{"id":"https://openalex.org/W4406364001","doi":"https://doi.org/10.1145/3700666.3700697","title":"Implementation and Evaluation of Models for Synthetic Generation of Spectral Signals to Balance Metabolomic Data","display_name":"Implementation and Evaluation of Models for Synthetic Generation of Spectral Signals to Balance Metabolomic Data","publication_year":2024,"publication_date":"2024-09-13","ids":{"openalex":"https://openalex.org/W4406364001","doi":"https://doi.org/10.1145/3700666.3700697"},"language":"en","primary_location":{"id":"doi:10.1145/3700666.3700697","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3700666.3700697","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Conference on Bioinformatics Research and Applications","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115876752","display_name":"Mar\u00eda Martin Asiain","orcid":null},"institutions":[{"id":"https://openalex.org/I175051016","display_name":"Universidad Publica de Navarra","ror":"https://ror.org/02z0cah89","country_code":"ES","type":"education","lineage":["https://openalex.org/I175051016"]},{"id":"https://openalex.org/I4210092551","display_name":"Vicomtech","ror":"https://ror.org/0023sah13","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210092551"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Mar\u00eda Martin Asiain","raw_affiliation_strings":["Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","Electric, Electronic and Communications Department, Universidad P\u00fablica de Navarra, Pamplona, Spain"],"raw_orcid":"https://orcid.org/0009-0007-5273-6852","affiliations":[{"raw_affiliation_string":"Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I4210092551"]},{"raw_affiliation_string":"Electric, Electronic and Communications Department, Universidad P\u00fablica de Navarra, Pamplona, Spain","institution_ids":["https://openalex.org/I175051016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079913178","display_name":"Francisco Londo\u00f1o","orcid":"https://orcid.org/0000-0002-7277-4625"},"institutions":[{"id":"https://openalex.org/I4210092551","display_name":"Vicomtech","ror":"https://ror.org/0023sah13","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210092551"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Francisco Londono-Hoyos","raw_affiliation_strings":["Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain"],"raw_orcid":"https://orcid.org/0000-0002-7277-4625","affiliations":[{"raw_affiliation_string":"Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I4210092551"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056472622","display_name":"Mikel Hernandez","orcid":"https://orcid.org/0000-0002-4470-9674"},"institutions":[{"id":"https://openalex.org/I169108374","display_name":"University of the Basque Country","ror":"https://ror.org/000xsnr85","country_code":"ES","type":"education","lineage":["https://openalex.org/I169108374"]},{"id":"https://openalex.org/I4210092551","display_name":"Vicomtech","ror":"https://ror.org/0023sah13","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210092551"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Mikel Hernandez","raw_affiliation_strings":["Computer Science and Artificial Intelligence, University of the Basque Country (UPV/EHU), Donostia-San Sebastian, Spain","Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain"],"raw_orcid":"https://orcid.org/0000-0002-4470-9674","affiliations":[{"raw_affiliation_string":"Computer Science and Artificial Intelligence, University of the Basque Country (UPV/EHU), Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I169108374"]},{"raw_affiliation_string":"Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I4210092551"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034994292","display_name":"Gorka Epelde","orcid":"https://orcid.org/0000-0002-5179-415X"},"institutions":[{"id":"https://openalex.org/I4210092551","display_name":"Vicomtech","ror":"https://ror.org/0023sah13","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210092551"]},{"id":"https://openalex.org/I4210100188","display_name":"Biogipuzkoa Health Research Institute","ror":"https://ror.org/01a2wsa50","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210100188"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Gorka Epelde Unanue","raw_affiliation_strings":["Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","eHealth Group, Biogipuzkoa Health Research Institute, Donostia-San Sebastian, Spain"],"raw_orcid":"https://orcid.org/0000-0002-5179-415X","affiliations":[{"raw_affiliation_string":"Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I4210092551"]},{"raw_affiliation_string":"eHealth Group, Biogipuzkoa Health Research Institute, Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I4210100188"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055887437","display_name":"Rub\u00e9n Gil\u2010Redondo","orcid":"https://orcid.org/0000-0002-3541-9085"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Rub\u00e9n Gil Redondo","raw_affiliation_strings":["Precision Medicine and Metabolism Laboratory, CIC bioGUNE, Derio, Spain"],"raw_orcid":"https://orcid.org/0000-0002-3541-9085","affiliations":[{"raw_affiliation_string":"Precision Medicine and Metabolism Laboratory, CIC bioGUNE, Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026095910","display_name":"Ricardo Conde","orcid":"https://orcid.org/0000-0003-4372-081X"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ricardo Conde","raw_affiliation_strings":["Precision Medicine and Metabolism Laboratory, CIC bioGUNE, Derio, Spain"],"raw_orcid":"https://orcid.org/0000-0003-4372-081X","affiliations":[{"raw_affiliation_string":"Precision Medicine and Metabolism Laboratory, CIC bioGUNE, Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054255043","display_name":"\u00d3scar Millet","orcid":"https://orcid.org/0000-0001-8748-4105"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Oscar Millet","raw_affiliation_strings":["Precision Medicine and Metabolism Laboratory, CIC bioGUNE, Derio, Spain"],"raw_orcid":"https://orcid.org/0000-0001-8748-4105","affiliations":[{"raw_affiliation_string":"Precision Medicine and Metabolism Laboratory, CIC bioGUNE, Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052326707","display_name":"Andoni Beristain","orcid":"https://orcid.org/0000-0002-5452-2141"},"institutions":[{"id":"https://openalex.org/I169108374","display_name":"University of the Basque Country","ror":"https://ror.org/000xsnr85","country_code":"ES","type":"education","lineage":["https://openalex.org/I169108374"]},{"id":"https://openalex.org/I4210092551","display_name":"Vicomtech","ror":"https://ror.org/0023sah13","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210092551"]},{"id":"https://openalex.org/I4210100188","display_name":"Biogipuzkoa Health Research Institute","ror":"https://ror.org/01a2wsa50","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210100188"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Andoni Beristain","raw_affiliation_strings":["Computer Science and Artificial Intelligence, University of the Basque Country (UPV/EHU), Donostia-San Sebastian, Spain","Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","eHealth Group, Biogipuzkoa Health Research Institute, Donostia-San Sebastian, Spain"],"raw_orcid":"https://orcid.org/0000-0002-5452-2141","affiliations":[{"raw_affiliation_string":"Computer Science and Artificial Intelligence, University of the Basque Country (UPV/EHU), Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I169108374"]},{"raw_affiliation_string":"Digital Health and Biomedical Technologies, Vicomtech Foundation, Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I4210092551"]},{"raw_affiliation_string":"eHealth Group, Biogipuzkoa Health Research Institute, Donostia-San Sebastian, Spain","institution_ids":["https://openalex.org/I4210100188"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5115876752"],"corresponding_institution_ids":["https://openalex.org/I175051016","https://openalex.org/I4210092551"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.21470508,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"85","last_page":"91"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10640","display_name":"Spectroscopy and Chemometric Analyses","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/1602","display_name":"Analytical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11667","display_name":"Advanced Chemical Sensor Technologies","score":0.9509999752044678,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.592934787273407},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.5374864339828491},{"id":"https://openalex.org/keywords/balance","display_name":"Balance (ability)","score":0.5257378816604614},{"id":"https://openalex.org/keywords/spectral-analysis","display_name":"Spectral analysis","score":0.4432833790779114},{"id":"https://openalex.org/keywords/data-modeling","display_name":"Data modeling","score":0.4402744174003601},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.36797353625297546},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1715812385082245},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.08614516258239746},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.0748593807220459}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.592934787273407},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.5374864339828491},{"id":"https://openalex.org/C168031717","wikidata":"https://www.wikidata.org/wiki/Q1530280","display_name":"Balance (ability)","level":2,"score":0.5257378816604614},{"id":"https://openalex.org/C2983668108","wikidata":"https://www.wikidata.org/wiki/Q280453","display_name":"Spectral analysis","level":3,"score":0.4432833790779114},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.4402744174003601},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.36797353625297546},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1715812385082245},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.08614516258239746},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0748593807220459},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C99508421","wikidata":"https://www.wikidata.org/wiki/Q2678675","display_name":"Physical medicine and rehabilitation","level":1,"score":0.0},{"id":"https://openalex.org/C32891209","wikidata":"https://www.wikidata.org/wiki/Q483666","display_name":"Spectroscopy","level":2,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3700666.3700697","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3700666.3700697","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Conference on Bioinformatics Research and Applications","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1720187235","https://openalex.org/W2046262868","https://openalex.org/W2133506114","https://openalex.org/W2511469479","https://openalex.org/W2914001277","https://openalex.org/W2974031746","https://openalex.org/W3005335661","https://openalex.org/W3018833029","https://openalex.org/W4224022798","https://openalex.org/W4384788104","https://openalex.org/W4387521890","https://openalex.org/W4389074988","https://openalex.org/W4397555570","https://openalex.org/W6720208624"],"related_works":["https://openalex.org/W4283390424","https://openalex.org/W2137270828","https://openalex.org/W1976072307","https://openalex.org/W4205440119","https://openalex.org/W1561393703","https://openalex.org/W4292104203","https://openalex.org/W2040768604","https://openalex.org/W2096576371","https://openalex.org/W3135636879","https://openalex.org/W3041970450"],"abstract_inverted_index":{"Although":[0],"the":[1,85,90,112,145,150,159,183,187,204,229,240],"advance":[2],"of":[3,94,114,149,208,231,242],"Artificial":[4],"Intelligence":[5],"(AI)":[6],"in":[7,26,206],"medicine":[8],"is":[9,23,69,247],"significant,":[10],"its":[11],"potential":[12],"impact":[13],"depends":[14],"on":[15],"access":[16],"to":[17,42,71,125,130,134,143,153,249,252],"quality":[18],"data.":[19],"A":[20],"particular":[21],"challenge":[22],"class":[24,237],"imbalance":[25,31],"medical":[27],"data":[28,56,92,233],"sets.":[29],"This":[30],"can":[32,221,238],"introduce":[33],"biases":[34],"into":[35],"AI":[36],"models":[37,104],"that":[38,215,228],"reduce":[39],"their":[40,132],"ability":[41],"accurately":[43],"identify":[44],"and/or":[45],"diagnose":[46],"less":[47],"common":[48],"health":[49],"conditions.":[50],"To":[51],"address":[52],"this":[53,66],"problem,":[54],"synthetic":[55,91,115,120,190,216,232],"generation":[57,93,113,220],"techniques":[58],"have":[59,108,122,192],"emerged":[60],"as":[61],"a":[62,73,176,235],"promising":[63],"strategy.":[64],"In":[65],"project,":[67],"it":[68,211,246],"proposed":[70],"balance":[72],"dataset":[74,225],"with":[75,79,84,175],"patients\u2019":[76],"metabolic":[77],"profiles":[78],"and":[80,106,147,152,167,189,196],"without":[81],"conditions":[82],"associated":[83],"Metabolic":[86],"Syndrome":[87],"(MetS),":[88],"through":[89],"nuclear":[95],"magnetic":[96],"resonance":[97],"(NMR)":[98],"spectral":[99,117,218],"signals.":[100,118],"Two":[101],"deep":[102],"learning":[103],"(GAN":[105],"VAE)":[107],"been":[109,123,193,213],"implemented":[110],"for":[111,181,224],"NMR":[116,217],"The":[119,140,170],"signals":[121,136,151,191,205],"subjected":[124],"analysis":[126,198,241],"using":[127],"various":[128],"metrics":[129,142],"evaluate":[131],"similarity":[133,202],"real":[135,188],"from":[137,234],"blood":[138],"samples.":[139],"used":[141],"compare":[144],"shape":[146],"trend":[148],"examine":[154],"correlations":[155],"between":[156,186,203],"metabolites":[157],"include":[158],"Pearson":[160],"correlation":[161,184],"coefficient,":[162],"Dynamic":[163],"Time":[164],"Warping":[165],"(DTW)":[166],"heat":[168],"maps.":[169],"best":[171],"results":[172,185],"were":[173],"achieved":[174],"Variational":[177],"Autoencoder":[178],"(VAE)":[179],"model,":[180],"which":[182],"consistently":[194],"high,":[195],"DTW":[197],"has":[199,212],"shown":[200,214],"significant":[201],"terms":[207],"shape.":[209],"Overall,":[210],"signal":[219],"be":[222],"applied":[223],"balance,":[226],"proving":[227],"inclusion":[230],"minority":[236],"improve":[239],"unbalanced":[243],"datasets,":[244],"although":[245],"essential":[248],"explore":[250],"strategies":[251],"assess":[253],"further":[254],"these":[255],"results.":[256]},"counts_by_year":[],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
