{"id":"https://openalex.org/W2750573615","doi":"https://doi.org/10.1145/3107411.3108189","title":"An Advanced Workflow for Metabolite Annotation","display_name":"An Advanced Workflow for Metabolite Annotation","publication_year":2017,"publication_date":"2017-08-20","ids":{"openalex":"https://openalex.org/W2750573615","doi":"https://doi.org/10.1145/3107411.3108189","mag":"2750573615"},"language":"en","primary_location":{"id":"doi:10.1145/3107411.3108189","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3107411.3108189","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085539600","display_name":"Neda Hassanpour","orcid":null},"institutions":[{"id":"https://openalex.org/I121934306","display_name":"Tufts University","ror":"https://ror.org/05wvpxv85","country_code":"US","type":"education","lineage":["https://openalex.org/I121934306"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Neda Hassanpour","raw_affiliation_strings":["Tufts University, Medford, MA, USA"],"affiliations":[{"raw_affiliation_string":"Tufts University, Medford, MA, USA","institution_ids":["https://openalex.org/I121934306"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009788622","display_name":"Nicholas Alden","orcid":null},"institutions":[{"id":"https://openalex.org/I121934306","display_name":"Tufts University","ror":"https://ror.org/05wvpxv85","country_code":"US","type":"education","lineage":["https://openalex.org/I121934306"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nicholas Alden","raw_affiliation_strings":["Tufts University, Medford, MA, USA"],"affiliations":[{"raw_affiliation_string":"Tufts University, Medford, MA, USA","institution_ids":["https://openalex.org/I121934306"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087420269","display_name":"Kyongbum Lee","orcid":"https://orcid.org/0000-0002-0699-8057"},"institutions":[{"id":"https://openalex.org/I121934306","display_name":"Tufts University","ror":"https://ror.org/05wvpxv85","country_code":"US","type":"education","lineage":["https://openalex.org/I121934306"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kyongbum Lee","raw_affiliation_strings":["Tufts University, Medford, MA, USA"],"affiliations":[{"raw_affiliation_string":"Tufts University, Medford, MA, USA","institution_ids":["https://openalex.org/I121934306"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048817284","display_name":"Soha Hassoun","orcid":"https://orcid.org/0000-0001-9477-2199"},"institutions":[{"id":"https://openalex.org/I121934306","display_name":"Tufts University","ror":"https://ror.org/05wvpxv85","country_code":"US","type":"education","lineage":["https://openalex.org/I121934306"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Soha Hassoun","raw_affiliation_strings":["Tufts University, Medford, MA, USA"],"affiliations":[{"raw_affiliation_string":"Tufts University, Medford, MA, USA","institution_ids":["https://openalex.org/I121934306"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5085539600"],"corresponding_institution_ids":["https://openalex.org/I121934306"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.09364746,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"582","last_page":"582"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9564999938011169,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9465000033378601,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.8960508108139038},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8235949873924255},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.65446937084198},{"id":"https://openalex.org/keywords/metabolite","display_name":"Metabolite","score":0.5929039120674133},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5849448442459106},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49383220076560974},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.44737541675567627},{"id":"https://openalex.org/keywords/fragmentation","display_name":"Fragmentation (computing)","score":0.41806408762931824},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3640972077846527},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33864039182662964},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2904245853424072},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1846303641796112},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.13690248131752014},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.0858420729637146}],"concepts":[{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.8960508108139038},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8235949873924255},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.65446937084198},{"id":"https://openalex.org/C2777477808","wikidata":"https://www.wikidata.org/wiki/Q407595","display_name":"Metabolite","level":2,"score":0.5929039120674133},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5849448442459106},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49383220076560974},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.44737541675567627},{"id":"https://openalex.org/C191015642","wikidata":"https://www.wikidata.org/wiki/Q1132459","display_name":"Fragmentation (computing)","level":2,"score":0.41806408762931824},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3640972077846527},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33864039182662964},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2904245853424072},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1846303641796112},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.13690248131752014},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0858420729637146},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3107411.3108189","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3107411.3108189","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.5899999737739563,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G6657478194","display_name":null,"funder_award_id":"1265702","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2521903434","https://openalex.org/W1753739957","https://openalex.org/W2361861616","https://openalex.org/W2085913165","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2011282322","https://openalex.org/W3084209502","https://openalex.org/W1988419672"],"abstract_inverted_index":{"Metabolomics":[0,24],"is":[1,25],"an":[2],"expanding":[3],"field":[4],"of":[5,13,45,72,86,107],"'omics'":[6],"that":[7],"involves":[8],"the":[9,42,56,69,73,84,103],"identification":[10],"and":[11,19,34,54,66,79,105],"quantification":[12],"small":[14],"molecules":[15],"in":[16,40,52,83,92],"cells,":[17],"tissues":[18],"other":[20],"complex":[21],"biological":[22,61],"samples.":[23],"emerging":[26],"as":[27],"a":[28,95],"strong":[29],"tool":[30],"for":[31],"disease":[32],"treatments":[33],"drug":[35],"developments.":[36],"A":[37],"major":[38],"challenge":[39],"realizing":[41],"full":[43],"potential":[44],"metabolomics":[46,97],"to":[47,101],"globally":[48],"characterize":[49],"metabolism":[50],"lies":[51],"processing":[53,99],"analyzing":[55],"collected":[57],"data.":[58],"Obtaining":[59],"meaningful":[60],"information":[62],"depends":[63],"on":[64],"reliably":[65],"efficiently":[67],"resolving":[68],"chemical":[70],"identities":[71],"detected":[74],"data":[75,98],"features":[76],"(unique":[77],"mass":[78,87],"associated":[80],"fragmentation":[81],"spectrum":[82],"case":[85],"spectrometry":[88],"experiments).":[89],"We":[90],"propose":[91],"this":[93],"poster":[94],"novel":[96],"workflow":[100],"enhance":[102],"accuracy":[104],"performance":[106],"metabolite":[108],"identification.":[109]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
