{"id":"https://openalex.org/W4403536041","doi":"https://doi.org/10.1145/3691620.3695307","title":"The Software Genome Project: Unraveling Software Through Genetic Principles","display_name":"The Software Genome Project: Unraveling Software Through Genetic Principles","publication_year":2024,"publication_date":"2024-10-18","ids":{"openalex":"https://openalex.org/W4403536041","doi":"https://doi.org/10.1145/3691620.3695307"},"language":"en","primary_location":{"id":"doi:10.1145/3691620.3695307","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3691620.3695307","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 39th IEEE/ACM International Conference on Automated Software Engineering","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056381213","display_name":"Yueming Wu","orcid":"https://orcid.org/0000-0002-1515-3558"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yueming Wu","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-1515-3558","affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100319564","display_name":"Chengwei Liu","orcid":"https://orcid.org/0000-0003-1175-2753"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chengwei Liu","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0003-1175-2753","affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049629263","display_name":"Zhengzi Xu","orcid":"https://orcid.org/0000-0002-8390-7518"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Zhengzi Xu","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-8390-7518","affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047814742","display_name":"Lyuye Zhang","orcid":"https://orcid.org/0000-0003-3087-9645"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Lyuye Zhang","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0003-3087-9645","affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107249132","display_name":"Yiran Zhang","orcid":"https://orcid.org/0000-0002-9366-6076"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yiran Zhang","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-9366-6076","affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101266888","display_name":"Zhiling Zhu","orcid":"https://orcid.org/0009-0004-0859-0129"},"institutions":[{"id":"https://openalex.org/I55712492","display_name":"Zhejiang University of Technology","ror":"https://ror.org/02djqfd08","country_code":"CN","type":"education","lineage":["https://openalex.org/I55712492"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiling Zhu","raw_affiliation_strings":["Zhejiang University of Technology, Zhejiang, China"],"raw_orcid":"https://orcid.org/0009-0004-0859-0129","affiliations":[{"raw_affiliation_string":"Zhejiang University of Technology, Zhejiang, China","institution_ids":["https://openalex.org/I55712492"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100355692","display_name":"Yang Liu","orcid":"https://orcid.org/0000-0001-7300-9215"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yang Liu","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0001-7300-9215","affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2041,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.56811088,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"2319","last_page":"2323"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9754999876022339,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9754999876022339,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.967199981212616,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9516000151634216,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6583917737007141},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4987149238586426},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.4833180904388428},{"id":"https://openalex.org/keywords/software-construction","display_name":"Software construction","score":0.4479305148124695},{"id":"https://openalex.org/keywords/software-development","display_name":"Software development","score":0.44532716274261475},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3443510830402374},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2195771336555481},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14189037680625916}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6583917737007141},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4987149238586426},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.4833180904388428},{"id":"https://openalex.org/C186846655","wikidata":"https://www.wikidata.org/wiki/Q3398377","display_name":"Software construction","level":4,"score":0.4479305148124695},{"id":"https://openalex.org/C529173508","wikidata":"https://www.wikidata.org/wiki/Q638608","display_name":"Software development","level":3,"score":0.44532716274261475},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3443510830402374},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2195771336555481},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14189037680625916}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3691620.3695307","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3691620.3695307","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 39th IEEE/ACM International Conference on Automated Software Engineering","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1527911618","https://openalex.org/W1754364391","https://openalex.org/W2010945870","https://openalex.org/W2013532104","https://openalex.org/W2136173752","https://openalex.org/W2732785394","https://openalex.org/W2755050428","https://openalex.org/W2889211678","https://openalex.org/W4224437660","https://openalex.org/W4225108562","https://openalex.org/W4400242613"],"related_works":["https://openalex.org/W4214835859","https://openalex.org/W2476117260","https://openalex.org/W2380017313","https://openalex.org/W2520111506","https://openalex.org/W2359702179","https://openalex.org/W4312927049","https://openalex.org/W2290299503","https://openalex.org/W2183585111","https://openalex.org/W3118244000","https://openalex.org/W2624320237"],"abstract_inverted_index":{"Open-source":[0],"software":[1,38,47,67,71,128,141,158,168,211,219],"is":[2,49,81],"crucial":[3],"to":[4,131,192,206],"modern":[5],"development,":[6],"but":[7,23],"its":[8],"complexity":[9,142],"creates":[10],"challenges":[11],"in":[12],"quality,":[13],"security,":[14],"and":[15,28,73,87,94,97,105,112,134,143,147,150,163,170,217],"management.":[16],"Current":[17],"governance":[18],"approaches":[19],"excel":[20],"at":[21,101,115],"collaboration":[22],"struggle":[24],"with":[25,188],"decentralized":[26],"management":[27],"security.":[29],"With":[30],"the":[31,40,60,66,75,84,120,166,194,208],"rise":[32],"of":[33,46,89,118,127,140,165,196,210],"large":[34],"language":[35],"models":[36],"(LLM)-based":[37],"engineering,":[39],"need":[41],"for":[42,109,198],"a":[43,102,124,137,185],"finer-grained":[44],"understanding":[45,139,164],"composition":[48],"more":[50,214],"urgent":[51],"than":[52],"ever.":[53],"To":[54],"address":[55],"these":[56],"challenges,":[57],"inspired":[58],"by":[59],"Human":[61],"Genome":[62,77],"Project,":[63],"we":[64,203],"treat":[65],"source":[68,178],"code":[69,99],"as":[70,176,184],"DNA":[72],"propose":[74],"Software":[76],"Project":[78],"(SGP),":[79],"which":[80],"geared":[82],"towards":[83,213],"secure":[85],"monitoring":[86],"exploitation":[88],"open-source":[90],"software.":[91],"By":[92,145],"identifying":[93,107],"labeling":[95,191],"integrated":[96],"classified":[98],"features":[100],"fine-grained":[103],"level,":[104],"effectively":[106],"safeguards":[108],"functional":[110,149],"implementations":[111],"nonfunctional":[113],"requirements":[114],"different":[116],"levels":[117],"granularity,":[119],"SGP":[121,153,180,205],"could":[122,154,181],"build":[123],"comprehensive":[125,186],"set":[126],"genome":[129],"maps":[130],"help":[132,155],"developers":[133],"managers":[135],"gain":[136],"deeper":[138],"diversity.":[144],"dissecting":[146],"summarizing":[148],"undesirable":[151],"genes,":[152],"facilitate":[156],"targeted":[157],"optimization,":[159],"provide":[160],"valuable":[161],"insight":[162],"entire":[167],"ecosystem,":[169],"support":[171],"critical":[172],"development":[173,212],"tasks":[174],"such":[175],"open":[177],"governance.":[179],"also":[182],"serve":[183],"dataset":[187],"abundant":[189],"semantic":[190],"enhance":[193],"training":[195],"LLMs":[197],"code.":[199],"Based":[200],"on":[201],"these,":[202],"expect":[204],"drive":[207],"evolution":[209],"efficient,":[215],"reliable,":[216],"sustainable":[218],"solutions.":[220]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
