{"id":"https://openalex.org/W2041529680","doi":"https://doi.org/10.1145/2484762.2484790","title":"National Center for Genome Analysis support leverages XSEDE to support life science research","display_name":"National Center for Genome Analysis support leverages XSEDE to support life science research","publication_year":2013,"publication_date":"2013-07-22","ids":{"openalex":"https://openalex.org/W2041529680","doi":"https://doi.org/10.1145/2484762.2484790","mag":"2041529680"},"language":"en","primary_location":{"id":"doi:10.1145/2484762.2484790","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2484762.2484790","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Conference on Extreme Science and Engineering Discovery Environment: Gateway to Discovery","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067355729","display_name":"Richard D. LeDuc","orcid":"https://orcid.org/0000-0002-6951-2923"},"institutions":[{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Richard D. LeDuc","raw_affiliation_strings":["Indiana University, Bloomington, IN"],"affiliations":[{"raw_affiliation_string":"Indiana University, Bloomington, IN","institution_ids":["https://openalex.org/I4210119109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039718297","display_name":"Thomas G. Doak","orcid":"https://orcid.org/0000-0001-5487-553X"},"institutions":[{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Doak","raw_affiliation_strings":["Indiana University, Bloomington, IN"],"affiliations":[{"raw_affiliation_string":"Indiana University, Bloomington, IN","institution_ids":["https://openalex.org/I4210119109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110208519","display_name":"Le\u2010Shin Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Le-Shin Wu","raw_affiliation_strings":["Indiana University, Bloomington, IN"],"affiliations":[{"raw_affiliation_string":"Indiana University, Bloomington, IN","institution_ids":["https://openalex.org/I4210119109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037662959","display_name":"Philip D. Blood","orcid":"https://orcid.org/0000-0002-9129-1223"},"institutions":[{"id":"https://openalex.org/I35765314","display_name":"Pittsburgh Supercomputing Center","ror":"https://ror.org/04tac1482","country_code":"US","type":"facility","lineage":["https://openalex.org/I35765314"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Philip D. Blood","raw_affiliation_strings":["Pittsburgh Supercomputing Center, Pittsburgh, PA"],"affiliations":[{"raw_affiliation_string":"Pittsburgh Supercomputing Center, Pittsburgh, PA","institution_ids":["https://openalex.org/I35765314"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032851804","display_name":"Carrie Ganote","orcid":"https://orcid.org/0000-0003-3457-8954"},"institutions":[{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carrie L. Ganote","raw_affiliation_strings":["Indiana University, Bloomington, IN"],"affiliations":[{"raw_affiliation_string":"Indiana University, Bloomington, IN","institution_ids":["https://openalex.org/I4210119109"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020010821","display_name":"Matthew Vaughn","orcid":"https://orcid.org/0000-0002-1384-4283"},"institutions":[{"id":"https://openalex.org/I4388891828","display_name":"Texas Advanced Computing Center","ror":"https://ror.org/00xg4bh43","country_code":null,"type":"facility","lineage":["https://openalex.org/I4388891828","https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Vaughn","raw_affiliation_strings":["Texas Advanced Computing Center, Austin, Texas"],"affiliations":[{"raw_affiliation_string":"Texas Advanced Computing Center, Austin, Texas","institution_ids":["https://openalex.org/I4388891828"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5067355729"],"corresponding_institution_ids":["https://openalex.org/I4210119109"],"apc_list":null,"apc_paid":null,"fwci":3.875,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.94143435,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6699337959289551},{"id":"https://openalex.org/keywords/center","display_name":"Center (category theory)","score":0.6500866413116455},{"id":"https://openalex.org/keywords/research-center","display_name":"Research center","score":0.4720730781555176},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.09120777249336243}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6699337959289551},{"id":"https://openalex.org/C2779463800","wikidata":"https://www.wikidata.org/wiki/Q5062222","display_name":"Center (category theory)","level":2,"score":0.6500866413116455},{"id":"https://openalex.org/C2777532764","wikidata":"https://www.wikidata.org/wiki/Q31855","display_name":"Research center","level":2,"score":0.4720730781555176},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.09120777249336243},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2484762.2484790","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2484762.2484790","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Conference on Extreme Science and Engineering Discovery Environment: Gateway to Discovery","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6214325958","display_name":null,"funder_award_id":"1062432","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1583240815","https://openalex.org/W1969018883","https://openalex.org/W2017096350","https://openalex.org/W2042893247","https://openalex.org/W2043218878","https://openalex.org/W2062163923","https://openalex.org/W2079971866","https://openalex.org/W2136482257","https://openalex.org/W2156813399","https://openalex.org/W2156858199","https://openalex.org/W2161645441","https://openalex.org/W4231601595"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W1567716877","https://openalex.org/W2065091555","https://openalex.org/W2119279743","https://openalex.org/W2586359448","https://openalex.org/W1754260597","https://openalex.org/W2607263813","https://openalex.org/W247265095"],"abstract_inverted_index":{"The":[0],"National":[1],"Center":[2],"for":[3,68],"Genome":[4],"Analysis":[5],"Support":[6],"(NCGAS)":[7],"is":[8,40,80],"a":[9,41,81,114],"response":[10],"to":[11,29,33,52],"the":[12,20,34,54,98],"concern":[13],"that":[14,45],"NSF-funded":[15],"life":[16,35],"scientists":[17,70],"were":[18],"underutilizing":[19],"national":[21],"cyberinfrastructure,":[22],"because":[23],"there":[24],"has":[25],"been":[26],"little":[27],"effort":[28],"tailor":[30],"these":[31],"resources":[32],"scientist":[36],"communities":[37],"needs.":[38],"NCGAS":[39,79,102],"multi-institutional":[42],"service":[43],"center":[44],"provides":[46,103],"computational":[47],"resources,":[48],"specialized":[49],"systems":[50,57,121],"support":[51,109],"both":[53],"end-user":[55],"and":[56,63,97,107,124],"administrators,":[58],"curated":[59],"sets":[60],"of":[61,113],"applications,":[62],"most":[64],"importantly":[65],"scientific":[66],"consultations":[67],"domain":[69],"unfamiliar":[71],"with":[72],"next":[73],"generation":[74],"DNA":[75],"sequence":[76],"data":[77,116,119],"analysis.":[78],"partnership":[82],"between":[83],"Indiana":[84],"University":[85],"Pervasive":[86],"Technology":[87],"Institute,":[88],"Texas":[89],"Advanced":[90],"Computing":[91],"Center,":[92,96],"San":[93],"Diego":[94],"Supercomputing":[95,100],"Pittsburgh":[99],"Center.":[101],"hardened":[104],"bioinformatic":[105],"applications":[106],"user":[108],"on":[110],"all":[111],"aspects":[112],"user's":[115],"analysis,":[117],"including":[118],"management,":[120],"usage,":[122],"bioinformatics,":[123],"biostatistics":[125],"related":[126],"issues.":[127]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
