{"id":"https://openalex.org/W4400611521","doi":"https://doi.org/10.1145/3637528.3671642","title":"Chromosomal Structural Abnormality Diagnosis by Homologous Similarity","display_name":"Chromosomal Structural Abnormality Diagnosis by Homologous Similarity","publication_year":2024,"publication_date":"2024-08-24","ids":{"openalex":"https://openalex.org/W4400611521","doi":"https://doi.org/10.1145/3637528.3671642"},"language":"en","primary_location":{"id":"doi:10.1145/3637528.3671642","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3637528.3671642","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},"type":"article","indexed_in":["arxiv","crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2407.08204","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087646019","display_name":"Juren Li","orcid":"https://orcid.org/0000-0001-8511-9921"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Juren Li","raw_affiliation_strings":["Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007968109","display_name":"F. Q. Fu","orcid":"https://orcid.org/0000-0003-0909-6478"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fanzhe Fu","raw_affiliation_strings":["Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Ran Wei","orcid":"https://orcid.org/0009-0005-9324-3419"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ran Wei","raw_affiliation_strings":["Hangzhou Diagens Biotechnology Co., Ltd., Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Hangzhou Diagens Biotechnology Co., Ltd., Hangzhou, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100580871","display_name":"Yifei Sun","orcid":"https://orcid.org/0000-0002-6814-5527"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yifei Sun","raw_affiliation_strings":["Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Zeyu Lai","orcid":"https://orcid.org/0009-0008-3416-1650"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zeyu Lai","raw_affiliation_strings":["Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091832942","display_name":"Ning Song","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ning Song","raw_affiliation_strings":["Hangzhou Diagens Biotechnology Co., Ltd., Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Hangzhou Diagens Biotechnology Co., Ltd., Hangzhou, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xin Chen","orcid":"https://orcid.org/0009-0000-0169-4831"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Chen","raw_affiliation_strings":["Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035227503","display_name":"Yang Yang","orcid":"https://orcid.org/0000-0002-5058-4417"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Yang","raw_affiliation_strings":["Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5087646019"],"corresponding_institution_ids":["https://openalex.org/I76130692"],"apc_list":null,"apc_paid":null,"fwci":0.3356,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.63827736,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"5317","last_page":"5328"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11512","display_name":"Anomaly Detection Techniques and Applications","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11512","display_name":"Anomaly Detection Techniques and Applications","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.982699990272522,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/abnormality","display_name":"Abnormality","score":0.7595524787902832},{"id":"https://openalex.org/keywords/homologous-chromosome","display_name":"Homologous chromosome","score":0.721937358379364},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6027539372444153},{"id":"https://openalex.org/keywords/chromosomal-abnormality","display_name":"Chromosomal Abnormality","score":0.5272140502929688},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5092591047286987},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45618218183517456},{"id":"https://openalex.org/keywords/structural-similarity","display_name":"Structural similarity","score":0.4308684468269348},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3325914740562439},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.3005679249763489},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2760257124900818},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23159927129745483},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17541319131851196},{"id":"https://openalex.org/keywords/karyotype","display_name":"Karyotype","score":0.14425981044769287},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11388373374938965}],"concepts":[{"id":"https://openalex.org/C50965678","wikidata":"https://www.wikidata.org/wiki/Q2724302","display_name":"Abnormality","level":2,"score":0.7595524787902832},{"id":"https://openalex.org/C64894306","wikidata":"https://www.wikidata.org/wiki/Q849622","display_name":"Homologous chromosome","level":3,"score":0.721937358379364},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6027539372444153},{"id":"https://openalex.org/C2908755955","wikidata":"https://www.wikidata.org/wiki/Q744962","display_name":"Chromosomal Abnormality","level":5,"score":0.5272140502929688},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5092591047286987},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45618218183517456},{"id":"https://openalex.org/C139489369","wikidata":"https://www.wikidata.org/wiki/Q770846","display_name":"Structural similarity","level":2,"score":0.4308684468269348},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3325914740562439},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.3005679249763489},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2760257124900818},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23159927129745483},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17541319131851196},{"id":"https://openalex.org/C53226629","wikidata":"https://www.wikidata.org/wiki/Q189967","display_name":"Karyotype","level":4,"score":0.14425981044769287},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11388373374938965},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/3637528.3671642","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3637528.3671642","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:2407.08204","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2407.08204","pdf_url":"https://arxiv.org/pdf/2407.08204","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2407.08204","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2407.08204","pdf_url":"https://arxiv.org/pdf/2407.08204","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2504063345","display_name":null,"funder_award_id":"6244160","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4781067941","display_name":null,"funder_award_id":"62176233","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5227875867","display_name":null,"funder_award_id":"62441605","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6058138561","display_name":null,"funder_award_id":", No.","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4400611521.pdf","grobid_xml":"https://content.openalex.org/works/W4400611521.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W187043655","https://openalex.org/W1505062451","https://openalex.org/W1551874820","https://openalex.org/W1554946929","https://openalex.org/W1586320514","https://openalex.org/W1968263047","https://openalex.org/W2002519702","https://openalex.org/W2011759359","https://openalex.org/W2015887370","https://openalex.org/W2035307098","https://openalex.org/W2035642462","https://openalex.org/W2048512322","https://openalex.org/W2061240327","https://openalex.org/W2083875259","https://openalex.org/W2091744258","https://openalex.org/W2111922552","https://openalex.org/W2151392117","https://openalex.org/W2194775991","https://openalex.org/W2340896621","https://openalex.org/W2531409750","https://openalex.org/W2599354622","https://openalex.org/W2736090641","https://openalex.org/W2793062918","https://openalex.org/W2902758299","https://openalex.org/W2905867642","https://openalex.org/W2914570111","https://openalex.org/W2936503027","https://openalex.org/W2963061824","https://openalex.org/W2963445059","https://openalex.org/W2963446712","https://openalex.org/W2997591727","https://openalex.org/W3013377280","https://openalex.org/W3034706449","https://openalex.org/W3089028909","https://openalex.org/W3129166376","https://openalex.org/W4235230959","https://openalex.org/W4237212972","https://openalex.org/W4251038717","https://openalex.org/W4254182148","https://openalex.org/W4280545892","https://openalex.org/W4290944046","https://openalex.org/W4323654994","https://openalex.org/W6757844995","https://openalex.org/W6806897259"],"related_works":["https://openalex.org/W2379137360","https://openalex.org/W2465244493","https://openalex.org/W2352947674","https://openalex.org/W2155310355","https://openalex.org/W2384235318","https://openalex.org/W2333064344","https://openalex.org/W2379490669","https://openalex.org/W2080628332","https://openalex.org/W3028882978","https://openalex.org/W2355422114"],"abstract_inverted_index":{"Pathogenic":[0],"chromosome":[1,12,21,45,63,67],"abnormalities":[2,13,22,106],"are":[3,23],"very":[4],"common":[5],"among":[6],"the":[7,42,48,70,85,112,143],"general":[8],"population.":[9],"While":[10],"numerical":[11],"can":[14],"be":[15],"quickly":[16],"and":[17,27,47,64,103,133],"precisely":[18],"detected,":[19],"structural":[20,53,105],"far":[24],"more":[25],"complex":[26],"typically":[28],"require":[29],"considerable":[30],"efforts":[31],"by":[32,111],"human":[33,115],"experts":[34],"for":[35],"identification.":[36],"This":[37],"paper":[38],"focuses":[39],"on":[40,60,139],"investigating":[41],"modeling":[43],"of":[44,50,73,89,114,124,145],"features":[46],"identification":[49],"chromosomes":[51,80,102,126],"with":[52,84],"abnormalities.":[54],"Most":[55],"existing":[56],"data-driven":[57],"methods":[58],"concentrate":[59],"a":[61],"single":[62],"consider":[65],"each":[66],"independently,":[68],"overlooking":[69],"crucial":[71],"aspect":[72],"homologous":[74,79,101,108,125],"chromosomes.":[75],"In":[76],"normal":[77],"cases,":[78],"share":[81],"identical":[82],"structures,":[83],"exception":[86],"that":[87],"one":[88],"them":[90],"is":[91],"abnormal.":[92],"Therefore,":[93],"we":[94,118],"propose":[95],"an":[96],"adaptive":[97],"method":[98],"to":[99,129,149],"align":[100],"diagnose":[104],"through":[107],"similarity.":[109],"Inspired":[110],"process":[113],"expert":[116],"diagnosis,":[117],"incorporate":[119],"information":[120],"from":[121],"multiple":[122],"pairs":[123],"simultaneously,":[127],"aiming":[128],"reduce":[130],"noise":[131],"disturbance":[132],"improve":[134],"prediction":[135],"performance.":[136],"Extensive":[137],"experiments":[138],"real-world":[140],"datasets":[141],"validate":[142],"effectiveness":[144],"our":[146],"model":[147],"compared":[148],"baselines.":[150]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}
