":[194],"other":[196],"advanced":[197],"clinical":[198],"research":[199],"areas":[200],"where":[201],"necessity.":[207]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
