{"id":"https://openalex.org/W4404470876","doi":"https://doi.org/10.1145/3674658.3674673","title":"Insights into Secondary Mutational Genes in Knockout Strains","display_name":"Insights into Secondary Mutational Genes in Knockout Strains","publication_year":2024,"publication_date":"2024-05-24","ids":{"openalex":"https://openalex.org/W4404470876","doi":"https://doi.org/10.1145/3674658.3674673"},"language":"en","primary_location":{"id":"doi:10.1145/3674658.3674673","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3674658.3674673","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3674658.3674673?download=true","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 16th International Conference on Bioinformatics and Biomedical Technology","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3674658.3674673?download=true","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075348585","display_name":"Yuefan Lin","orcid":"https://orcid.org/0009-0009-4795-418X"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yuefan Lin","raw_affiliation_strings":["Institute of Big Data and Computational Intelligence, Sun Yat-Sen University, GuangZhou, GuangDong, China"],"raw_orcid":"https://orcid.org/0009-0009-4795-418X","affiliations":[{"raw_affiliation_string":"Institute of Big Data and Computational Intelligence, Sun Yat-Sen University, GuangZhou, GuangDong, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103089044","display_name":"Zhiming Dai","orcid":"https://orcid.org/0000-0001-6211-6568"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiming Dai","raw_affiliation_strings":["Institute of Big Data and Computational Intelligence, Sun Yat-Sen University, GuangZhou, GuangDong, China"],"raw_orcid":"https://orcid.org/0000-0001-6211-6568","affiliations":[{"raw_affiliation_string":"Institute of Big Data and Computational Intelligence, Sun Yat-Sen University, GuangZhou, GuangDong, China","institution_ids":["https://openalex.org/I157773358"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5075348585"],"corresponding_institution_ids":["https://openalex.org/I157773358"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.18195153,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"84","last_page":"87"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6559858322143555},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5648330450057983},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4200303256511688},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4004381597042084},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.38649025559425354}],"concepts":[{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6559858322143555},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5648330450057983},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4200303256511688},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4004381597042084},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.38649025559425354}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3674658.3674673","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3674658.3674673","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3674658.3674673?download=true","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 16th International Conference on Bioinformatics and Biomedical Technology","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3674658.3674673","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3674658.3674673","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3674658.3674673?download=true","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2024 16th International Conference on Bioinformatics and Biomedical Technology","raw_type":"proceedings-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.4099999964237213}],"awards":[{"id":"https://openalex.org/G2048960548","display_name":null,"funder_award_id":"23xkjc003","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G2975495448","display_name":null,"funder_award_id":"92249303","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3757930179","display_name":null,"funder_award_id":"23xkjc003","funder_id":"https://openalex.org/F4320321160","funder_display_name":"Sun Yat-sen University"},{"id":"https://openalex.org/G6335531921","display_name":null,"funder_award_id":"2023A1515011907","funder_id":"https://openalex.org/F4320321921","funder_display_name":"Natural Science Foundation of Guangdong Province"},{"id":"https://openalex.org/G6990152100","display_name":null,"funder_award_id":"61872395","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321160","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71"},{"id":"https://openalex.org/F4320321921","display_name":"Natural Science Foundation of Guangdong Province","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4404470876.pdf","grobid_xml":"https://content.openalex.org/works/W4404470876.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1527927437","https://openalex.org/W1535354154","https://openalex.org/W1966985102","https://openalex.org/W1994267372","https://openalex.org/W2099636105","https://openalex.org/W2127073167","https://openalex.org/W2130727331","https://openalex.org/W2134597218","https://openalex.org/W2142437744","https://openalex.org/W2144746718","https://openalex.org/W2145619687","https://openalex.org/W2148860972","https://openalex.org/W2163082684","https://openalex.org/W2546667113","https://openalex.org/W2973040234","https://openalex.org/W2993251899","https://openalex.org/W3088048423","https://openalex.org/W4226329091"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2034625591"],"abstract_inverted_index":{"Deleting":[0],"single":[1],"gene":[2,8],"can":[3],"cause":[4],"secondary":[5,11,30,35,88],"mutations":[6,12],"and":[7,57,62,90],"expression":[9],"changes.Recently,":[10],"were":[13],"profiled":[14],"for":[15,27,84,91],"over":[16],"4,000":[17],"Saccharomyces":[18],"cerevisiae":[19],"knockout":[20,41,69],"strains.These":[21],"valuable":[22],"data":[23],"provide":[24,82],"an":[25],"opportunity":[26],"insights":[28],"into":[29],"mutational":[31,36,60],"genes.We":[32],"found":[33],"that":[34],"genes":[37,61,65],"in":[38,52,66,76],"the":[39,47,53,67,77,85,92],"same":[40,48,54,68,78],"strain":[42,70],"tend":[43],"to":[44,74],"be":[45,50],"on":[46,87],"chromosome,":[49],"involved":[51],"biological":[55,79],"process":[56],"show":[58,71],"co-evolution.Secondary":[59],"differentially":[63],"expressed":[64],"a":[72],"tendency":[73],"participate":[75],"process.These":[80],"results":[81],"implication":[83],"constraints":[86],"mutations,":[89],"underlying":[93],"functions":[94],"of":[95],"deleted":[96],"genes.":[97]},"counts_by_year":[],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
