{"id":"https://openalex.org/W4407255223","doi":"https://doi.org/10.1145/3708778.3708797","title":"Exploring Taiwan Monkeypox Virus (MPOX/MPXV) Clade IIb by Establishing Dataset and Clustering by using Sequence and Image Similarity Comparisons","display_name":"Exploring Taiwan Monkeypox Virus (MPOX/MPXV) Clade IIb by Establishing Dataset and Clustering by using Sequence and Image Similarity Comparisons","publication_year":2024,"publication_date":"2024-11-22","ids":{"openalex":"https://openalex.org/W4407255223","doi":"https://doi.org/10.1145/3708778.3708797"},"language":"en","primary_location":{"id":"doi:10.1145/3708778.3708797","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3708778.3708797","pdf_url":null,"source":null,"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 7th International Conference on Computational Intelligence and Intelligent Systems","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1145/3708778.3708797","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043246110","display_name":"Tzung-Wei Wang","orcid":"https://orcid.org/0009-0007-5057-2567"},"institutions":[{"id":"https://openalex.org/I173093425","display_name":"Chang Gung University","ror":"https://ror.org/00d80zx46","country_code":"TW","type":"education","lineage":["https://openalex.org/I173093425"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tzung-Wei Wang","raw_affiliation_strings":["Dept. of Electronics Engineering, Chang Gung University, Taoyuan, Taiwan, Taiwan"],"raw_orcid":"https://orcid.org/0009-0007-5057-2567","affiliations":[{"raw_affiliation_string":"Dept. of Electronics Engineering, Chang Gung University, Taoyuan, Taiwan, Taiwan","institution_ids":["https://openalex.org/I173093425"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Ming-Kuang Li","orcid":"https://orcid.org/0009-0000-2147-1563"},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ming-Kuang Li","raw_affiliation_strings":["Dept. of Computer Science and Information Engineering, ASIA University Taiwan, Taichung, Taiwan, Taiwan"],"raw_orcid":"https://orcid.org/0009-0000-2147-1563","affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Information Engineering, ASIA University Taiwan, Taichung, Taiwan, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017883735","display_name":"Der\u2010Chyuan Lou","orcid":"https://orcid.org/0000-0001-6697-7648"},"institutions":[{"id":"https://openalex.org/I173093425","display_name":"Chang Gung University","ror":"https://ror.org/00d80zx46","country_code":"TW","type":"education","lineage":["https://openalex.org/I173093425"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Der-Chyuan Lou","raw_affiliation_strings":["Dept. of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan, Taiwan"],"raw_orcid":"https://orcid.org/0000-0001-6697-7648","affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan, Taiwan","institution_ids":["https://openalex.org/I173093425"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101479832","display_name":"Chun\u2010Yuan Lin","orcid":"https://orcid.org/0000-0003-1796-6189"},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chun-Yuan Lin","raw_affiliation_strings":["Dept. of Computer Science and Information Engineering, ASIA University Taiwan, Taichung, Taiwan, Taiwan"],"raw_orcid":"https://orcid.org/0000-0003-1796-6189","affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Information Engineering, ASIA University Taiwan, Taichung, Taiwan, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.0335,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.78604651,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"133","last_page":"138"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11767","display_name":"Poxvirus research and outbreaks","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11767","display_name":"Poxvirus research and outbreaks","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/monkeypox","display_name":"Monkeypox","score":0.8265264630317688},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.679686963558197},{"id":"https://openalex.org/keywords/clade","display_name":"Clade","score":0.6214677691459656},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5318759679794312},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4896548390388489},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4679105877876282},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4136890172958374},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38279399275779724},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3162292540073395},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.27503103017807007},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1768227219581604},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.16161981225013733},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14012053608894348}],"concepts":[{"id":"https://openalex.org/C2778011067","wikidata":"https://www.wikidata.org/wiki/Q382370","display_name":"Monkeypox","level":5,"score":0.8265264630317688},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.679686963558197},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.6214677691459656},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5318759679794312},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4896548390388489},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4679105877876282},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4136890172958374},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38279399275779724},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3162292540073395},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.27503103017807007},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1768227219581604},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.16161981225013733},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14012053608894348},{"id":"https://openalex.org/C40767141","wikidata":"https://www.wikidata.org/wiki/Q285697","display_name":"Recombinant DNA","level":3,"score":0.0},{"id":"https://openalex.org/C2781356689","wikidata":"https://www.wikidata.org/wiki/Q1986297","display_name":"Vaccinia","level":4,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3708778.3708797","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3708778.3708797","pdf_url":null,"source":null,"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 7th International Conference on Computational Intelligence and Intelligent Systems","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3708778.3708797","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3708778.3708797","pdf_url":null,"source":null,"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 7th International Conference on Computational Intelligence and Intelligent Systems","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":4,"referenced_works":["https://openalex.org/W2059971059","https://openalex.org/W2073161435","https://openalex.org/W2502949459","https://openalex.org/W4310215776"],"related_works":["https://openalex.org/W2031710541","https://openalex.org/W4312205156","https://openalex.org/W4378651324","https://openalex.org/W4311511477","https://openalex.org/W4378807269","https://openalex.org/W4389060959","https://openalex.org/W2943342539","https://openalex.org/W4291000757","https://openalex.org/W1838217343","https://openalex.org/W4293236375"],"abstract_inverted_index":{"Based":[0],"on":[1,24],"the":[2,28,34,54,63,91,98,115,129,163,183,200],"MPXV":[3,29,47,68,102,122,134,167,190],"Clade":[4,48,69,103,123,191],"IIb":[5,49,70,104,124],"cases":[6,30,125],"in":[7,31,53,76,189],"Taiwan,":[8,32,77],"175":[9],"segments":[10],"were":[11],"identified":[12],"from":[13,42,169],"OPG001":[14],"to":[15,140,181],"OPG210.":[16],"The":[17,59,87],"first":[18],"focus":[19],"of":[20,27,46,66,93,101,120,132,165,185],"this":[21,144,175],"paper":[22],"is":[23],"sequence":[25,142],"analysis":[26,184,204],"detailing":[33],"procedures,":[35],"including":[36],"semi-automated":[37],"segmentation":[38],"and":[39,56,118,136,179,205],"dataset":[40,75,81],"creation":[41],"a":[43,80],"large":[44],"number":[45],"nucleotide":[50],"sequences":[51,168],"found":[52],"NCBI":[55],"GISAID":[57],"databases.":[58],"second":[60],"feature":[61],"highlights":[62],"pioneering":[64],"establishment":[65],"an":[67],"RNA":[71,105],"2nd":[72,106],"structure":[73,107],"image":[74],"as":[78,194],"such":[79,193],"does":[82],"not":[83,112],"yet":[84],"exist":[85],"globally.":[86],"third":[88],"characteristic":[89],"involves":[90],"use":[92],"unsupervised":[94],"learning":[95],"methods":[96],"for":[97,114,128,203],"rapid":[99,130],"clustering":[100,119],"images.":[108],"This":[109],"approach":[110],"allows":[111],"only":[113],"quick":[116],"detection":[117],"unknown":[121],"but":[126],"also":[127],"identification":[131],"new":[133,145],"mutations":[135],"structural":[137],"changes.":[138],"Compared":[139],"traditional":[141],"analysis,":[143],"hybrid":[146],"systematic":[147],"method":[148,180],"significantly":[149],"enhances":[150],"overall":[151],"efficiency,":[152],"improving":[153],"processing":[154],"speed":[155],"by":[156],"at":[157],"least":[158],"24":[159],"hours":[160],"when":[161],"handling":[162],"alignment":[164],"10":[166],"Taiwan.":[170],"Future":[171],"plans":[172],"include":[173],"using":[174],"prototype":[176],"analytical":[177],"model":[178],"accelerate":[182],"critical":[186],"lethal":[187],"factors":[188],"IIb,":[192],"D14L,":[195],"ultimately":[196],"helping":[197],"biologists":[198],"reduce":[199],"time":[201],"required":[202],"antiviral":[206],"drug":[207],"development.":[208]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
