{"id":"https://openalex.org/W7171567575","doi":"https://doi.org/10.1145/3807503.3819358","title":"Learning and Neutralizing Structured Stochasticity in DNA Synthesis for Deterministic Entropy Conditioning","display_name":"Learning and Neutralizing Structured Stochasticity in DNA Synthesis for Deterministic Entropy Conditioning","publication_year":2026,"publication_date":"2026-06-30","ids":{"openalex":"https://openalex.org/W7171567575","doi":"https://doi.org/10.1145/3807503.3819358"},"language":null,"primary_location":{"id":"doi:10.1145/3807503.3819358","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3807503.3819358","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 17th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1145/3807503.3819358","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5143861216","display_name":"Zhiyi Zheng","orcid":"https://orcid.org/0009-0004-4854-1268"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiyi Zheng","raw_affiliation_strings":["Center for Applied Mathematics, Tianjin University, Tianjin, China"],"raw_orcid":"https://orcid.org/0009-0004-4854-1268","affiliations":[{"raw_affiliation_string":"Center for Applied Mathematics, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009568764","display_name":"X.-M. Chen","orcid":"https://orcid.org/0000-0003-2521-6732"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Chen","raw_affiliation_strings":["Center for Applied Mathematics, Tianjin University, Tianjin, China"],"raw_orcid":"https://orcid.org/0000-0003-2521-6732","affiliations":[{"raw_affiliation_string":"Center for Applied Mathematics, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I162868743"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":null,"topics":[],"keywords":[{"id":"https://openalex.org/keywords/entropy","display_name":"Entropy (arrow of time)","score":0.5149999856948853},{"id":"https://openalex.org/keywords/conditioning","display_name":"Conditioning","score":0.415800005197525},{"id":"https://openalex.org/keywords/entropy-production","display_name":"Entropy production","score":0.32989999651908875},{"id":"https://openalex.org/keywords/quantitative-biology","display_name":"Quantitative biology","score":0.26100000739097595}],"concepts":[{"id":"https://openalex.org/C106301342","wikidata":"https://www.wikidata.org/wiki/Q4117933","display_name":"Entropy (arrow of time)","level":2,"score":0.5149999856948853},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43320000171661377},{"id":"https://openalex.org/C121864883","wikidata":"https://www.wikidata.org/wiki/Q677916","display_name":"Statistical physics","level":1,"score":0.42179998755455017},{"id":"https://openalex.org/C45262634","wikidata":"https://www.wikidata.org/wiki/Q5159291","display_name":"Conditioning","level":2,"score":0.415800005197525},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.39980000257492065},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.35569998621940613},{"id":"https://openalex.org/C207282930","wikidata":"https://www.wikidata.org/wiki/Q5380811","display_name":"Entropy production","level":2,"score":0.32989999651908875},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2849000096321106},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.26899999380111694},{"id":"https://openalex.org/C2992708514","wikidata":"https://www.wikidata.org/wiki/Q48968323","display_name":"Quantitative biology","level":2,"score":0.26100000739097595},{"id":"https://openalex.org/C8272713","wikidata":"https://www.wikidata.org/wiki/Q176737","display_name":"Stochastic process","level":2,"score":0.25949999690055847},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.25929999351501465}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3807503.3819358","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3807503.3819358","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 17th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3807503.3819358","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3807503.3819358","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 17th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W18818645","https://openalex.org/W106528892","https://openalex.org/W1019830208","https://openalex.org/W1517403092","https://openalex.org/W1971584645","https://openalex.org/W2018604728","https://openalex.org/W2029583307","https://openalex.org/W2061680337","https://openalex.org/W2131088968","https://openalex.org/W2157331557","https://openalex.org/W2198606573","https://openalex.org/W2345512687","https://openalex.org/W2784781042","https://openalex.org/W2898230711","https://openalex.org/W2908510526","https://openalex.org/W3103867685","https://openalex.org/W4205550388","https://openalex.org/W4385245566"],"related_works":[],"abstract_inverted_index":{"DNA":[0],"synthesis":[1],"has":[2],"been":[3],"proposed":[4],"as":[5],"a":[6,24,29,37,60],"massively":[7],"parallel":[8],"physical":[9],"entropy":[10,68],"source,":[11],"yet":[12],"mapped":[13],"bitstreams":[14],"often":[15],"retain":[16],"biased,":[17],"locally":[18],"dependent":[19],"structure.":[20],"We":[21,41],"present":[22],"DNACond,":[23],"deterministic,":[25],"length-preserving":[26],"conditioner":[27],"using":[28],"lightweight":[30],"1D":[31],"convolutional":[32],"model,":[33],"deterministic":[34],"binarization,":[35],"and":[36,63],"pre-specified":[38],"XOR":[39],"shift-mix.":[40],"evaluate":[42],"three":[43],"DNA-synthesis":[44],"TRNG":[45],"datasets":[46],"(Eurofins,":[47],"Microsynth1,":[48],"Microsynth2)":[49],"plus":[50],"external":[51],"HT-SELEX":[52],"cycle-0":[53],"validation":[54],"(ENA":[55],"ERP001824).":[56],"DNACond":[57],"is":[58],"not":[59,65],"seeded":[61],"extractor":[62],"does":[64],"claim":[66],"information-theoretic":[67],"amplification.":[69]},"counts_by_year":[],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2026-07-29T00:00:00"}
