{"id":"https://openalex.org/W2612101876","doi":"https://doi.org/10.1145/3041021.3058587","title":"Circularized Visualisation of Genetic Interactions","display_name":"Circularized Visualisation of Genetic Interactions","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2612101876","doi":"https://doi.org/10.1145/3041021.3058587","mag":"2612101876"},"language":"en","primary_location":{"id":"doi:10.1145/3041021.3058587","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3041021.3058587","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 26th International Conference on World Wide Web Companion - WWW '17 Companion","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1145/3041021.3058587","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101987348","display_name":"Irina Kuznetsova","orcid":"https://orcid.org/0000-0003-1235-0879"},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":true,"raw_author_name":"Irina Kuznetsova","raw_affiliation_strings":["Graz University of Technology, Graz, Graz , Austria"],"affiliations":[{"raw_affiliation_string":"Graz University of Technology, Graz, Graz , Austria","institution_ids":["https://openalex.org/I4092182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050949179","display_name":"Aleksandra Filipovska","orcid":"https://orcid.org/0000-0002-6998-8403"},"institutions":[{"id":"https://openalex.org/I177877127","display_name":"University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Aleksandra Filipovska","raw_affiliation_strings":["The University of Western Australia, Perth, Australia"],"affiliations":[{"raw_affiliation_string":"The University of Western Australia, Perth, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070261696","display_name":"Oliver Rackham","orcid":"https://orcid.org/0000-0002-5301-9624"},"institutions":[{"id":"https://openalex.org/I177877127","display_name":"University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Oliver Rackham","raw_affiliation_strings":["The University of Western Australia, Perth, Australia"],"affiliations":[{"raw_affiliation_string":"The University of Western Australia, Perth, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020372476","display_name":"Artur Lugmayr","orcid":"https://orcid.org/0000-0001-6994-4470"},"institutions":[{"id":"https://openalex.org/I205640436","display_name":"Curtin University","ror":"https://ror.org/02n415q13","country_code":"AU","type":"education","lineage":["https://openalex.org/I205640436"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Artur Lugmayr","raw_affiliation_strings":["Curtin University, Perth, Australia"],"affiliations":[{"raw_affiliation_string":"Curtin University, Perth, Australia","institution_ids":["https://openalex.org/I205640436"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034657358","display_name":"Andreas Holzinger","orcid":"https://orcid.org/0000-0002-6786-5194"},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Andreas Holzinger","raw_affiliation_strings":["Graz University of Technology, Graz, Austria"],"affiliations":[{"raw_affiliation_string":"Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101987348"],"corresponding_institution_ids":["https://openalex.org/I4092182"],"apc_list":null,"apc_paid":null,"fwci":0.1123,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.49798856,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"225","last_page":"226"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.8570656776428223},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7871655821800232},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6546950936317444},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.6096169948577881},{"id":"https://openalex.org/keywords/interpretation","display_name":"Interpretation (philosophy)","score":0.5390332341194153},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5365265607833862},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5234353542327881},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.515403151512146},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4974665939807892},{"id":"https://openalex.org/keywords/software-visualization","display_name":"Software visualization","score":0.4302036762237549},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.43007394671440125},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.4144657552242279},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37251144647598267},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3610795736312866},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.31628182530403137},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23622822761535645},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.22710001468658447},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1533004343509674},{"id":"https://openalex.org/keywords/software-development","display_name":"Software development","score":0.14092740416526794},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08055293560028076},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.06892549991607666}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.8570656776428223},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7871655821800232},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6546950936317444},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.6096169948577881},{"id":"https://openalex.org/C527412718","wikidata":"https://www.wikidata.org/wiki/Q855395","display_name":"Interpretation (philosophy)","level":2,"score":0.5390332341194153},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5365265607833862},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5234353542327881},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.515403151512146},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4974665939807892},{"id":"https://openalex.org/C4379982","wikidata":"https://www.wikidata.org/wiki/Q1273511","display_name":"Software visualization","level":5,"score":0.4302036762237549},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.43007394671440125},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.4144657552242279},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37251144647598267},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3610795736312866},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.31628182530403137},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23622822761535645},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.22710001468658447},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1533004343509674},{"id":"https://openalex.org/C529173508","wikidata":"https://www.wikidata.org/wiki/Q638608","display_name":"Software development","level":3,"score":0.14092740416526794},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08055293560028076},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.06892549991607666},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0},{"id":"https://openalex.org/C186846655","wikidata":"https://www.wikidata.org/wiki/Q3398377","display_name":"Software construction","level":4,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1145/3041021.3058587","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3041021.3058587","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 26th International Conference on World Wide Web Companion - WWW '17 Companion","raw_type":"proceedings-article"},{"id":"pmh:oai:pure.atira.dk:openaire/164e4647-eb1c-403a-9103-b506dc2903e6","is_oa":true,"landing_page_url":"https://admin.research-repository.uwa.edu.au/en/publications/164e4647-eb1c-403a-9103-b506dc2903e6","pdf_url":null,"source":{"id":"https://openalex.org/S4306402523","display_name":"UWA Profiles and Research Repository (University of Western Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177877127","host_organization_name":"The University of Western Australia","host_organization_lineage":["https://openalex.org/I177877127"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Kuznetsova, I, Lugmayr, A, Filipovska, A, Holzinger, A & Rackham, O 2017, Circularized visualisation of genetic interactions. in Proceedings of the 26th International Conference on World Wide Web Companion. 26th International World Wide Web Conference 2017, WWW 2017 Companion, International World Wide Web Conferences Steering Committee, pp. 225-226, 26th International World Wide Web Conference, WWW 2017 Companion, Perth, Australia, 3/04/17. https://doi.org/10.1145/3041021.3058587","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pure.atira.dk:publications/164e4647-eb1c-403a-9103-b506dc2903e6","is_oa":true,"landing_page_url":"https://research-repository.uwa.edu.au/en/publications/164e4647-eb1c-403a-9103-b506dc2903e6","pdf_url":null,"source":{"id":"https://openalex.org/S4306402492","display_name":"UWA Profiles and Research Repository (UWA)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177877127","host_organization_name":"The University of Western Australia","host_organization_lineage":["https://openalex.org/I177877127"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Kuznetsova , I , Lugmayr , A , Filipovska , A , Holzinger , A &amp; Rackham , O 2017 , Circularized visualisation of genetic interactions . in Proceedings of the 26th International Conference on World Wide Web Companion . 26th International World Wide Web Conference 2017, WWW 2017 Companion , International World Wide Web Conferences Steering Committee , pp. 225-226 , 26th International World Wide Web Conference, WWW 2017 Companion , Perth , Australia , 3/04/17 . https://doi.org/10.1145/3041021.3058587","raw_type":"contributionToPeriodical"},{"id":"pmh:oai:espace.curtin.edu.au:20.500.11937/69082","is_oa":false,"landing_page_url":"http://hdl.handle.net/20.500.11937/69082","pdf_url":null,"source":{"id":"https://openalex.org/S4306401790","display_name":"eSpace (Curtin University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205640436","host_organization_name":"Curtin University","host_organization_lineage":["https://openalex.org/I205640436"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference Paper"}],"best_oa_location":{"id":"doi:10.1145/3041021.3058587","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3041021.3058587","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 26th International Conference on World Wide Web Companion - WWW '17 Companion","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W2036897871","https://openalex.org/W2105349784","https://openalex.org/W2108234281","https://openalex.org/W2112814753","https://openalex.org/W2138664009","https://openalex.org/W2157107905","https://openalex.org/W2158804744","https://openalex.org/W2160467221","https://openalex.org/W2170551349","https://openalex.org/W2562878668","https://openalex.org/W2588409198","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W188202134","https://openalex.org/W4293280164","https://openalex.org/W1484449898","https://openalex.org/W171991278","https://openalex.org/W2058045376","https://openalex.org/W2889493020"],"abstract_inverted_index":{"Next":[0],"Generation":[1],"Sequencing":[2],"(NGS)":[3],"has":[4,63],"been":[5],"a":[6,37,43],"powerful":[7],"tool":[8],"to":[9,39,47],"investigate":[10,48],"gene":[11,49],"networks":[12],"in":[13],"biological":[14,32,65],"sciences":[15],"[1].":[16],"Visualisation":[17,59],"of":[18,28,60,70,76],"data":[19,73],"produced":[20],"by":[21,31],"NGS":[22,44],"is":[23],"essential":[24],"for":[25],"the":[26,29],"interpretation":[27,69],"findings":[30,41],"scientists.":[33],"Here":[34],"we":[35],"describe":[36],"workflow":[38],"image":[40],"from":[42],"sequencing":[45],"methodology":[46],"expression":[50],"that":[51],"can":[52],"be":[53],"visualised":[54],"with":[55,67],"Circus":[56],"software":[57],"[2].":[58],"these":[61],"processes":[62],"provided":[64],"scientists":[66],"valuable":[68],"high":[71],"throughput":[72],"and":[74],"identification":[75],"new":[77],"transcripts.":[78]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
