{"id":"https://openalex.org/W4412106645","doi":"https://doi.org/10.1145/3712256.3726477","title":"Evolutionary Algorithms for Metabolic Transformation through Multi-gene Knockout Optimization","display_name":"Evolutionary Algorithms for Metabolic Transformation through Multi-gene Knockout Optimization","publication_year":2025,"publication_date":"2025-07-08","ids":{"openalex":"https://openalex.org/W4412106645","doi":"https://doi.org/10.1145/3712256.3726477"},"language":"en","primary_location":{"id":"doi:10.1145/3712256.3726477","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3712256.3726477","pdf_url":null,"source":{"id":"https://openalex.org/S4363608932","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1145/3712256.3726477","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005229935","display_name":"Bruno Vin\u00edcios Cunha de S\u00e1","orcid":null},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Bruno S\u00e1","raw_affiliation_strings":["University of Minho, Braga, Portugal"],"raw_orcid":"https://orcid.org/0009-0005-5353-1598","affiliations":[{"raw_affiliation_string":"University of Minho, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039886913","display_name":"Alexandre Oliveira","orcid":"https://orcid.org/0000-0002-2255-8983"},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Alexandre Oliveira","raw_affiliation_strings":["University of Minho, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-2255-8983","affiliations":[{"raw_affiliation_string":"University of Minho, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040524717","display_name":"Miguel Rocha","orcid":"https://orcid.org/0000-0001-8439-8172"},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Miguel Rocha","raw_affiliation_strings":["University of Minho, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0001-8439-8172","affiliations":[{"raw_affiliation_string":"University of Minho, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5005229935"],"corresponding_institution_ids":["https://openalex.org/I99682543"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.34951456,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1489","last_page":"1496"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10171","display_name":"Biofuel production and bioconversion","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11663","display_name":"Viral Infectious Diseases and Gene Expression in Insects","score":0.9842000007629395,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5982571840286255},{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.5827127695083618},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.5203192234039307},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.45725128054618835},{"id":"https://openalex.org/keywords/evolutionary-computation","display_name":"Evolutionary computation","score":0.44889193773269653},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4418715238571167},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33990809321403503},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.33379775285720825},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.23989424109458923},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.177684485912323},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17750504612922668}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5982571840286255},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.5827127695083618},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.5203192234039307},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.45725128054618835},{"id":"https://openalex.org/C105902424","wikidata":"https://www.wikidata.org/wiki/Q1197129","display_name":"Evolutionary computation","level":2,"score":0.44889193773269653},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4418715238571167},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33990809321403503},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.33379775285720825},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.23989424109458923},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.177684485912323},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17750504612922668},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3712256.3726477","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3712256.3726477","pdf_url":null,"source":{"id":"https://openalex.org/S4363608932","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3712256.3726477","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3712256.3726477","pdf_url":null,"source":{"id":"https://openalex.org/S4363608932","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W2029403511","https://openalex.org/W2031849942","https://openalex.org/W2076262841","https://openalex.org/W2078355959","https://openalex.org/W2082382448","https://openalex.org/W2099787654","https://openalex.org/W2102164505","https://openalex.org/W2119895230","https://openalex.org/W2124404351","https://openalex.org/W2126525177","https://openalex.org/W2144511134","https://openalex.org/W2160541874","https://openalex.org/W2195297884","https://openalex.org/W2223326830","https://openalex.org/W2935179270","https://openalex.org/W2952015518","https://openalex.org/W2968583565","https://openalex.org/W4386294701"],"related_works":["https://openalex.org/W4297582752","https://openalex.org/W4285805405","https://openalex.org/W2391924736","https://openalex.org/W3133779647","https://openalex.org/W1560122427","https://openalex.org/W3041827036","https://openalex.org/W1993493607","https://openalex.org/W2021957875","https://openalex.org/W2802808995","https://openalex.org/W2787833928"],"abstract_inverted_index":{"The":[0],"Metabolic":[1,42],"Transformation":[2],"Algorithm":[3],"(MTA)":[4],"leverages":[5],"constraint-based":[6],"modeling":[7],"to":[8,21],"identify":[9],"metabolic":[10],"interventions":[11],"capable":[12],"of":[13,39],"shifting":[14],"a":[15,22],"biological":[16],"system":[17],"from":[18],"an":[19],"undesired":[20],"desired":[23],"state.":[24],"Its":[25],"robust":[26],"extension":[27],"(rMTA)":[28],"strengthens":[29],"predictive":[30],"accuracy":[31],"through":[32],"worst-case":[33],"scenario":[34],"analyses":[35],"and":[36],"the":[37],"integration":[38],"Minimization":[40],"Of":[41],"Adjustment":[43],"(MOMA)":[44],"algorithm.":[45]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
