{"id":"https://openalex.org/W4401213599","doi":"https://doi.org/10.1145/3638530.3654208","title":"Runtime phylogenetic analysis enables extreme subsampling for test-based problems","display_name":"Runtime phylogenetic analysis enables extreme subsampling for test-based problems","publication_year":2024,"publication_date":"2024-07-14","ids":{"openalex":"https://openalex.org/W4401213599","doi":"https://doi.org/10.1145/3638530.3654208"},"language":"en","primary_location":{"id":"doi:10.1145/3638530.3654208","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3638530.3654208","pdf_url":null,"source":{"id":"https://openalex.org/S4363608771","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008242968","display_name":"Alexander Lalejini","orcid":"https://orcid.org/0000-0003-0994-2718"},"institutions":[{"id":"https://openalex.org/I8606887","display_name":"Grand Valley State University","ror":"https://ror.org/001m1hv61","country_code":"US","type":"education","lineage":["https://openalex.org/I8606887"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Alexander Lalejini","raw_affiliation_strings":["Grand Valley State University, Allendale, United States of America"],"affiliations":[{"raw_affiliation_string":"Grand Valley State University, Allendale, United States of America","institution_ids":["https://openalex.org/I8606887"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093868476","display_name":"Marcos Sanson","orcid":"https://orcid.org/0009-0001-3595-4387"},"institutions":[{"id":"https://openalex.org/I8606887","display_name":"Grand Valley State University","ror":"https://ror.org/001m1hv61","country_code":"US","type":"education","lineage":["https://openalex.org/I8606887"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcos Sanson","raw_affiliation_strings":["Grand Valley State University, Allendale, United States of America"],"affiliations":[{"raw_affiliation_string":"Grand Valley State University, Allendale, United States of America","institution_ids":["https://openalex.org/I8606887"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093868477","display_name":"Jack Garbus","orcid":"https://orcid.org/0009-0004-5494-0038"},"institutions":[{"id":"https://openalex.org/I6902469","display_name":"Brandeis University","ror":"https://ror.org/05abbep66","country_code":"US","type":"education","lineage":["https://openalex.org/I6902469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jack Garbus","raw_affiliation_strings":["Brandeis University, Waltham, United States of America"],"affiliations":[{"raw_affiliation_string":"Brandeis University, Waltham, United States of America","institution_ids":["https://openalex.org/I6902469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041111645","display_name":"Matthew Andres Moreno","orcid":"https://orcid.org/0000-0003-4726-4479"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Andres Moreno","raw_affiliation_strings":["University of Michigan, Ann Arbor, United States of America"],"affiliations":[{"raw_affiliation_string":"University of Michigan, Ann Arbor, United States of America","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039490105","display_name":"Emily Dolson","orcid":"https://orcid.org/0000-0001-8616-4898"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emily Dolson","raw_affiliation_strings":["Michigan State University, East Lansing, United States of America"],"affiliations":[{"raw_affiliation_string":"Michigan State University, East Lansing, United States of America","institution_ids":["https://openalex.org/I87216513"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5008242968"],"corresponding_institution_ids":["https://openalex.org/I8606887"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.11303891,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"511","last_page":"514"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9757000207901001,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10743","display_name":"Software Testing and Debugging Techniques","score":0.9707000255584717,"subfield":{"id":"https://openalex.org/subfields/1712","display_name":"Software"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6872549653053284},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.49805498123168945},{"id":"https://openalex.org/keywords/test","display_name":"Test (biology)","score":0.4308871328830719},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10031723976135254},{"id":"https://openalex.org/keywords/paleontology","display_name":"Paleontology","score":0.0658746063709259}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6872549653053284},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.49805498123168945},{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.4308871328830719},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10031723976135254},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0658746063709259},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3638530.3654208","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3638530.3654208","pdf_url":null,"source":{"id":"https://openalex.org/S4363608771","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1978661986","https://openalex.org/W2034068348","https://openalex.org/W2122530616","https://openalex.org/W2343489328","https://openalex.org/W2797123983","https://openalex.org/W2945779572","https://openalex.org/W3023345483","https://openalex.org/W3098500079","https://openalex.org/W3103943707","https://openalex.org/W3173383004","https://openalex.org/W3198225904","https://openalex.org/W4285805324","https://openalex.org/W4289765664","https://openalex.org/W4391214443","https://openalex.org/W4391556768","https://openalex.org/W4393107044","https://openalex.org/W6911201477"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4312203868","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890"],"abstract_inverted_index":{"A":[0],"phylogeny":[1],"describes":[2],"a":[3,19,30,129],"population's":[4,20],"evolutionary":[5,136],"history.":[6],"Evolutionary":[7],"search":[8,24],"algorithms":[9],"can":[10],"perfectly":[11],"track":[12],"the":[13,23],"ancestry":[14],"of":[15,33,124],"candidate":[16],"solutions,":[17],"illuminating":[18],"trajectory":[21],"through":[22],"space.":[25],"We":[26],"introduce":[27],"phylogeny-informed":[28,49,71,88,110,125],"subsampling,":[29],"new":[31,131],"class":[32],"subsampling":[34,50,53,72,79,83,89,108,111,118,126],"methods":[35,73,84,90],"that":[36,70],"exploit":[37],"runtime":[38],"phylogenetic":[39],"analyses":[40],"for":[41,133],"solving":[42],"test-based":[43],"problems.":[44,121],"Specifically,":[45],"we":[46,68],"assess":[47],"two":[48],"methods---individualized":[51],"random":[52,117],"and":[54],"ancestor-based":[55],"subsampling---on":[56],"ten":[57],"genetic":[58],"programming":[59],"(GP)":[60],"problems":[61,96,140],"from":[62],"program":[63,94],"synthesis":[64,95],"benchmark":[65],"suites.":[66],"Overall,":[67],"find":[69],"enable":[74],"problem-solving":[75],"success":[76],"at":[77,106],"extreme":[78],"levels":[80],"where":[81],"other":[82],"fail.":[85],"For":[86],"example,":[87],"more":[91],"reliably":[92],"solved":[93],"when":[97],"evaluating":[98],"just":[99],"one":[100],"training":[101],"case":[102],"per-individual,":[103],"per-generation.":[104],"However,":[105],"moderate":[107],"levels,":[109],"generally":[112],"performed":[113],"no":[114],"better":[115],"than":[116],"on":[119],"GP":[120],"Continued":[122],"refinements":[123],"techniques":[127],"offer":[128],"promising":[130],"direction":[132],"scaling":[134],"up":[135],"systems":[137],"to":[138],"handle":[139],"with":[141],"many":[142],"expensive-to-evaluate":[143],"fitness":[144],"criteria.":[145]},"counts_by_year":[],"updated_date":"2025-12-26T23:08:49.675405","created_date":"2025-10-10T00:00:00"}