{"id":"https://openalex.org/W2119218661","doi":"https://doi.org/10.1145/2517208.2517229","title":"Modeling biology with solver-aided programming languages","display_name":"Modeling biology with solver-aided programming languages","publication_year":2013,"publication_date":"2013-10-23","ids":{"openalex":"https://openalex.org/W2119218661","doi":"https://doi.org/10.1145/2517208.2517229","mag":"2119218661"},"language":"en","primary_location":{"id":"doi:10.1145/2517208.2517229","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2517208.2517229","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 12th international conference on Generative programming: concepts &amp; experiences","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085160432","display_name":"Rastislav Bod\u00edk","orcid":"https://orcid.org/0000-0001-6639-1647"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rastislav Bodik","raw_affiliation_strings":["University of California Berkeley, Berkeley, CA, USA","University of California, Berkeley, Berkeley, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"University of California, Berkeley, Berkeley, CA USA","institution_ids":["https://openalex.org/I95457486"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5085160432"],"corresponding_institution_ids":["https://openalex.org/I95457486"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19677183,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.7258999943733215,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.7258999943733215,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.6887999773025513,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7503716945648193},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.6011239290237427},{"id":"https://openalex.org/keywords/solver","display_name":"Solver","score":0.5431321263313293},{"id":"https://openalex.org/keywords/programming-paradigm","display_name":"Programming paradigm","score":0.4791135787963867},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4233267307281494}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7503716945648193},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.6011239290237427},{"id":"https://openalex.org/C2778770139","wikidata":"https://www.wikidata.org/wiki/Q1966904","display_name":"Solver","level":2,"score":0.5431321263313293},{"id":"https://openalex.org/C34165917","wikidata":"https://www.wikidata.org/wiki/Q188267","display_name":"Programming paradigm","level":2,"score":0.4791135787963867},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4233267307281494}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2517208.2517229","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2517208.2517229","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 12th international conference on Generative programming: concepts &amp; experiences","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.4699999988079071,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2186864281","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W4255427455"],"abstract_inverted_index":{"A":[0],"good":[1],"model":[2,32],"of":[3,9,58],"a":[4,24,34,43,51],"biological":[5],"cell":[6,60],"exposes":[7],"secrets":[8],"the":[10,31,39,59],"cell's":[11],"signaling":[12],"mechanisms,":[13],"explaining":[14],"diseases":[15],"and":[16,41],"facilitating":[17],"drug":[18],"discovery.":[19],"Modeling":[20],"cells":[21],"is":[22,33,47],"fundamentally":[23],"programming":[25,29],"problem":[26,44],"-":[27],"it's":[28,42],"because":[30,45],"concurrent":[35],"program":[36,52],"that":[37,53],"simulates":[38],"cell,":[40],"it":[46],"hard":[48],"to":[49],"write":[50],"reproduces":[54],"all":[55],"experimental":[56],"observations":[57],"faithfully.":[61]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
