{"id":"https://openalex.org/W4406363756","doi":"https://doi.org/10.1145/3700666.3700691","title":"Identifying Proteotypic Peptides via Deep Learning","display_name":"Identifying Proteotypic Peptides via Deep Learning","publication_year":2024,"publication_date":"2024-09-13","ids":{"openalex":"https://openalex.org/W4406363756","doi":"https://doi.org/10.1145/3700666.3700691"},"language":"en","primary_location":{"id":"doi:10.1145/3700666.3700691","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3700666.3700691","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Conference on Bioinformatics Research and Applications","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1145/3700666.3700691","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017098110","display_name":"Fawad Kirmani","orcid":"https://orcid.org/0009-0000-2096-4569"},"institutions":[{"id":"https://openalex.org/I155781252","display_name":"University of South Carolina","ror":"https://ror.org/02b6qw903","country_code":"US","type":"education","lineage":["https://openalex.org/I155781252"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Fawad Kirmani","raw_affiliation_strings":["Computer Science and Engineering, University of South Carolina, Columbia, South Carolina, USA"],"raw_orcid":"https://orcid.org/0009-0000-2096-4569","affiliations":[{"raw_affiliation_string":"Computer Science and Engineering, University of South Carolina, Columbia, South Carolina, USA","institution_ids":["https://openalex.org/I155781252"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073982528","display_name":"Bryan Jeremy Lane","orcid":null},"institutions":[{"id":"https://openalex.org/I155781252","display_name":"University of South Carolina","ror":"https://ror.org/02b6qw903","country_code":"US","type":"education","lineage":["https://openalex.org/I155781252"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bryan Lane","raw_affiliation_strings":["Computer Science and Engineering, University of South Carolina, Columbia, South Carolina, USA"],"raw_orcid":"https://orcid.org/0009-0003-8119-7000","affiliations":[{"raw_affiliation_string":"Computer Science and Engineering, University of South Carolina, Columbia, South Carolina, USA","institution_ids":["https://openalex.org/I155781252"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112054359","display_name":"John R. Rose","orcid":"https://orcid.org/0000-0001-7600-7215"},"institutions":[{"id":"https://openalex.org/I155781252","display_name":"University of South Carolina","ror":"https://ror.org/02b6qw903","country_code":"US","type":"education","lineage":["https://openalex.org/I155781252"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Rose","raw_affiliation_strings":["Computer Science and Engineering, University of South Carolina, Columbia, South Carolina, USA"],"raw_orcid":"https://orcid.org/0000-0001-7600-7215","affiliations":[{"raw_affiliation_string":"Computer Science and Engineering, University of South Carolina, Columbia, South Carolina, USA","institution_ids":["https://openalex.org/I155781252"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5017098110"],"corresponding_institution_ids":["https://openalex.org/I155781252"],"apc_list":null,"apc_paid":null,"fwci":1.5586,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.83595695,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"42","last_page":"47"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6331468820571899},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.44762298464775085},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4470920264720917}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6331468820571899},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.44762298464775085},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4470920264720917}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3700666.3700691","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3700666.3700691","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Conference on Bioinformatics Research and Applications","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3700666.3700691","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3700666.3700691","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Conference on Bioinformatics Research and Applications","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W2031095666","https://openalex.org/W2046872827","https://openalex.org/W2050783490","https://openalex.org/W2064675550","https://openalex.org/W2086307871","https://openalex.org/W2122538988","https://openalex.org/W2161811833","https://openalex.org/W2167277498","https://openalex.org/W2295598076","https://openalex.org/W2916373632","https://openalex.org/W2964054038","https://openalex.org/W3009503996","https://openalex.org/W3166142427","https://openalex.org/W4247827554"],"related_works":["https://openalex.org/W2731899572","https://openalex.org/W3215138031","https://openalex.org/W3009238340","https://openalex.org/W4360585206","https://openalex.org/W4321369474","https://openalex.org/W4285208911","https://openalex.org/W3082895349","https://openalex.org/W4213079790","https://openalex.org/W2248239756","https://openalex.org/W3086377361"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
