{"id":"https://openalex.org/W2118064054","doi":"https://doi.org/10.1145/1529282.1529455","title":"HIVSetSubtype","display_name":"HIVSetSubtype","publication_year":2009,"publication_date":"2009-03-08","ids":{"openalex":"https://openalex.org/W2118064054","doi":"https://doi.org/10.1145/1529282.1529455","mag":"2118064054"},"language":"en","primary_location":{"id":"doi:10.1145/1529282.1529455","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1529282.1529455","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2009 ACM symposium on Applied Computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082580140","display_name":"Luciano Vieira de Ara\u00fajo","orcid":"https://orcid.org/0000-0002-9687-5367"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Luciano V. de Ara\u00fajo","raw_affiliation_strings":["University of S\u00e3o Paulo, Rua do Mat\u00e3o, SP - Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of S\u00e3o Paulo, Rua do Mat\u00e3o, SP - Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057061938","display_name":"Sabri Saeed Sanabani","orcid":"https://orcid.org/0000-0002-8876-8262"},"institutions":[{"id":"https://openalex.org/I88273585","display_name":"Universidade Federal de S\u00e3o Paulo","ror":"https://ror.org/02k5swt12","country_code":"BR","type":"education","lineage":["https://openalex.org/I88273585"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Sabri S. Sanabani","raw_affiliation_strings":["Federal University of S\u00e3o Paulo, Brazil","Federal University of Sao Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Federal University of S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I88273585"]},{"raw_affiliation_string":"Federal University of Sao Paulo, Brazil","institution_ids":["https://openalex.org/I88273585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071061513","display_name":"\u00c9ster Cerdeira Sabino","orcid":"https://orcid.org/0000-0003-2623-5126"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ester C. Sabino","raw_affiliation_strings":["University of S\u00e3o Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008405795","display_name":"Jo\u00e3o Eduardo Ferreira","orcid":"https://orcid.org/0000-0001-9607-2014"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o E. Ferreira","raw_affiliation_strings":["University of S\u00e3o Paulo, Rua do Mat\u00e3o, SP"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of S\u00e3o Paulo, Rua do Mat\u00e3o, SP","institution_ids":["https://openalex.org/I17974374"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1103,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.49900319,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"811","last_page":"815"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subtyping","display_name":"Subtyping","score":0.9042199850082397},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6568642258644104},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5679651498794556},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5345674157142639},{"id":"https://openalex.org/keywords/human-immunodeficiency-virus","display_name":"Human immunodeficiency virus (HIV)","score":0.5026299953460693},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.44149452447891235},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4171516001224518},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.225652813911438},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2187979817390442},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.14341309666633606},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.11730414628982544}],"concepts":[{"id":"https://openalex.org/C83852419","wikidata":"https://www.wikidata.org/wiki/Q2713292","display_name":"Subtyping","level":2,"score":0.9042199850082397},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6568642258644104},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5679651498794556},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5345674157142639},{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.5026299953460693},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.44149452447891235},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4171516001224518},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.225652813911438},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2187979817390442},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.14341309666633606},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.11730414628982544},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1529282.1529455","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1529282.1529455","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2009 ACM symposium on Applied Computing","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7300000190734863,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2160147096","display_name":null,"funder_award_id":"482139/2007-2","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G6977210994","display_name":null,"funder_award_id":"04/15856-92006/50096-0","funder_id":"https://openalex.org/F4320320997","funder_display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo"}],"funders":[{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320338304","display_name":"Los Alamos National Laboratory","ror":"https://ror.org/01e41cf67"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1577030240","https://openalex.org/W1773019931","https://openalex.org/W1986101583","https://openalex.org/W1990096140","https://openalex.org/W2003756002","https://openalex.org/W2009570821","https://openalex.org/W2034377370","https://openalex.org/W2052738847","https://openalex.org/W2055043387","https://openalex.org/W2064347382","https://openalex.org/W2126477090","https://openalex.org/W2135729452","https://openalex.org/W2149060381","https://openalex.org/W2158666214","https://openalex.org/W2160469031","https://openalex.org/W2163400707","https://openalex.org/W4245668478"],"related_works":["https://openalex.org/W2396009657","https://openalex.org/W2799110842","https://openalex.org/W3032826521","https://openalex.org/W2391332606","https://openalex.org/W1462775415","https://openalex.org/W4229853287","https://openalex.org/W1535483699","https://openalex.org/W2008549446","https://openalex.org/W4399363637","https://openalex.org/W2382431814"],"abstract_inverted_index":{"An":[0],"automated":[1],"web":[2],"based":[3],"tool":[4],"for":[5,29],"assigning":[6],"HIV-1":[7,45],"pure":[8],"and":[9,24,43],"recombinant":[10],"subtypes":[11],"within":[12],"unaligned":[13],"sequences":[14],"is":[15],"presented.":[16],"The":[17,34],"system":[18],"combines":[19],"the":[20,25],"BLAST":[21],"search":[22],"algorithm":[23],"recombination":[26],"identification":[27],"program":[28],"genetic":[30],"subtyping":[31],"of":[32,41],"HIV-1.":[33],"software":[35],"was":[36],"validated":[37],"through":[38],"combined":[39],"analysis":[40],"simulated":[42],"other":[44],"real":[46],"data.":[47]},"counts_by_year":[{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2016-06-24T00:00:00"}
