{"id":"https://openalex.org/W2038663531","doi":"https://doi.org/10.1145/2459118.2459127","title":"RobExT","display_name":"RobExT","publication_year":2012,"publication_date":"2012-01-23","ids":{"openalex":"https://openalex.org/W2038663531","doi":"https://doi.org/10.1145/2459118.2459127","mag":"2038663531"},"language":"en","primary_location":{"id":"doi:10.1145/2459118.2459127","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2459118.2459127","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 5th ACM COMPUTE Conference: Intelligent &amp; scalable system technologies","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103741251","display_name":"Shiva Kumar","orcid":null},"institutions":[{"id":"https://openalex.org/I2800727657","display_name":"Persistent Systems (India)","ror":"https://ror.org/03pekdw43","country_code":"IN","type":"education","lineage":["https://openalex.org/I2800727657"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Shiva Kumar","raw_affiliation_strings":["LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India","institution_ids":["https://openalex.org/I2800727657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023752569","display_name":"Vivek Kumar Singh","orcid":"https://orcid.org/0000-0002-8259-7087"},"institutions":[{"id":"https://openalex.org/I2800727657","display_name":"Persistent Systems (India)","ror":"https://ror.org/03pekdw43","country_code":"IN","type":"education","lineage":["https://openalex.org/I2800727657"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Vivek Singh","raw_affiliation_strings":["LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India","institution_ids":["https://openalex.org/I2800727657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055890955","display_name":"Vineet Jha","orcid":null},"institutions":[{"id":"https://openalex.org/I2800727657","display_name":"Persistent Systems (India)","ror":"https://ror.org/03pekdw43","country_code":"IN","type":"education","lineage":["https://openalex.org/I2800727657"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Vineet Jha","raw_affiliation_strings":["LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India","institution_ids":["https://openalex.org/I2800727657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051030808","display_name":"Priya Kulkarni","orcid":"https://orcid.org/0000-0001-8331-8740"},"institutions":[{"id":"https://openalex.org/I2800727657","display_name":"Persistent Systems (India)","ror":"https://ror.org/03pekdw43","country_code":"IN","type":"education","lineage":["https://openalex.org/I2800727657"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Priya Kulkarni","raw_affiliation_strings":["LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India","institution_ids":["https://openalex.org/I2800727657"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029853668","display_name":"Abhay Jere","orcid":null},"institutions":[{"id":"https://openalex.org/I2800727657","display_name":"Persistent Systems (India)","ror":"https://ror.org/03pekdw43","country_code":"IN","type":"education","lineage":["https://openalex.org/I2800727657"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Abhay Jere","raw_affiliation_strings":["LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LABS, Persistent Systems Ltd Bhageerath, Pune, Maharastra, India","institution_ids":["https://openalex.org/I2800727657"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I2800727657"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08680435,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.771694004535675},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6278404593467712},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6213988661766052},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5685845017433167},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5599819421768188},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.5358112454414368},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.44430363178253174},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43302732706069946},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4139580726623535},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.36128973960876465},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.18381226062774658},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14002802968025208},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.104363352060318},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08239051699638367}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.771694004535675},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6278404593467712},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6213988661766052},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5685845017433167},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5599819421768188},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.5358112454414368},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.44430363178253174},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43302732706069946},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4139580726623535},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.36128973960876465},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.18381226062774658},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14002802968025208},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.104363352060318},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08239051699638367},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2459118.2459127","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2459118.2459127","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 5th ACM COMPUTE Conference: Intelligent &amp; scalable system technologies","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.4099999964237213,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1495660511","https://openalex.org/W1978486653","https://openalex.org/W2038264484","https://openalex.org/W2045478141","https://openalex.org/W2117364474","https://openalex.org/W2137531873","https://openalex.org/W2155142785","https://openalex.org/W2156589821"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2579659702","https://openalex.org/W2154046714","https://openalex.org/W1965329638","https://openalex.org/W2189613078","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":{"CellDesigner":[0,78],"and":[1,54,113],"Cytoscape":[2,80],"are":[3,19],"popularly":[4],"used":[5],"tools":[6,18,43],"in":[7,29,50,56,73],"systems":[8],"biology":[9],"studies":[10],"for":[11,16,41,66,85],"biological":[12,35,120],"network":[13],"construction.":[14],"Plug-ins":[15],"these":[17,42],"also":[20],"available":[21],"which":[22],"enable":[23],"visualization":[24],"of":[25],"the":[26,30,33,57,74],"microarray":[27,67,115],"data":[28,63,116],"context":[31],"to":[32,77,97,110,118],"constructed":[34,122],"networks.":[36],"However,":[37],"a":[38,51,82],"major":[39],"limitation":[40],"is":[44,81],"that":[45,105],"they":[46],"accept":[47],"inputs":[48],"only":[49],"specified":[52],"format":[53,58,75],"not":[55],"generated":[59],"routinely":[60],"by":[61],"secondary":[62],"analysis":[64],"pipeline":[65],"data.":[68],"Generating":[69],"an":[70,95],"input":[71],"file":[72],"acceptable":[76],"and/or":[79],"non-trivial":[83],"task":[84],"biologists":[86,107],"with":[87,108],"very":[88],"limited":[89],"computation":[90],"experience.":[91],"Hence,":[92],"we":[93],"developed":[94],"easy":[96],"use":[98],"tool,":[99],"RobExT":[100],"(Robust":[101],"Expression":[102],"parsing":[103],"Tool),":[104],"empowers":[106],"capabilities":[109],"select,":[111],"cleanse":[112],"filter":[114],"relevant":[117],"their":[119],"networks":[121],"using":[123],"CellDesigner/Cytoscape.":[124]},"counts_by_year":[],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2016-06-24T00:00:00"}
